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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955468
Clone id TST39A01NGRL0023_C20
Library
Length 576
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_C20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TGCAGGTCTGCGGCTCGTCTTCTTCGCAATTGTGACTCCGGCAAGCTCTGCGTTCCCTCT
CTAGAAGGTTTGCAGCATCAAGCTTGGATGTGGTGCTGCTAATGCTAAGCATAGTTTATT
TGAGGCAAATGGTGTAGCCTACTGGTGCTTCTACGATCTCTTGAGTCATGAAATAGTTCT
TACGTAAGGTAGAAACAGGTTTTCTTCATATTTCTCGCATCAATGGCGGAACCCAAAGAT
GACGAAAGAGATGAGGAATGGTTTAAGGAGGTTTATGGAAAAGAGTACACAGGACCCGTT
AGGCCTGGCAGTGACAATGCTCGGGATAATTTGAGCACCAAGAAAAGGTCAATGACAGAA
GCAATTAGCAATGAACCTGATGAGGACGAGGCCCCTCCGGATCCTAATGCTGTGCCCACT
GATTTCACAAGTAGGGAAGCTAAAGTGTGGGAGGCGAAAGCCAAAGCCATAGAAAGGAAT
TGGAAGAAAAAAAAGGAGGAGGAGCTCATTTGCCGTATTTGTGGCGAGTATGGCCATTTC
TCTCAGGGTTGTCCTTCAACTTTGGGAGTCAATCGC
■■Homology search results ■■ -
sp_hit_id Q6BSP4
Definition sp|Q6BSP4|BBP_DEBHA Branchpoint-bridging protein OS=Debaryomyces hansenii
Align length 42
Score (bit) 33.1
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955468|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_C20, 5'
         (576 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6BSP4|BBP_DEBHA Branchpoint-bridging protein OS=Debaryomyces...    33   1.0  
sp|Q4P384|YTH1_USTMA mRNA 3'-end-processing protein YTH1 OS=Usti...    33   1.3  
sp|Q12186|BBP_YEAST Branchpoint-bridging protein OS=Saccharomyce...    32   1.8  
sp|Q5BLK4|ZCHC6_MOUSE Zinc finger CCHC domain-containing protein...    32   2.3  
sp|Q5VYS8|ZCHC6_HUMAN Zinc finger CCHC domain-containing protein...    32   2.3  
sp|Q91DM0|POLG_PVCV1 Genome polyprotein OS=Petunia vein clearing...    31   3.9  
sp|Q8NIW7|BBP_NEUCR Branchpoint-bridging protein OS=Neurospora c...    31   3.9  
sp|Q499Q5|MKS1_RAT Meckel syndrome type 1 protein homolog OS=Rat...    31   5.1  
sp|Q5SW45|MKS1_MOUSE Meckel syndrome type 1 protein homolog OS=M...    31   5.1  
sp|Q759T4|EIF3G_ASHGO Eukaryotic translation initiation factor 3...    31   5.1  
sp|Q9FQ04|XRN4_ARATH 5'-3' exoribonuclease 4 OS=Arabidopsis thal...    30   6.7  
sp|Q5AED9|BBP_CANAL Branchpoint-bridging protein OS=Candida albi...    30   6.7  
sp|Q4WXV6|BBP_ASPFU Branchpoint-bridging protein OS=Aspergillus ...    30   6.7  
sp|Q63HN8|RN213_HUMAN RING finger protein 213 OS=Homo sapiens GN...    30   8.6  
sp|Q6XKE6|POLG_PVCV2 Genome polyprotein OS=Petunia vein clearing...    30   8.7  

>sp|Q6BSP4|BBP_DEBHA Branchpoint-bridging protein OS=Debaryomyces
           hansenii GN=BBP PE=3 SV=2
          Length = 518

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 427 TSREAKVWEAKAKAIERNWKKKKEEELICRICGEYGHFSQGC 552
           T RE K +  + +   R+       +L+C+ CG+ GHF++ C
Sbjct: 293 TLRETKPYNPETQQSRRSRPGLDVSQLVCKSCGKVGHFARDC 334


>sp|Q4P384|YTH1_USTMA mRNA 3'-end-processing protein YTH1
           OS=Ustilago maydis GN=YTH1 PE=3 SV=1
          Length = 366

