DK955458
Clone id TST39A01NGRL0023_C10
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_C10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
TGCTCTTGCGTGCTCTCGCGCCCCTTACCTTTGCGTGTCCTCAGGTCTTTTGCGAGCTTG
TGCCAACTCTTCCGCCTCTTTCATGGGTTAGTGCAGGAATTCTCTTGAACATCACCGTTC
GCCTTGGCTTGGCATGAATTTGGATATGGCGATTGCCACCTTTTCGTCATCCTCGGCCCA
GAATCTCTGTGTGTGCTTGGCACCATCGCAGCATGGTAACTTGTCACGAAGTAGCAATCC
CTGCAAAAACTACGAGCGCTTACGAAGGCTTGCAAAGTCATGGGTTGAAGGTGAGGGTGT
CTCTTTACGCAAAGCAGTGGATAGCAAAGCCTACGAGACACTGCATGGAGTAATGAAGCC
CGGGGTGAGGACTTTGAATTGTCGAGCTGAGCTTGAGTGGCTGGATCATTTGATGCTAGC
AGTGGGTGTTGGGCTTCCTTGTACCGTGATGGAATGCGGGGATGTCGTTTACAGAAGTAC
TCTACCACGCTCGAATGCCCTCAACATTACACCCCCTGGTGTTCTTCTCACACTCTTTGT
GGCATCCTACCTTTGGGCC
■■Homology search results ■■ -
sp_hit_id Q9S713
Definition sp|Q9S713|STT7_ARATH Serine/threonine-protein kinase SNT7, chloroplastic OS=Arabidopsis thaliana
Align length 70
Score (bit) 86.7
E-value 7.0e-17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955458|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_C10, 5'
(559 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9S713|STT7_ARATH Serine/threonine-protein kinase SNT7, chlor... 87 7e-17
sp|Q84V18|STT7_CHLRE Serine/threonine-protein kinase stt7, chlor... 40 0.010
sp|A2A690|TANC2_MOUSE Protein TANC2 OS=Mus musculus GN=Tanc2 PE=... 34 0.42
sp|Q9HCD6|TANC2_HUMAN Protein TANC2 OS=Homo sapiens GN=TANC2 PE=... 34 0.42
sp|P11716|RYR1_RABIT Ryanodine receptor 1 OS=Oryctolagus cunicul... 33 0.73
sp|Q5XG71|UTP20_MOUSE Small subunit processome component 20 homo... 33 1.2
sp|Q92502|STAR8_HUMAN StAR-related lipid transfer protein 8 OS=H... 30 6.2
sp|Q88DC4|RSGA_PSEPK Putative ribosome biogenesis GTPase rsgA OS... 30 8.0
sp|O13067|CND2_XENLA Condensin complex subunit 2 OS=Xenopus laev... 30 8.1

>sp|Q9S713|STT7_ARATH Serine/threonine-protein kinase SNT7,
chloroplastic OS=Arabidopsis thaliana GN=SNT7 PE=1 SV=1
Length = 562

Score = 86.7 bits (213), Expect = 7e-17
Identities = 43/70 (61%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Frame = +2

Query: 356 KPGVR-TLNCRAEL-EWLDHLMLAVGVGLPCTVMECGDVVYRSTLPRSNALNITPPGVLL 529
KP V+ +CRA+L + + +L + VGVGLPCTVMECGD++YRSTLP+SN L IT PGV L
Sbjct: 35 KPTVKLNSSCRAQLIDTVHNLFIGVGVGLPCTVMECGDMIYRSTLPKSNGLTITAPGVAL 94

Query: 530 TLFVASYLWA 559
L SYLWA
Sbjct: 95 ALTALSYLWA 104


>sp|Q84V18|STT7_CHLRE Serine/threonine-protein kinase stt7,
chloroplastic OS=Chlamydomonas reinhardtii GN=STT7 PE=2
SV=1
Length = 754

Score = 39.7 bits (91), Expect = 0.010
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Frame = +2

