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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955484
Clone id TST39A01NGRL0023_D13
Library
Length 631
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_D13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
ATTAGCATCCCAAGTCGCAACAGCACATATTGCACTCTTCCCCGCAAGCGTTTCTCTCTG
CAAGGAGTGTCGCAATGGCAGCTGCCACAGTGCTCTCTTCCTCATTTGTGGGGCAAGCCT
CTCTTCTGCGGGAGAGCAATGAGCTGTCCAGCAGGGTAACGGCAGGCGAGGCCCGCGTGC
AGATGAGGTCCTCGAAGAAGTCGGCACCCTCGGGTAGCATCTGGTATGGCGCCGACCGCC
CTCTCTACTTGGGCCCTTTTTCAGGCTCTCCCCCATCCTACCTGACGGGTGAGTTCCCCG
GTGACTACGGCTGGGACACCGCCGGACTGTCCGCCGACCCTGAAACGTTCGCCAAGAACC
GAGAACTAGAGGTTATCCACGCCAGATGGGCCATGCTGGGCGCCCTGGGCTGCGTCACCC
CTGAGCTGCTGGCCAAGAACGGCGTCAAGTTCGGCGAGGCTGTCTGGTTCAAGGCCGGCT
CTCAGATCTTCGCCGACGGCGGCCTGGACTACCTAGGCAACCCCAGCCTGGTGCACGCGC
AGAGCATCCTCGCCATCTGGGCCTGCCAGGTCATTCTCATGGGCGCTGTGGAGGGCTACC
GAGTCGCCGGCGGCCCGTTGGGCGAGGTGTC
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 186
Score (bit) 312.0
E-value 8.0e-85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955484|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_D13, 5'
         (631 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   312   8e-85
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   286   8e-77
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   285   2e-76
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   285   2e-76
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   284   2e-76
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   283   7e-76
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...   283   7e-76
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   282   1e-75
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   282   1e-75
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   281   1e-75
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...   281   1e-75
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   281   2e-75
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   281   3e-75
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   280   3e-75
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   280   3e-75
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   280   4e-75
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   280   4e-75
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   279   7e-75
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   279   7e-75
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   278   1e-74
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   278   2e-74
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   278   2e-74
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   276   5e-74
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   276   8e-74
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl...   275   1e-73
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   275   2e-73
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   275   2e-73
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...   274   2e-73
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   274   3e-73
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   274   3e-73

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  312 bits (800), Expect = 8e-85
 Identities = 156/186 (83%), Positives = 164/186 (88%), Gaps = 1/186 (0%)
 Frame = +3

Query: 75  MAAATV-LSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYL 251
           MA +T  L+S+F GQ             V AGEARVQM + K  APSGSIWYG+DRPLYL
Sbjct: 1   MATSTAALTSTFSGQQLKPVNELSRK--VGAGEARVQMMAPKSKAPSGSIWYGSDRPLYL 58

Query: 252 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 431
           GPFSGSPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELL
Sbjct: 59  GPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 118

Query: 432 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 611
           AKNGVKFGEAVWFKAGSQIFA+GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG
Sbjct: 119 AKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 178

Query: 612 GPLGEV 629
           GPLGEV
Sbjct: 179 GPLGEV 184


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  286 bits (731), Expect = 8e-77
 Identities = 145/188 (77%), Positives = 154/188 (81%), Gaps = 3/188 (1%)
 Frame = +3

Query: 75  MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPL 245
           MAAAT+   S SF GQA              +G  R+ MR +  KSAPS S WYG DR  
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEI----SGNGRITMRKAVAKSAPSSSPWYGPDRVK 56

Query: 246 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPE 425
           YLGPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE
Sbjct: 57  YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 116

Query: 426 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 605
           LLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+
Sbjct: 117 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 176

Query: 606 AGGPLGEV 629
           AGGPLGEV
Sbjct: 177 AGGPLGEV 184


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
           chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
          Length = 265

 Score =  285 bits (728), Expect = 2e-76
 Identities = 136/159 (85%), Positives = 145/159 (91%), Gaps = 4/159 (2%)
 Frame = +3