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 475 RNWKKKKEEELICRICGEYGHFSQGCPS 558
           R W+K   E ++C  CGE GHF+  CP+
Sbjct: 312 RGWRKDLSE-VLCFKCGEMGHFANMCPN 338


>sp|Q12186|BBP_YEAST Branchpoint-bridging protein OS=Saccharomyces
           cerevisiae GN=MSL5 PE=1 SV=1
          Length = 476

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +1

Query: 478 NWKKKKEEELICRICGEYGHFSQGCPST 561
           N K    + ++C+ICG+ GHFS+ C S+
Sbjct: 288 NRKIPNIQGIVCKICGQTGHFSRDCNSS 315


>sp|Q5BLK4|ZCHC6_MOUSE Zinc finger CCHC domain-containing protein 6
            OS=Mus musculus GN=Zcchc6 PE=2 SV=2
          Length = 1491

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 511  CRICGEYGHFSQGCPSTLGVNR 576
            CRICG+ GHF + CP    V R
Sbjct: 1343 CRICGKIGHFMKDCPMRRKVRR 1364


>sp|Q5VYS8|ZCHC6_HUMAN Zinc finger CCHC domain-containing protein 6
            OS=Homo sapiens GN=ZCCHC6 PE=1 SV=1
          Length = 1495

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 511  CRICGEYGHFSQGCPSTLGVNR 576
            CRICG+ GHF + CP    V R
Sbjct: 1347 CRICGKIGHFMKDCPMRRKVRR 1368


>sp|Q91DM0|POLG_PVCV1 Genome polyprotein OS=Petunia vein clearing
            virus (isolate Shepherd) PE=3 SV=1
          Length = 2179

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +1

Query: 424  FTSREAKVWEAKAKAIERNWKKK--KEEELICRICGEYGHFSQGCP 555
            F  R+ + +  + +   R+   K  +++   C  CG+ GHFS+ CP
Sbjct: 1081 FKERDGRQYRKRRRFFRRSKTSKAMRQKPRSCFTCGKIGHFSRNCP 1126


>sp|Q8NIW7|BBP_NEUCR Branchpoint-bridging protein OS=Neurospora
           crassa GN=bpb-1 PE=3 SV=1
          Length = 607

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 484 KKKKEEELICRICGEYGHFSQGCP 555
           K+     +ICR+CG  GH ++ CP
Sbjct: 337 KQNYTANIICRVCGNAGHMARDCP 360


>sp|Q499Q5|MKS1_RAT Meckel syndrome type 1 protein homolog OS=Rattus
           norvegicus GN=Mks1 PE=2 SV=2
          Length = 561

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 12/27 (44%), Positives = 23/27 (85%), Gaps = 2/27 (7%)
 Frame = +1

Query: 214 LASMAEPKDDERDEEWFKEVYG--KEY 288
           ++S+A+P+++ER++  FK++YG  KEY
Sbjct: 271 VSSLAQPEEEEREQRVFKDLYGRHKEY 297


>sp|Q5SW45|MKS1_MOUSE Meckel syndrome type 1 protein homolog OS=Mus
           musculus GN=Mks1 PE=2 SV=1
          Length = 561

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 12/27 (44%), Positives = 23/27 (85%), Gaps = 2/27 (7%)
 Frame = +1

Query: 214 LASMAEPKDDERDEEWFKEVYG--KEY 288
           ++S+A+P+++ER++  FK++YG  KEY
Sbjct: 271 VSSLAQPEEEEREQRVFKDLYGRHKEY 297


>sp|Q759T4|EIF3G_ASHGO Eukaryotic translation initiation factor 3
           subunit G OS=Ashbya gossypii GN=TIF35 PE=3 SV=1
          Length = 269