Query: 356 KPGVRT-LNCRAELEWLDHLMLAVG------VGLPCTVMECGDVVYRSTLPRS--NALNI 508
+PG R + RA E++D L V + PC VM+CGD+VYRSTL S N
Sbjct: 33 RPGQRRGVPARATPEFIDALSALVPNLPLEQIAAPCQVMKCGDIVYRSTLDPSLYNEAGF 92

Query: 509 TPPGVLLTLFVASYLW 556
V L V +YL+
Sbjct: 93 DEKTVALLAPVLAYLF 108


>sp|A2A690|TANC2_MOUSE Protein TANC2 OS=Mus musculus GN=Tanc2 PE=1
SV=1
Length = 1994

Score = 34.3 bits (77), Expect = 0.42
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = -3

Query: 497 HSSVVEYFCKRHPRIPSRYKEAQHPLLASNDPATQAQLDNSKSSPRASLLHAVSRRLC-Y 321
HSS+ C P + R +EA L + Q DN+ + +H V+ LC
Sbjct: 423 HSSITSGSCPGTPEMRRRQEEAMRRLASQVVAYHYCQADNAYTCLVPEFVHNVAALLCRS 482

Query: 320 PLLCVKRHPHLQPMTLQAFVSARSFCRD 237
P L R L+ LQ+ +S RS +D
Sbjct: 483 PQLTAYREQLLREPHLQSMLSLRSCVQD 510


>sp|Q9HCD6|TANC2_HUMAN Protein TANC2 OS=Homo sapiens GN=TANC2 PE=1
SV=3
Length = 1990

Score = 34.3 bits (77), Expect = 0.42
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = -3

Query: 497 HSSVVEYFCKRHPRIPSRYKEAQHPLLASNDPATQAQLDNSKSSPRASLLHAVSRRLC-Y 321
HSS+ C P + R +EA L + Q DN+ + +H V+ LC
Sbjct: 423 HSSITSGSCPGTPEMRRRQEEAMRRLASQVVAYHYCQADNAYTCLVPEFVHNVAALLCRS 482

Query: 320 PLLCVKRHPHLQPMTLQAFVSARSFCRD 237
P L R L+ LQ+ +S RS +D
Sbjct: 483 PQLTAYREQLLREPHLQSMLSLRSCVQD 510


>sp|P11716|RYR1_RABIT Ryanodine receptor 1 OS=Oryctolagus cuniculus
GN=RYR1 PE=1 SV=1
Length = 5037

Score = 33.5 bits (75), Expect = 0.73
Identities = 22/58 (37%), Positives = 28/58 (48%)
Frame = +2

Query: 224 SRSSNPCKNYERLRRLAKSWVEGEGVSLRKAVDSKAYETLHGVMKPGVRTLNCRAELE 397
+R++ P +YE LRR A W E EG A + T G +PGV RAE E
Sbjct: 1323 ARAAEPDPDYENLRRSAGGWGEAEGGKEGTAKEG----TPGGTPQPGVEAQPVRAENE 1376


>sp|Q5XG71|UTP20_MOUSE Small subunit processome component 20 homolog
OS=Mus musculus GN=Utp20 PE=2 SV=2
Length = 2788

Score = 32.7 bits (73), Expect = 1.2
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Frame = +2

Query: 218 NLSRSSNPCKNYERLRRLAKSWV----EGEGVSLRKAVDSKAYETLHGVMKPGVRT---- 373
N +N C+N E++RRL ++++ G G + + D + GV+ ++T
Sbjct: 305 NKVTEANCCENSEQMRRLLETYLIVVKHGSGSKITRPAD------VCGVLSEALQTASLS 358

Query: 374 LNCRAE-LEWLDHLMLAVGVGLPCT-VMECGDVVYRSTLPRSNALNIT 511
+CR L+ + L+LA V LP T + E + V+ S R + L+ +
Sbjct: 359 TSCRKTLLDVVSALLLAENVSLPETLIKETVEKVFESKFERRSVLDFS 406


>sp|Q92502|STAR8_HUMAN StAR-related lipid transfer protein 8 OS=Homo
sapiens GN=STARD8 PE=1 SV=2
Length = 1023

Score = 30.4 bits (67), Expect = 6.2
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2