Query: 165 GEARVQMRSS----KKSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 332
           GEARV MR +    K +A SGS WYG DR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26  GEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 333 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 512
           ADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 513 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 629
           LGNPSL+HAQSILAIWACQV+LMGA+EGYRVAGGPLGEV
Sbjct: 146 LGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEV 184


>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic
           OS=Zea mays PE=2 SV=1
          Length = 265

 Score =  285 bits (728), Expect = 2e-76
 Identities = 144/191 (75%), Positives = 157/191 (82%), Gaps = 6/191 (3%)
 Frame = +3

Query: 75  MAAATVLSSS--FVGQAXXXXXXXXXXXXVTAGEARVQMRSS----KKSAPSGSIWYGAD 236
           MA++T+  SS  F G+A             + GEARV MR +    K +A SGS WYG D
Sbjct: 1   MASSTMALSSTAFAGKAVNVPSS-------SFGEARVTMRKTAAKAKPAAASGSPWYGPD 53

Query: 237 RPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCV 416
           R LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV
Sbjct: 54  RVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 113

Query: 417 TPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG 596
            PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEG
Sbjct: 114 FPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG 173

Query: 597 YRVAGGPLGEV 629
           YR+AGGPLGEV
Sbjct: 174 YRIAGGPLGEV 184


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  284 bits (727), Expect = 2e-76
 Identities = 138/184 (75%), Positives = 149/184 (80%)
 Frame = +3

Query: 75  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLG 254
           MA   +  S+FVGQA               GE R+ MR + KSAP  SIWYG DRP YLG
Sbjct: 1   MATCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQ-SIWYGEDRPKYLG 59

Query: 255 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 434
           PFS   PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+
Sbjct: 60  PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILS 119

Query: 435 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 614
           KNGVKFGEAVWFKAGSQIF++GGLDYLGNP+LVHAQSILAIWACQV+LMG VEGYRV GG
Sbjct: 120 KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGG 179

Query: 615 PLGE 626
           PLGE
Sbjct: 180 PLGE 183


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  283 bits (723), Expect = 7e-76
 Identities = 141/187 (75%), Positives = 157/187 (83%), Gaps = 2/187 (1%)
 Frame = +3

Query: 75  MAAATVL-SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPLY 248
           MAAAT + S++  GQ+            +   EARV MR +  KSA S +IWYGADRP +
Sbjct: 1   MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKF 60

Query: 249 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPEL 428
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 429 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 608
           LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVA
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 180

Query: 609 GGPLGEV 629
           GGPLGEV
Sbjct: 181 GGPLGEV 187



 Score = 31.2 bits (69), Expect = 4.6
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +3

Query: 261 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKN 440
           +G P   +T        +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   
Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239

Query: 441 G 443
           G
Sbjct: 240 G 240


>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1,
           chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R
           PE=2 SV=2
          Length = 265

 Score =  283 bits (723), Expect = 7e-76
 Identities = 144/190 (75%), Positives = 157/190 (82%), Gaps = 5/190 (2%)
 Frame = +3

Query: 75  MAAATV-LSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS----KKSAPSGSIWYGADR 239
           MAAAT+ LSS  + +A               GEAR+ MR +    K +A SGS WYGADR
Sbjct: 1   MAAATMALSSPVMARAAPSTSSALF------GEARITMRKTAAKPKPAASSGSPWYGADR 54

Query: 240 PLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVT 419
            LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV 
Sbjct: 55  VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 114

Query: 420 PELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGY 599
           PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGY
Sbjct: 115 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGY 174

Query: 600 RVAGGPLGEV 629
           R+AGGPLGEV
Sbjct: 175 RIAGGPLGEV 184


>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16,
           chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1
          Length = 266

 Score =  282 bits (721), Expect = 1e-75
 Identities = 142/187 (75%), Positives = 149/187 (79%), Gaps = 3/187 (1%)
 Frame = +3

Query: 78  AAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMR---SSKKSAPSGSIWYGADRPLY 248
           A+ T LSS F G+A               G  +V MR   S  K   SGS WYG DR  Y
Sbjct: 3   ASTTALSSPFAGKAVKLSPSSSE----VTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKY 58

