DK955463
Clone id TST39A01NGRL0023_C15
Library
Length 551
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_C15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GGAGTGGTGTTGGGCGGTGGTGGTGGCGGCGATCCCGGCGTTGGCAGTGGGAAATGCGTG
GGTGGGCGGCTAACGCAAGGCGGAGGAGGAGCGCGGCAGGGCAGCCGGCAGAGACAAGGG
CTCTTTTTACATCTTTGTCTGCCAGAGAGTCTGTACATCCAAACGCATGCTCAACAAGGT
CGGCGCTTTCTCCAAAGACCCAGTAAACCCACCCACCTGCGTTACTTCATGTGGCGTCTC
CGATGTGGATGCATGTGCCGATGCCTGCGCACGTACCCTTTGTGCCACCCCCCACCACAT
TCCTTCCTGGAATGATATCTGCCTTCGCCGCTGTCAGTCTCAATGCCTCAAGGTACAACA
TGAAAACCCTTCTCTCTGAAGTCGAAGGAATTTCTCATCTCATGCTTAGTCAGAGATGAT
TGCAGTCAGTCTAGTCTGCTGGGGAAATAATTTTAGCATCACATTTTTTGGTTGGTGGAA
CGGCAAAATAGGCTTTGAGGCAATCAATGTGGGCAATGGGTTACCCAAAAAAAAAAAAAA
AAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q8L8Q8
Definition sp|Q8L8Q8|Y5486_ARATH Uncharacterized protein At5g64816 OS=Arabidopsis thaliana
Align length 87
Score (bit) 113.0
E-value 6.0e-25
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955463|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_C15, 5'
(526 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8L8Q8|Y5486_ARATH Uncharacterized protein At5g64816 OS=Arabi... 113 6e-25
sp|P36102|PAN3_YEAST PAB-dependent poly(A)-specific ribonuclease... 31 3.2
sp|Q8BHE4|TM108_MOUSE Transmembrane protein 108 OS=Mus musculus ... 30 9.2

>sp|Q8L8Q8|Y5486_ARATH Uncharacterized protein At5g64816
OS=Arabidopsis thaliana GN=At5g64816 PE=2 SV=1
Length = 130

Score = 113 bits (282), Expect = 6e-25
Identities = 52/87 (59%), Positives = 63/87 (72%)
Frame = +2

Query: 113 DKGSFYIFVCQRVCTSKRMLNKVGAFSKDPVNPPTCVTSCGVSDVXXXXXXXXRTLCATP 292
+K S IFVC+RVCTSKRML KVGAFSKDP+ P TCVT CGVS++ RT+C
Sbjct: 41 EKSSDEIFVCERVCTSKRMLKKVGAFSKDPI-PDTCVTVCGVSELDACSDACARTVCVNQ 99

Query: 293 HHIPSWNDICLRRCQSQCLKVQHENPS 373
H + +WNDICLRRCQS+CLK+ + S
Sbjct: 100 HQVANWNDICLRRCQSECLKLSSSSSS 126


>sp|P36102|PAN3_YEAST PAB-dependent poly(A)-specific ribonuclease
subunit PAN3 OS=Saccharomyces cerevisiae GN=PAN3 PE=1
SV=1
Length = 679

Score = 31.2 bits (69), Expect = 3.2
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1

Query: 274 YPLCHPPPHSFLE*YLPSPLSVSMPQGTT*KPFSLKSKEFLISCLVRDDCSQSSL 438
YP +PPPHS L+ +L +P S + KP + + I +R+D ++ +L
Sbjct: 218 YPRIYPPPHSLLQYHLYAPEQPSSLKSLL-KPNERSADQLFIPNNIREDLTKKNL 271


>sp|Q8BHE4|TM108_MOUSE Transmembrane protein 108 OS=Mus musculus
GN=Tmem108 PE=2 SV=1
Length = 574

Score = 29.6 bits (65), Expect = 9.2
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -2

Query: 285 AQRVRAQASAHASTSETPHEVTQV--GGFTGSLEKAPTLLSMR 163
+QR R Q+SAH ++ Q+ G FTGS E P+ L+ R
Sbjct: 196 SQRGRNQSSAHLGPKRPLGKIFQIYKGNFTGSAEPDPSALTPR 238