Query: 143 DMAIATFSSSSAQNLCVCLAPS-QHGNLSRSSNPCKNYERLRRL 271
D+A A + +A NL VCLAPS H N+S+ +P + R L
Sbjct: 704 DIASAEENQMTAGNLAVCLAPSIFHLNVSKKDSPSPRIKSKRSL 747


>sp|Q88DC4|RSGA_PSEPK Putative ribosome biogenesis GTPase rsgA
OS=Pseudomonas putida (strain KT2440) GN=rsgA PE=3 SV=1
Length = 343

Score = 30.0 bits (66), Expect = 8.0
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = -3

Query: 464 HPRIPSRYK-EAQH----PLLASNDPATQAQLDNSKSSPRASLLHAVSRRLCYPLLCVKR 300
HP + RY A+H PLL N +A L N ++ P L V R L YPLL V
Sbjct: 140 HPNLIDRYLVAAEHAGLRPLLLLN----KADLINDENGPGLHALLEVYRELGYPLLEVSA 195

Query: 299 H 297
H
Sbjct: 196 H 196


>sp|O13067|CND2_XENLA Condensin complex subunit 2 OS=Xenopus laevis
GN=ncaph PE=1 SV=1
Length = 699

Score = 30.0 bits (66), Expect = 8.1
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -2

Query: 324 LSTALRKETPSPSTHDFASLRKRS*FLQGLLLRDKLPCCDGAKHTQRFWAED--DEKVAI 151
LSTA E PSP + D L +S FLQ + R P G + Q W D +E +++
Sbjct: 269 LSTAEETEPPSPGSMDSTEL--KSLFLQCVEKRPLCPSLSGFRFMQ--WNSDAQNENLSL 324

Query: 150 AISKFMPS 127
+ KF S
Sbjct: 325 LMDKFKKS 332


tr_hit_id A9T3J7
Definition tr|A9T3J7|A9T3J7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 100
Score (bit) 84.0
E-value 5.0e-15
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955458|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_C10, 5'
(559 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9T3J7|A9T3J7_PHYPA Predicted protein OS=Physcomitrella paten... 84 5e-15
tr|A7P333|A7P333_VITVI Chromosome chr1 scaffold_5, whole genome ... 81 4e-14
tr|A5B8U6|A5B8U6_VITVI Putative uncharacterized protein OS=Vitis... 81 4e-14
tr|Q0DG76|Q0DG76_ORYSJ Os05g0549100 protein OS=Oryza sativa subs... 78 3e-13
tr|B8AWA3|B8AWA3_ORYSI Putative uncharacterized protein OS=Oryza... 78 3e-13
tr|A3B6I3|A3B6I3_ORYSJ Putative uncharacterized protein OS=Oryza... 78 3e-13
tr|B6SXS7|B6SXS7_MAIZE Serine/threonine-protein kinase SNT7 OS=Z... 78 4e-13
tr|B4FVB8|B4FVB8_MAIZE Putative uncharacterized protein OS=Zea m... 55 2e-06
tr|A9SRW8|A9SRW8_PHYPA Predicted protein OS=Physcomitrella paten... 54 6e-06
tr|A4S3P1|A4S3P1_OSTLU LHCII kinase OS=Ostreococcus lucimarinus ... 49 2e-04
tr|Q010B4|Q010B4_OSTTA Ca2+/calmodulin-dependent protein kinase,... 45 0.003
tr|B6MJH6|B6MJH6_BRAFL Putative uncharacterized protein OS=Branc... 40 0.11
tr|B6PQ47|B6PQ47_BRAFL Putative uncharacterized protein OS=Branc... 38 0.42
tr|B8C105|B8C105_THAPS Predicted protein OS=Thalassiosira pseudo... 37 0.73
tr|B6MDL4|B6MDL4_BRAFL Putative uncharacterized protein OS=Branc... 36 1.6
tr|B6L7U2|B6L7U2_BRAFL Putative uncharacterized protein OS=Branc... 36 1.6
tr|B6L7I6|B6L7I6_BRAFL Putative uncharacterized protein OS=Branc... 36 1.6
tr|B6MUR0|B6MUR0_BRAFL Putative uncharacterized protein OS=Branc... 35 2.7
tr|B6PWH8|B6PWH8_BRAFL Putative uncharacterized protein OS=Branc... 35 3.6
tr|B6MUR2|B6MUR2_BRAFL Putative uncharacterized protein OS=Branc... 35 3.6
tr|B6MJZ6|B6MJZ6_BRAFL Putative uncharacterized protein OS=Branc... 35 3.6
tr|B6L678|B6L678_BRAFL Putative uncharacterized protein OS=Branc... 35 3.6
tr|Q9LEY4|Q9LEY4_ARATH Putative uncharacterized protein T22D6_17... 35 3.6
tr|A2A689|A2A689_MOUSE Tetratricopeptide repeat, ankyrin repeat ... 34 4.6
tr|B6PWJ7|B6PWJ7_BRAFL Putative uncharacterized protein (Fragmen... 34 6.1
tr|B6NQS9|B6NQS9_BRAFL Putative uncharacterized protein OS=Branc... 34 6.1
tr|B6L8B5|B6L8B5_BRAFL Putative uncharacterized protein OS=Branc... 34 6.1
tr|Q6AUF9|Q6AUF9_ORYSJ Os05g0564300 protein OS=Oryza sativa subs... 34 6.2
tr|B8AWR5|B8AWR5_ORYSI Putative uncharacterized protein OS=Oryza... 34 6.2
tr|A1CAL9|A1CAL9_ASPCL Putative uncharacterized protein OS=Asper... 34 6.2