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 442 KVWEAKAKAIERNWKKKKEEELICRICGEYGHFSQGCP 555
           +V E  +K  E+  ++ ++   +CR CG  GHF+  CP
Sbjct: 89  EVREQDSKEKEKEKQEGEKSLYVCRTCGIPGHFTTKCP 126
tr_hit_id A9TLA8
Definition tr|A9TLA8|A9TLA8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 120
Score (bit) 139.0
E-value 1.0e-31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955468|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_C20, 5'
         (576 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TLA8|A9TLA8_PHYPA Predicted protein (Fragment) OS=Physcomit...   139   1e-31
tr|Q5NBC3|Q5NBC3_ORYSJ cDNA clone:001-114-C08, full insert seque...   134   3e-30
tr|A7Q0Q5|A7Q0Q5_VITVI Chromosome chr7 scaffold_42, whole genome...   132   2e-29
tr|B4FCC2|B4FCC2_MAIZE Putative uncharacterized protein OS=Zea m...   130   7e-29
tr|B6TIM5|B6TIM5_MAIZE Putative uncharacterized protein OS=Zea m...   128   2e-28
tr|Q9LZQ7|Q9LZQ7_ARATH Putative uncharacterized protein T12C14_3...   118   3e-25
tr|A2ZRC4|A2ZRC4_ORYSJ Putative uncharacterized protein OS=Oryza...   114   3e-24
tr|B7FKP4|B7FKP4_MEDTR Putative uncharacterized protein OS=Medic...   112   2e-23
tr|A2WMY2|A2WMY2_ORYSI Putative uncharacterized protein OS=Oryza...   105   2e-21
tr|Q8LSK0|Q8LSK0_MAIZE Gag and Pol OS=Zea mays GN=gag/pol PE=4 SV=1    37   0.79 
tr|Q9STJ1|Q9STJ1_ARATH Putative uncharacterized protein AT4g1220...    37   1.0  
tr|B0EAQ2|B0EAQ2_ENTDI Cellular nucleic acid binding protein, pu...    37   1.0  
tr|Q7XTX2|Q7XTX2_ORYSJ OSJNBa0019K04.26 protein OS=Oryza sativa ...    36   1.8  
tr|B3RPS1|B3RPS1_TRIAD Putative uncharacterized protein OS=Trich...    35   3.9  
tr|Q5TJ69|Q5TJ69_9VIRU CP, RT, RNaseH and protease polyprotein O...    34   5.1  
tr|Q84MR5|Q84MR5_ORYSJ Putative copia-type pol polyprotein OS=Or...    34   5.1  
tr|Q10JT1|Q10JT1_ORYSJ Retrotransposon protein, putative, unclas...    34   5.1  
tr|B6KS01|B6KS01_TOXGO Zinc finger (CCCH type) protein, putative...    34   5.1  
tr|Q9UVD9|Q9UVD9_ALTAL Gag OS=Alternaria alternata GN=gag PE=4 SV=1    34   5.1  
tr|A7TFW4|A7TFW4_VANPO Putative uncharacterized protein OS=Vande...    34   6.7  
tr|Q7XRW0|Q7XRW0_ORYSJ OSJNBb0058J09.8 protein OS=Oryza sativa s...    33   8.7  
tr|B6REL1|B6REL1_9BRAS Polyprotein OS=Boechera divaricarpa GN=Ty...    33   8.7  
tr|A9RU85|A9RU85_PHYPA Predicted protein (Fragment) OS=Physcomit...    33   8.7  
tr|Q6FN84|Q6FN84_CANGA Similarities with uniprot|P40083 Saccharo...    33   8.7  

>tr|A9TLA8|A9TLA8_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_223358 PE=4 SV=1
          Length = 197

 Score =  139 bits (349), Expect = 1e-31
 Identities = 69/120 (57%), Positives = 78/120 (65%), Gaps = 2/120 (1%)
 Frame = +1

Query: 223 MAEPKDDERDEEWFKEVYGKEYTGPVRPGSDNAR--DNLSTKKRSMTEAISXXXXXXXXX 396
           MAE  DD+RDEEWFKEVYG EYT P R      R  +    K  +               
Sbjct: 1   MAEELDDDRDEEWFKEVYGTEYTAPARATGATRRAVEPAPPKVANKRAPNPSDSEEDEEQ 60

Query: 397 XXXXXVPTDFTSREAKVWEAKAKAIERNWKKKKEEELICRICGEYGHFSQGCPSTLGVNR 576
                VPTDFTSREAKVWEAKAKA+ERNWK++KEEEL CR+CGE GHF+QGCP+TLG NR
Sbjct: 61  RDPTAVPTDFTSREAKVWEAKAKAVERNWKRRKEEELTCRLCGEVGHFAQGCPTTLGGNR 120


>tr|Q5NBC3|Q5NBC3_ORYSJ cDNA clone:001-114-C08, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0434D08.42 PE=2 SV=1
          Length = 275

 Score =  134 bits (338), Expect = 3e-30
 Identities = 67/118 (56%), Positives = 79/118 (66%)
 Frame = +1