Query: 249 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPEL 428
           LGPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL
Sbjct: 59  LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 118

Query: 429 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 608
           LA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVA
Sbjct: 119 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 178

Query: 609 GGPLGEV 629
           GGPLGEV
Sbjct: 179 GGPLGEV 185


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  282 bits (721), Expect = 1e-75
 Identities = 141/184 (76%), Positives = 148/184 (80%)
 Frame = +3

Query: 75  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLG 254
           MA +T+  S+F GQ             V     RV MR + KSAP  SIWYG DRP YLG
Sbjct: 1   MATSTIQQSAFAGQTLLKPQNELVRK-VGGNGGRVSMRRTIKSAPE-SIWYGPDRPKYLG 58

Query: 255 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 434
           PFS   PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA
Sbjct: 59  PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118

Query: 435 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 614
           KNGVKFGEAVWFKAGSQIF +GGLDYLGNP+LVHAQSILAIWACQV+LMGAVEGYRV GG
Sbjct: 119 KNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGG 178

Query: 615 PLGE 626
           PLGE
Sbjct: 179 PLGE 182


>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2,
           chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R
           PE=2 SV=2
          Length = 261

 Score =  281 bits (720), Expect = 1e-75
 Identities = 135/158 (85%), Positives = 143/158 (90%), Gaps = 3/158 (1%)
 Frame = +3

Query: 165 GEARVQMRSSK---KSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSA 335
           GE R+ MR S    K A SGS WYGADR LYLGP SG PPSYLTGEFPGDYGWDTAGLSA
Sbjct: 23  GEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 82

Query: 336 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYL 515
           DPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYL
Sbjct: 83  DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 142

Query: 516 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 629
           GNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGEV
Sbjct: 143 GNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEV 180
tr_hit_id Q9M600
Definition tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphorbia esula
Align length 188
Score (bit) 289.0
E-value 1.0e-76
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955484|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_D13, 5'
         (631 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   289   1e-76
tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB OS=T...   287   3e-76
tr|Q32291|Q32291_GOSHI Chlorophyll A/B binding protein OS=Gossyp...   286   5e-76
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   286   5e-76
tr|B6T2Y9|B6T2Y9_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   286   7e-76
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   286   9e-76
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   285   1e-75
tr|Q84U94|Q84U94_CITLI Chlorophyll a/b-binding protein (Fragment...   285   1e-75
tr|Q40247|Q40247_LACSA Light-harvesting chlorophyll a/b-binding ...   285   1e-75
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   285   1e-75
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten...   285   1e-75
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   285   1e-75
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   285   2e-75
tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ...   285   2e-75
tr|Q8W0E6|Q8W0E6_ORYSJ cDNA clone:001-013-E06, full insert seque...   285   2e-75
tr|Q41423|Q41423_SOLTU Chlorophyll a/b binding protein OS=Solanu...   285   2e-75
tr|Q41422|Q41422_SOLTU Chlorophyll a/b binding protein OS=Solanu...   285   2e-75
tr|B4FQ80|B4FQ80_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   285   2e-75
tr|A2WUJ5|A2WUJ5_ORYSI Putative uncharacterized protein OS=Oryza...   285   2e-75
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu...   284   3e-75
tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiant...   284   4e-75
tr|Q1EP45|Q1EP45_MUSBA Chlorophyll A-B binding protein (CAB), pu...   284   4e-75
tr|O64447|O64447_NICSY Light harvesting chlorophyll a/b-binding ...   284   4e-75
tr|B4G143|B4G143_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   284   4e-75
tr|B0L806|B0L806_9POAL Chloroplast chlorophyll a/b binding prote...   283   5e-75
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   283   5e-75
tr|A7QQL7|A7QQL7_VITVI Chromosome undetermined scaffold_143, who...   283   5e-75
tr|A5BAI4|A5BAI4_VITVI Putative uncharacterized protein (Chromos...   283   5e-75
tr|A5B5I4|A5B5I4_VITVI Putative uncharacterized protein OS=Vitis...   283   5e-75
tr|Q41425|Q41425_SOLTU Chlorophyll a/b binding protein OS=Solanu...   283   6e-75

>tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphorbia
           esula PE=2 SV=1
          Length = 268

 Score =  289 bits (739), Expect = 1e-76
 Identities = 143/188 (76%), Positives = 155/188 (82%), Gaps = 2/188 (1%)
 Frame = +3

Query: 72  AMAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMR--SSKKSAPSGSIWYGADRPL 245
           A ++  + S SF GQA               G  RV MR  ++KK APSGS WYG DR  
Sbjct: 3   ASSSMALSSPSFAGQAVKLSPSSASELM---GNGRVSMRKAATKKVAPSGSPWYGPDRVK 59

Query: 246 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPE 425
           YLGPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE
Sbjct: 60  YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 119

Query: 426 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 605
           LLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+
Sbjct: 120 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 179

Query: 606 AGGPLGEV 629
           AGGPLGEV
Sbjct: 180 AGGPLGEV 187


>tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB
           OS=Triticum aestivum GN=Wcab PE=2 SV=1
          Length = 266

 Score =  287 bits (735), Expect = 3e-76
 Identities = 146/190 (76%), Positives = 156/190 (82%), Gaps = 5/190 (2%)
 Frame = +3

Query: 75  MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSK---KSAPSGSIWYGADR 239
           MAAAT+   SS+F G+A               GEARV MR +    K   SGS WYGADR
Sbjct: 1   MAAATMSLSSSTFAGKAVKNVPSL-----ALLGEARVTMRKTAAKAKQVSSGSPWYGADR 55

Query: 240 PLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVT 419
            LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV 
Sbjct: 56  VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVF 115

Query: 420 PELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGY 599
           PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGY
Sbjct: 116 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGY 175

Query: 600 RVAGGPLGEV 629
           RVAGGPLGE+
Sbjct: 176 RVAGGPLGEI 185


>tr|Q32291|Q32291_GOSHI Chlorophyll A/B binding protein OS=Gossypium
           hirsutum PE=3 SV=1
          Length = 264

 Score =  286 bits (733), Expect = 5e-76
 Identities = 134/155 (86%), Positives = 141/155 (90%)
 Frame = +3

Query: 165 GEARVQMRSSKKSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPE 344
           G  RV MR + K  PSGS WYG DR LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 29  GTGRVSMRKTTKPVPSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 88

Query: 345 TFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNP 524
           TFA+NRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNP
Sbjct: 89  TFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 148

Query: 525 SLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 629
           SL+HAQSILAIWACQVILMGAVEGYR+AGGPLGEV
Sbjct: 149 SLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEV 183


>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  286 bits (733), Expect = 5e-76
 Identities = 143/185 (77%), Positives = 153/185 (82%)
 Frame = +3

Query: 75  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLG 254
           MAAAT + S+ +               V   EARV MR   KS+ S SIWYGADRP +LG
Sbjct: 1   MAAATAMHSTTLAGQSLLKPVNELSRKVGTSEARVSMR---KSSGSDSIWYGADRPKFLG 57

Query: 255 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 434
           PFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLA
Sbjct: 58  PFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLA 117

Query: 435 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 614
           KNGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG
Sbjct: 118 KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 177

Query: 615 PLGEV 629
           PLGEV
Sbjct: 178 PLGEV 182


>tr|B6T2Y9|B6T2Y9_MAIZE Chlorophyll a-b binding protein 2 OS=Zea
           mays PE=2 SV=1
          Length = 264

 Score =  286 bits (732), Expect = 7e-76
 Identities = 138/158 (87%), Positives = 144/158 (91%), Gaps = 3/158 (1%)
 Frame = +3

Query: 165 GEARVQMRSSK---KSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSA 335
           GE R+ MR +    K A SGS WYGADR LYLGP SGSPPSYLTGEFPGDYGWDTAGLSA
Sbjct: 26  GEGRITMRKTAAKPKPAASGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTAGLSA 85

Query: 336 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYL 515
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYL
Sbjct: 86  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 145

Query: 516 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 629
           GNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV
Sbjct: 146 GNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 183


>tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanum
           tuberosum GN=Lhcb1-2 PE=4 SV=1
          Length = 265