>tr|A9T3J7|A9T3J7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_191307 PE=4 SV=1
Length = 593

Score = 84.0 bits (206), Expect = 5e-15
Identities = 47/100 (47%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Frame = +2

Query: 263 RRLAKSWVEGEGVSLRKAVDSKAYETLHGVMKPGVRTLNCRAEL-EWLDHLMLAVGVGLP 439
++L W G G+ LR V + G + + + EL E L L++ VGVGLP
Sbjct: 36 QKLVGQWPRGLGLGLR--VVGRGLSVRRGTSRRAIVRVRASFELAEHLHGLVVGVGVGLP 93

Query: 440 CTVMECGDVVYRSTLPRSNALNITPPGVLLTLFVASYLWA 559
CTVMECGDVVYRSTLPR IT PGV LT+ + +YLWA
Sbjct: 94 CTVMECGDVVYRSTLPR-QGFQITTPGVALTVLIVTYLWA 132


>tr|A7P333|A7P333_VITVI Chromosome chr1 scaffold_5, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00030286001
PE=4 SV=1
Length = 573

Score = 80.9 bits (198), Expect = 4e-14
Identities = 40/71 (56%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Frame = +2

Query: 356 KPGVRTLNCRAE---LEWLDHLMLAVGVGLPCTVMECGDVVYRSTLPRSNALNITPPGVL 526
K V L C A + + L VGVGLPCTVMECGD++YRSTLPRSN L +T PG +
Sbjct: 45 KKAVSNLVCAAGGGFFNLVHDVFLGVGVGLPCTVMECGDIIYRSTLPRSNGLTLTAPGAI 104

Query: 527 LTLFVASYLWA 559
L L SYLWA
Sbjct: 105 LALGALSYLWA 115


>tr|A5B8U6|A5B8U6_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_028784 PE=4 SV=1
Length = 555

Score = 80.9 bits (198), Expect = 4e-14
Identities = 40/71 (56%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Frame = +2

Query: 356 KPGVRTLNCRAE---LEWLDHLMLAVGVGLPCTVMECGDVVYRSTLPRSNALNITPPGVL 526
K V L C A + + L VGVGLPCTVMECGD++YRSTLPRSN L +T PG +
Sbjct: 26 KKAVSNLVCAAGGGFFNLVHDVFLGVGVGLPCTVMECGDIIYRSTLPRSNGLTLTAPGAI 85

Query: 527 LTLFVASYLWA 559
L L SYLWA
Sbjct: 86 LALGALSYLWA 96


>tr|Q0DG76|Q0DG76_ORYSJ Os05g0549100 protein OS=Oryza sativa subsp.
japonica GN=Os05g0549100 PE=4 SV=1
Length = 559

