DK955491 [AcEST]

DK955491
Clone id	TST39A01NGRL0023_D20
Library	TST39
Length	603
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_D20. 5' end sequence.
Accession	DK955491
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL941Contig1
Sequence	GAAACCTCCGATGGAGAAGCCGCCGATGGAGAAGCCTCCGATGGAGAAGCCGCCGATGGA GAAGCCGCCTATGGAGAAACCTCCGATGGAGAAGCCGCCGATGGAGAAGCCTCCGATGGA GAAGCCCCCAGTGTACAAACCCCCGGTGGAGAAGCCACCTGTGTACAAACCCCCTTTCTA CAAGCCCGGCCCCTACTACAAGCACCCCTCCTTCCCTAAGTTCAAATTCCCAAAATTCAC CATTCCCAAGTTCAAGCTGCCTAAGTTTAAGCTACCCAAGTTTAAGCTGCCCTCGTACAA GCCCAGCTATCCCAAATACAAGTACCCCCACTAGGAAATCCCCAGCACTGATCGCTCGCA CTTACAACGACTGCCTCCCATCCCCTCGCCTCAACCGCCACCAGCTCCTGTATTATCCTC CCTTCCGGCTTTGCTACTATTTCAACTATTCTTTATAACGTGGTCATATTTTACTTTATC CGTCCAAAATAGTTGTGTGTCTACTCCCATGATCCGCTGATCCGAGGTCGACTCTTCTGT GTCATGTATATTATCTTATCGTCGACATGCACACGGTTTGCTGTCTCGACTAGTCGTATG ATC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q8IIG1
Definition	sp\|Q8IIG1\|YK213_PLAF7 Uncharacterized protein PF11_0213 OS=Plasmodium falciparum (isolate 3D7)
Align length	40
Score (bit)	31.6
E-value	3.3
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK955491\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_D20, 5' (603 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q8IIG1\|YK213_PLAF7 Uncharacterized protein PF11_0213 OS=Plasm... 32 3.3 sp\|Q18673\|NEPL1_CAEEL Neprilysin-1 OS=Caenorhabditis elegans GN=... 31 4.2 sp\|Q9SX97\|DOF16_ARATH Dof zinc finger protein DOF1.6 OS=Arabidop... 30 7.2 >sp\|Q8IIG1\|YK213_PLAF7 Uncharacterized protein PF11_0213 OS=Plasmodium falciparum (isolate 3D7) GN=PF11_0213 PE=2 SV=1 Length = 2616 Score = 31.6 bits (70), Expect = 3.3 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -1 Query: 543 DTEESTSDQRIMGVDTQLFWTDKVKYDHVIKNS*NSSKAG 424 D + +I GVD Q+ T K+KYD KN+ N K+G Sbjct: 1765 DDDHMCDVTKIKGVDKQMSDTHKIKYDDNEKNNENKRKSG 1804 >sp\|Q18673\|NEPL1_CAEEL Neprilysin-1 OS=Caenorhabditis elegans GN=nep-1 PE=1 SV=3 Length = 754 Score = 31.2 bits (69), Expect = 4.2 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +3 Query: 315 NTSTPTRKSPALIARTYNDCLPSPRLN 395 NTS PT KS ALI + YN C+ + + N Sbjct: 132 NTSIPTSKSIALIKQIYNTCMDTEKHN 158 >sp\|Q9SX97\|DOF16_ARATH Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6 PE=2 SV=1 Length = 209 Score = 30.4 bits (67), Expect = 7.2 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Frame = +3 Query: 303 PAIPNTSTPTRKSPALIA---RTYNDCLPSPRLNRHQLLYYPPFRLCYYFNYSL 455 P+ PN + PTR P+ A + LP PR N + CYY NY+L Sbjct: 2 PSEPNQTRPTRVQPSTAAYPPPNLAEPLPCPRCNS------TTTKFCYYNNYNL 49
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK955491\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_D20, 5' (603 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****