Query: 223 MAEPKDDERDEEWFKEVYGKEYTGPVRPGSDNARDNLSTKKRSMTEAISXXXXXXXXXXX 402
           MA     E D+E F EVYGK Y+GPV   ++N    ++ +KR +    S           
Sbjct: 1   MAREPSPEIDDELFNEVYGKAYSGPVATTTNNVTPRVNDEKRPLEREKSDEEDGPPDPNA 60

Query: 403 XXXVPTDFTSREAKVWEAKAKAIERNWKKKKEEELICRICGEYGHFSQGCPSTLGVNR 576
              VPTDFTSREAKVWEAKAKA ERNWKK+KEEE+IC+ICGE GHF+QGCPSTLG NR
Sbjct: 61  ---VPTDFTSREAKVWEAKAKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGANR 115


>tr|A7Q0Q5|A7Q0Q5_VITVI Chromosome chr7 scaffold_42, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028140001
           PE=4 SV=1
          Length = 464

 Score =  132 bits (331), Expect = 2e-29
 Identities = 68/121 (56%), Positives = 79/121 (65%)
 Frame = +1

Query: 214 LASMAEPKDDERDEEWFKEVYGKEYTGPVRPGSDNARDNLSTKKRSMTEAISXXXXXXXX 393
           +A   EP DD+     F E+Y KEYTGP R  + N +D   T KRS   +          
Sbjct: 1   MAKRPEPDDDD-----FSEIY-KEYTGPPRSTTSNVQDKAKTSKRSHASS-----DEEEE 49

Query: 394 XXXXXXVPTDFTSREAKVWEAKAKAIERNWKKKKEEELICRICGEYGHFSQGCPSTLGVN 573
                 VPTDFTSREAKVWEAK+KA ERNWKK+KEEE+IC+ICGE GHF+QGCPSTLG N
Sbjct: 50  PRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGAN 109

Query: 574 R 576
           R
Sbjct: 110 R 110


>tr|B4FCC2|B4FCC2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 467

 Score =  130 bits (326), Expect = 7e-29
 Identities = 64/118 (54%), Positives = 79/118 (66%)
 Frame = +1

Query: 223 MAEPKDDERDEEWFKEVYGKEYTGPVRPGSDNARDNLSTKKRSMTEAISXXXXXXXXXXX 402
           MA     E D+E + EVYGK Y+GPV   +++     + +KR +T   S           
Sbjct: 1   MAREPSPEIDDELYNEVYGKAYSGPVASATNSVTPKGNAEKRPLTRDKSDDEDEAPDPNA 60

Query: 403 XXXVPTDFTSREAKVWEAKAKAIERNWKKKKEEELICRICGEYGHFSQGCPSTLGVNR 576
              VPTDFTSREAKVWEAKAKA ERNWKK+KEEE+IC+ICG+ GHF+QGCPSTLG N+
Sbjct: 61  ---VPTDFTSREAKVWEAKAKATERNWKKRKEEEMICKICGDPGHFTQGCPSTLGANK 115


>tr|B6TIM5|B6TIM5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 467

 Score =  128 bits (322), Expect = 2e-28
 Identities = 63/118 (53%), Positives = 79/118 (66%)
 Frame = +1

Query: 223 MAEPKDDERDEEWFKEVYGKEYTGPVRPGSDNARDNLSTKKRSMTEAISXXXXXXXXXXX 402
           MA     E D+E + EVYGK Y+GPV   +++     + +KR +T   S           
Sbjct: 1   MAREPSPEIDDELYNEVYGKAYSGPVASATNSVTPKGNAEKRPLTRDKSDDEDEAPDPNA 60

Query: 403 XXXVPTDFTSREAKVWEAKAKAIERNWKKKKEEELICRICGEYGHFSQGCPSTLGVNR 576
              VPTDFTSREAKVWEAKAKA +RNWKK+KEEE+IC+ICG+ GHF+QGCPSTLG N+
Sbjct: 61  ---VPTDFTSREAKVWEAKAKATKRNWKKRKEEEMICKICGDPGHFTQGCPSTLGANK 115


>tr|Q9LZQ7|Q9LZQ7_ARATH Putative uncharacterized protein T12C14_30
           (At3g62330) OS=Arabidopsis thaliana GN=T12C14_30 PE=2
           SV=1
          Length = 479