 Score =  286 bits (731), Expect = 9e-76
 Identities = 145/188 (77%), Positives = 154/188 (81%), Gaps = 3/188 (1%)
 Frame = +3

Query: 75  MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPL 245
           MAAAT+   S SF GQA              +G  R+ MR +  KSAPS S WYG DR  
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEI----SGNGRITMRKAVAKSAPSSSPWYGPDRVK 56

Query: 246 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPE 425
           YLGPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE
Sbjct: 57  YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 116

Query: 426 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 605
           LLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+
Sbjct: 117 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 176

Query: 606 AGGPLGEV 629
           AGGPLGEV
Sbjct: 177 AGGPLGEV 184


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  285 bits (730), Expect = 1e-75
 Identities = 140/184 (76%), Positives = 155/184 (84%), Gaps = 1/184 (0%)
 Frame = +3

Query: 81  AATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPLYLGP 257
           AAT ++S+ +               V AGEARV MR +  KS+ S SIWYGADRP +LGP
Sbjct: 4   AATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGP 63

Query: 258 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAK 437
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK
Sbjct: 64  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 123

Query: 438 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 617
           +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP
Sbjct: 124 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 183

Query: 618 LGEV 629
           LG+V
Sbjct: 184 LGDV 187


>tr|Q84U94|Q84U94_CITLI Chlorophyll a/b-binding protein (Fragment)
           OS=Citrus limon PE=4 SV=1
          Length = 216

 Score =  285 bits (730), Expect = 1e-75
 Identities = 143/187 (76%), Positives = 155/187 (82%), Gaps = 2/187 (1%)
 Frame = +3

Query: 75  MAAATV-LSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPLY 248
           MA AT+ LSSSFVG+A              +   R+ MR +  KS  SGS WYG DR  Y
Sbjct: 1   MATATMALSSSFVGKAVNLAPSGNEL----SNGGRISMRKTGSKSVSSGSPWYGPDRVKY 56

Query: 249 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPEL 428
           LGPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL
Sbjct: 57  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116

Query: 429 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 608
           LA+NGVKFGEAVWFKAG+QIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+A
Sbjct: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176

Query: 609 GGPLGEV 629
           GGPLGEV
Sbjct: 177 GGPLGEV 183


>tr|Q40247|Q40247_LACSA Light-harvesting chlorophyll a/b-binding
           protein (LHCP) OS=Lactuca sativa GN=cab PE=2 SV=1
          Length = 266

 Score =  285 bits (730), Expect = 1e-75
 Identities = 146/189 (77%), Positives = 156/189 (82%), Gaps = 4/189 (2%)
 Frame = +3

Query: 75  MAAATV-LSSSFVGQAXXXXXXXXXXXXVTAGEARVQMR---SSKKSAPSGSIWYGADRP 242
           MAA+T+ LSS F GQA               G  RV MR   ++KK+APSGS WYG DR 
Sbjct: 1   MAASTMALSSPFAGQAVKTSPSSSELF----GNGRVSMRKTAAAKKAAPSGSPWYGPDRV 56

Query: 243 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTP 422
            YLGPFSG  PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV P
Sbjct: 57  KYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFP 116

Query: 423 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 602
           ELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR
Sbjct: 117 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 176

Query: 603 VAGGPLGEV 629
           +AGGPLGEV
Sbjct: 177 IAGGPLGEV 185


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
           protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
          Length = 270

 Score =  285 bits (730), Expect = 1e-75
 Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 3/188 (1%)
 Frame = +3

Query: 75  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMR---SSKKSAPSGSIWYGADRPL 245
           MA+A V SS+F GQ                GE R+ MR   S K  A SGS WYG DR  
Sbjct: 4   MASAGVASSAFAGQIVLKPQNEFVGG--VHGEGRITMRKTASKKVVASSGSPWYGPDRVK 61

Query: 246 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPE 425
           YLGPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE
Sbjct: 62  YLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 121

Query: 426 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 605
           LL++NGVKFGEAVWFKAGSQIF+DGGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+
Sbjct: 122 LLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRI 181

Query: 606 AGGPLGEV 629
           AGGPLGE+
Sbjct: 182 AGGPLGEI 189