tr_hit_id B6TTM6
Definition tr|B6TTM6|B6TTM6_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 81
Score (bit) 115.0
E-value 1.0e-24
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955463|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_C15, 5'
(526 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6TTM6|B6TTM6_MAIZE Putative uncharacterized protein OS=Zea m... 115 1e-24
tr|B6TSZ9|B6TSZ9_MAIZE Putative uncharacterized protein OS=Zea m... 115 1e-24
tr|A9TJD9|A9TJD9_PHYPA Predicted protein OS=Physcomitrella paten... 115 1e-24
tr|Q570W1|Q570W1_ARATH Putative uncharacterized protein At5g6481... 113 7e-24
tr|Q10QS1|Q10QS1_ORYSJ Os03g0185600 protein OS=Oryza sativa subs... 113 7e-24
tr|B6SLN4|B6SLN4_MAIZE Putative uncharacterized protein OS=Zea m... 113 7e-24
tr|A2XDB2|A2XDB2_ORYSI Putative uncharacterized protein OS=Oryza... 113 7e-24
tr|A9NT64|A9NT64_PICSI Putative uncharacterized protein OS=Picea... 110 6e-23
tr|A7PTK6|A7PTK6_VITVI Chromosome undetermined scaffold_30, whol... 108 1e-22
tr|A5B0N5|A5B0N5_VITVI Putative uncharacterized protein (Chromos... 108 1e-22
tr|A9T6C4|A9T6C4_PHYPA Predicted protein OS=Physcomitrella paten... 100 8e-20
tr|A8I635|A8I635_CHLRE Predicted protein OS=Chlamydomonas reinha... 74 3e-12
tr|A4S8B4|A4S8B4_OSTLU Predicted protein OS=Ostreococcus lucimar... 70 5e-11
tr|Q00UA1|Q00UA1_OSTTA Chromosome 16 contig 1, DNA sequence (Fra... 33 8.8

>tr|B6TTM6|B6TTM6_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 125

Score = 115 bits (288), Expect = 1e-24
Identities = 50/81 (61%), Positives = 63/81 (77%)
Frame = +2

Query: 113 DKGSFYIFVCQRVCTSKRMLNKVGAFSKDPVNPPTCVTSCGVSDVXXXXXXXXRTLCATP 292
+K S +FVC+RVCTSKRMLNKVGAFSKDP+ P TCVT CGVS++ RT+C
Sbjct: 41 EKSSDEVFVCERVCTSKRMLNKVGAFSKDPI-PETCVTVCGVSELDACADACARTVCVNQ 99

Query: 293 HHIPSWNDICLRRCQSQCLKV 355
H +P+WND+CL+RCQS+CLK+
Sbjct: 100 HQVPNWNDVCLKRCQSECLKL 120


>tr|B6TSZ9|B6TSZ9_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 125

Score = 115 bits (288), Expect = 1e-24
Identities = 50/81 (61%), Positives = 63/81 (77%)
Frame = +2

Query: 113 DKGSFYIFVCQRVCTSKRMLNKVGAFSKDPVNPPTCVTSCGVSDVXXXXXXXXRTLCATP 292
+K S +FVC+RVCTSKRMLNKVGAFSKDP+ P TCVT CGVS++ RT+C
Sbjct: 41 EKSSDEVFVCERVCTSKRMLNKVGAFSKDPI-PETCVTVCGVSELDACADACARTVCVNQ 99

Query: 293 HHIPSWNDICLRRCQSQCLKV 355
H +P+WND+CL+RCQS+CLK+
Sbjct: 100 HQVPNWNDVCLKRCQSECLKL 120


>tr|A9TJD9|A9TJD9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_93525 PE=4 SV=1
Length = 167

Score = 115 bits (288), Expect = 1e-24
Identities = 52/80 (65%), Positives = 63/80 (78%)
Frame = +2

Query: 113 DKGSFYIFVCQRVCTSKRMLNKVGAFSKDPVNPPTCVTSCGVSDVXXXXXXXXRTLCATP 292
+KGS FVC+RVCTSKRML++VGAFSKDP P TCVT CGVS+V R++CA
Sbjct: 38 NKGSTDQFVCERVCTSKRMLSRVGAFSKDPT-PDTCVTVCGVSEVDACSEACVRSVCANA 96

Query: 293 HHIPSWNDICLRRCQSQCLK 352
HH+P+WNDICLRRCQ+QC+K
Sbjct: 97 HHVPNWNDICLRRCQTQCIK 116


>tr|Q570W1|Q570W1_ARATH Putative uncharacterized protein At5g64816
(At5g64816) OS=Arabidopsis thaliana GN=At5g64816 PE=2
SV=1
Length = 130

Score = 113 bits (282), Expect = 7e-24
Identities = 52/87 (59%), Positives = 63/87 (72%)
Frame = +2

Query: 113 DKGSFYIFVCQRVCTSKRMLNKVGAFSKDPVNPPTCVTSCGVSDVXXXXXXXXRTLCATP 292
+K S IFVC+RVCTSKRML KVGAFSKDP+ P TCVT CGVS++ RT+C
Sbjct: 41 EKSSDEIFVCERVCTSKRMLKKVGAFSKDPI-PDTCVTVCGVSELDACSDACARTVCVNQ 99

Query: 293 HHIPSWNDICLRRCQSQCLKVQHENPS 373
H + +WNDICLRRCQS+CLK+ + S
Sbjct: 100 HQVANWNDICLRRCQSECLKLSSSSSS 126


>tr|Q10QS1|Q10QS1_ORYSJ Os03g0185600 protein OS=Oryza sativa subsp.
japonica GN=Os03g0185600 PE=4 SV=1
Length = 125

Score = 113 bits (282), Expect = 7e-24
Identities = 49/81 (60%), Positives = 62/81 (76%)
Frame = +2

