DK955472
Clone id TST39A01NGRL0023_C24
Library
Length 545
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_C24. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
TTTTTCCAGGCTGTCGTCTCAGATCGTCTCTCTTTCCTGTACAGAAAAAACTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACTCACACACACACACACACACACA
CAGCAGGCGCGCTCACAGTGTCACACAAACCGGAGGTCAGGGAGGGTGCTGCAACAGATG
CTTGCATTAATTGTCTGGCAGCTGCTTTTGCAAATAGGATTTTTTGAAGACTCAAGCTCT
TCTTTAAGGTCAATTTCATTCATCGGGGCTTTCTGTACCTATGCAAGGCATGGGCTAGAC
CTCGCACACGTCTTTGGCCTCCCCAAGTGATGTTGGAGACAGAATTTGAAATGTTTAGCC
TGTAGGGCGGGTGATCATTGTTTCAAACTACGAAGATGGGCGACCCATCACTAAGAAGTG
CGTGGGGTTGGGAAATGCCGAGTTATGATCTTCGCAGGTCTGTGGACACAAGCCGGATGC
GTCCATCTAGTGACGATGACGATAATGAGGACGATGATGAGGATGCCGCTGCTCTTTTGG
ATAGG
■■Homology search results ■■ -
sp_hit_id Q04592
Definition sp|Q04592|PCSK5_MOUSE Proprotein convertase subtilisin/kexin type 5 OS=Mus musculus
Align length 30
Score (bit) 29.6
E-value 9.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955472|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_C24, 5'
(532 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q04592|PCSK5_MOUSE Proprotein convertase subtilisin/kexin typ... 30 9.4

>sp|Q04592|PCSK5_MOUSE Proprotein convertase subtilisin/kexin type 5
OS=Mus musculus GN=Pcsk5 PE=1 SV=2
Length = 1877

Score = 29.6 bits (65), Expect = 9.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3

Query: 257 EIDLKEELESSKNPICKSSCQTINASICCS 168
++ +K + S P C SSC+T N S+C S
Sbjct: 1198 KVQIKRDATSQNQP-CHSSCKTCNGSLCAS 1226


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955472|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_C24, 5'
(532 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******