 Score =  118 bits (295), Expect = 3e-25
 Identities = 62/114 (54%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
 Frame = +1

Query: 238 DDERDEEWFKEVYGKEYTGPVRPGSDNARDNLSTKKRSMTE-AISXXXXXXXXXXXXXXV 414
           D E D++ F E+Y KEYTGP    ++N   N+  K + + + +                V
Sbjct: 7   DPELDDD-FSEIY-KEYTGPASAVTNN---NIQDKDKPVKQRSEERCDEEEEQLPDPNSV 61

Query: 415 PTDFTSREAKVWEAKAKAIERNWKKKKEEELICRICGEYGHFSQGCPSTLGVNR 576
           PTDFTSREAKVWEAK+KA ERNWKK+KEEE+IC+ICGE GHF+QGCPSTLG NR
Sbjct: 62  PTDFTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGANR 115


>tr|A2ZRC4|A2ZRC4_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_001096 PE=4 SV=1
          Length = 385

 Score =  114 bits (286), Expect = 3e-24
 Identities = 58/108 (53%), Positives = 70/108 (64%)
 Frame = +1

Query: 223 MAEPKDDERDEEWFKEVYGKEYTGPVRPGSDNARDNLSTKKRSMTEAISXXXXXXXXXXX 402
           MA     E D+E F EVYGK Y+GPV   ++N    ++ +KR +    S           
Sbjct: 1   MAREPSPEIDDELFNEVYGKAYSGPVATTTNNVTPRVNDEKRPLEREKSDEEDGPPDPNA 60

Query: 403 XXXVPTDFTSREAKVWEAKAKAIERNWKKKKEEELICRICGEYGHFSQ 546
              VPTDFTSREAKVWEAKAKA ERNWKK+KEEE+IC+ICGE GHF+Q
Sbjct: 61  ---VPTDFTSREAKVWEAKAKATERNWKKRKEEEMICKICGESGHFTQ 105


>tr|B7FKP4|B7FKP4_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 361

 Score =  112 bits (279), Expect = 2e-23
 Identities = 58/117 (49%), Positives = 77/117 (65%)
 Frame = +1

Query: 223 MAEPKDDERDEEWFKEVYGKEYTGPVRPGSDNARDNLSTKKRSMTEAISXXXXXXXXXXX 402
           MA   D + D++ F+++Y KEYTGP   GS + ++   + KRS     +           
Sbjct: 1   MANIPDPDIDDD-FRDLY-KEYTGPA--GSGSVQERAKSNKRS-----NAGSDEEDEVRD 51

Query: 403 XXXVPTDFTSREAKVWEAKAKAIERNWKKKKEEELICRICGEYGHFSQGCPSTLGVN 573
              +PT F SR+AKVWEAK+KA ERNWKK+KEEE+IC++CGE GHF+QGCPSTLG N
Sbjct: 52  PNAIPTGFISRDAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGAN 108


>tr|A2WMY2|A2WMY2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_01205 PE=4 SV=1
          Length = 106

 Score =  105 bits (262), Expect = 2e-21
 Identities = 54/102 (52%), Positives = 65/102 (63%)
 Frame = +1

Query: 223 MAEPKDDERDEEWFKEVYGKEYTGPVRPGSDNARDNLSTKKRSMTEAISXXXXXXXXXXX 402
           MA     E D+E F EVYGK Y+GPV   ++N    ++ +KR +    S           
Sbjct: 1   MAREPSPEIDDELFNEVYGKAYSGPVATTTNNVMPRVNDEKRPLEREKSDEEDGPPDPNA 60

Query: 403 XXXVPTDFTSREAKVWEAKAKAIERNWKKKKEEELICRICGE 528
              VPTDFTSREAKVWEAKAKA ERNWKK+KEEE+IC+ICGE
Sbjct: 61  ---VPTDFTSREAKVWEAKAKATERNWKKRKEEEMICKICGE 99


>tr|Q8LSK0|Q8LSK0_MAIZE Gag and Pol OS=Zea mays GN=gag/pol PE=4 SV=1
          Length = 1264

 Score = 37.0 bits (84), Expect = 0.79
 Identities = 16/27 (59%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = +1

Query: 478 NWKKKKEE-ELICRICGEYGHFSQGCP 555
           N+KKKK + EL C  CGE GHF++ CP
Sbjct: 196 NFKKKKNKAELTCFACGEAGHFAKDCP 222