Query: 113 DKGSFYIFVCQRVCTSKRMLNKVGAFSKDPVNPPTCVTSCGVSDVXXXXXXXXRTLCATP 292
+K S +FVC+RVCTSKRML KVGAFSKDP+ P TCVT CGVS++ RT+C
Sbjct: 41 EKSSDEVFVCERVCTSKRMLKKVGAFSKDPI-PETCVTVCGVSELDACADACARTVCVNQ 99

Query: 293 HHIPSWNDICLRRCQSQCLKV 355
H +P+WND+CL+RCQS+CLK+
Sbjct: 100 HQVPNWNDVCLKRCQSECLKL 120


>tr|B6SLN4|B6SLN4_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 125

Score = 113 bits (282), Expect = 7e-24
Identities = 49/81 (60%), Positives = 62/81 (76%)
Frame = +2

Query: 113 DKGSFYIFVCQRVCTSKRMLNKVGAFSKDPVNPPTCVTSCGVSDVXXXXXXXXRTLCATP 292
+K S +FVC+RVCTSKRML KVGAFSKDP+ P TCVT CGVS++ RT+C
Sbjct: 41 EKSSDEVFVCERVCTSKRMLKKVGAFSKDPI-PETCVTVCGVSELDACADACARTVCVNQ 99

Query: 293 HHIPSWNDICLRRCQSQCLKV 355
H +P+WND+CL+RCQS+CLK+
Sbjct: 100 HQVPNWNDVCLKRCQSECLKL 120


>tr|A2XDB2|A2XDB2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_10295 PE=4 SV=1
Length = 125

Score = 113 bits (282), Expect = 7e-24
Identities = 49/81 (60%), Positives = 62/81 (76%)
Frame = +2

Query: 113 DKGSFYIFVCQRVCTSKRMLNKVGAFSKDPVNPPTCVTSCGVSDVXXXXXXXXRTLCATP 292
+K S +FVC+RVCTSKRML KVGAFSKDP+ P TCVT CGVS++ RT+C
Sbjct: 41 EKSSDEVFVCERVCTSKRMLKKVGAFSKDPI-PETCVTVCGVSELDACADACARTVCVNQ 99

Query: 293 HHIPSWNDICLRRCQSQCLKV 355
H +P+WND+CL+RCQS+CLK+
Sbjct: 100 HQVPNWNDVCLKRCQSECLKL 120


>tr|A9NT64|A9NT64_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 124

Score = 110 bits (274), Expect = 6e-23
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = +2

Query: 131 IFVCQRVCTSKRMLNKVGAFSKDPVNPPTCVTSCGVSDVXXXXXXXXRTLCATPHHIPSW 310
IFVC+RVCTSKRMLNKVG FSKD P TCVT CGVS++ RT+C HH+P+W
Sbjct: 45 IFVCERVCTSKRMLNKVGDFSKDST-PNTCVTVCGVSELDACTDACARTVCVNQHHLPNW 103

Query: 311 NDICLRRCQSQCLKVQ 358
NDICLRRCQ+QCL+++
Sbjct: 104 NDICLRRCQNQCLRLR 119


>tr|A7PTK6|A7PTK6_VITVI Chromosome undetermined scaffold_30, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00023393001 PE=4 SV=1
Length = 126

Score = 108 bits (271), Expect = 1e-22
Identities = 51/87 (58%), Positives = 61/87 (70%)
Frame = +2

Query: 113 DKGSFYIFVCQRVCTSKRMLNKVGAFSKDPVNPPTCVTSCGVSDVXXXXXXXXRTLCATP 292
+K S IFVC+RVCTSKRML KVG FSKDP + TCVT CGVS++ RT+C
Sbjct: 41 EKTSDEIFVCERVCTSKRMLKKVGTFSKDPSHD-TCVTVCGVSELDACSDACARTVCVNQ 99

Query: 293 HHIPSWNDICLRRCQSQCLKVQHENPS 373
H +P+WNDICLRRCQS+CLK+ S
Sbjct: 100 HQVPNWNDICLRRCQSECLKLSASRSS 126


>tr|A5B0N5|A5B0N5_VITVI Putative uncharacterized protein (Chromosome
chr18 scaffold_1, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00015110001 PE=4 SV=1
Length = 129

Score = 108 bits (271), Expect = 1e-22
Identities = 48/78 (61%), Positives = 57/78 (73%)
Frame = +2

Query: 134 FVCQRVCTSKRMLNKVGAFSKDPVNPPTCVTSCGVSDVXXXXXXXXRTLCATPHHIPSWN 313
FVC+RVCTSKRML KV A SKDP P TCVT CGVS++ RT+C H +P+WN
Sbjct: 48 FVCERVCTSKRMLKKVSALSKDPT-PDTCVTVCGVSEIDACTDACARTVCVNQHQVPNWN 106

Query: 314 DICLRRCQSQCLKVQHEN 367
DICLRRCQS+CLK+ + N
Sbjct: 107 DICLRRCQSECLKLSNSN 124