Score = 78.2 bits (191), Expect = 3e-13
Identities = 36/50 (72%), Positives = 41/50 (82%)
Frame = +2

Query: 410 LMLAVGVGLPCTVMECGDVVYRSTLPRSNALNITPPGVLLTLFVASYLWA 559
L+ AVGVGLPCTVM CGDV+YRSTLPR++ L IT PGV L L ASYLW+
Sbjct: 50 LVEAVGVGLPCTVMACGDVIYRSTLPRNDGLTITAPGVALALAAASYLWS 99


>tr|B8AWA3|B8AWA3_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_20870 PE=4 SV=1
Length = 559

Score = 78.2 bits (191), Expect = 3e-13
Identities = 36/50 (72%), Positives = 41/50 (82%)
Frame = +2

Query: 410 LMLAVGVGLPCTVMECGDVVYRSTLPRSNALNITPPGVLLTLFVASYLWA 559
L+ AVGVGLPCTVM CGDV+YRSTLPR++ L IT PGV L L ASYLW+
Sbjct: 50 LVEAVGVGLPCTVMACGDVIYRSTLPRNDGLTITAPGVALALAAASYLWS 99


>tr|A3B6I3|A3B6I3_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_018655 PE=4 SV=1
Length = 585

Score = 78.2 bits (191), Expect = 3e-13
Identities = 36/50 (72%), Positives = 41/50 (82%)
Frame = +2

Query: 410 LMLAVGVGLPCTVMECGDVVYRSTLPRSNALNITPPGVLLTLFVASYLWA 559
L+ AVGVGLPCTVM CGDV+YRSTLPR++ L IT PGV L L ASYLW+
Sbjct: 50 LVEAVGVGLPCTVMACGDVIYRSTLPRNDGLTITAPGVALALAAASYLWS 99


>tr|B6SXS7|B6SXS7_MAIZE Serine/threonine-protein kinase SNT7 OS=Zea
mays PE=2 SV=1
Length = 562

Score = 77.8 bits (190), Expect = 4e-13
Identities = 35/50 (70%), Positives = 41/50 (82%)
Frame = +2

Query: 410 LMLAVGVGLPCTVMECGDVVYRSTLPRSNALNITPPGVLLTLFVASYLWA 559
L+ AVGVGLPCTVM+CGDV+YRSTLPR++ L IT PGV L L SYLW+
Sbjct: 53 LVEAVGVGLPCTVMQCGDVIYRSTLPRNDGLTITAPGVTLALATVSYLWS 102


>tr|B4FVB8|B4FVB8_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 497

Score = 55.5 bits (132), Expect = 2e-06
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +2

Query: 449 MECGDVVYRSTLPRSNALNITPPGVLLTLFVASYLWA 559
M+CGDV+YRSTLPR++ L IT PG+ L L SYLW+
Sbjct: 1 MQCGDVIYRSTLPRNDGLTITAPGLTLALATVSYLWS 37


>tr|A9SRW8|A9SRW8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_187748 PE=4 SV=1
Length = 497

Score = 53.9 bits (128), Expect = 6e-06
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +2

Query: 449 MECGDVVYRSTLPRSNALNITPPGVLLTLFVASYLWA 559
MECGDVVYRSTLPR IT PGV LT+ + +YLWA
Sbjct: 1 MECGDVVYRSTLPR-QGFQITTPGVALTVLIVTYLWA 36


>tr|A4S3P1|A4S3P1_OSTLU LHCII kinase OS=Ostreococcus lucimarinus
(strain CCE9901) GN=STT7 PE=4 SV=1
Length = 612

Score = 48.9 bits (115), Expect = 2e-04
Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Frame = +2

Query: 416 LAVGVGLPCTVMECGDVVYRSTLP----RSNALNITPPGVLLTLFVASY 550
+AVGVGLPCTV CGD +YRSTL R A +TP G + A+Y
Sbjct: 80 VAVGVGLPCTVQNCGDAIYRSTLDAELRREIAPLLTPVGATILAVAATY 128