DK955495 |
Clone id |
TST39A01NGRL0023_D24 |
Library |
TST39 |
Length |
497 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_D24. 5' end sequence. |
Accession |
DK955495 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL385Contig1 |
Sequence |
GCCTTTGAGTGTATCGTCTGCAAACGCGCATCGTCAGGTGACTGCTAGGGCTTTTTCACG TCCTTCCGCTCTGCGATCGGCCTCTCTTCTTCTCTCCGAGCGCCAGTTTTCAGATCGCAC CTCGTCTTTCATAAGTTTTGGATTCAGTGGTGACATTCTGTCTTTGAGAACGGATTTTGG CAAGGTCCACCCTTTTGGCTGCCATGTCGGCGGTGGTTTGTGGCAAGCGGTCTCTCTTTG ACGAAATTCACCCCCCTATTCCAAAGAGGCTTCGCTGTGGAGGAGGAACTTCTCCTGTTC GATTTGCTTCCTTGAGGAGTGGTTCTCCTGTGGGCTCTTGTGAAGCAGGCTCACCTTCTC TATCTGACTTGTCAGACCAACTTTCCCATCTGAGAACCCTTTTTCCTGAGATGGATGGGC AGCTAATTGAAAAGGTCTTGGAGTCTAGTGGAAACAACCTTGACTCTGCAATACGAAGTC TCAATGAGCTTCGGCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P62501 |
Definition |
sp|P62501|T22D1_RAT TSC22 domain family protein 1 OS=Rattus norvegicus |
Align length |
61 |
Score (bit) |
34.7 |
E-value |
0.25 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NV65 |
Definition |
tr|A9NV65|A9NV65_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
100 |
Score (bit) |
90.9 |
E-value |
3.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955495|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_D24, 5' (497 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NV65|A9NV65_PICSI Putative uncharacterized protein OS=Picea... 91 3e-17 tr|A9T5N7|A9T5N7_PHYPA Predicted protein OS=Physcomitrella paten... 85 2e-15 tr|A7PF87|A7PF87_VITVI Chromosome chr11 scaffold_13, whole genom... 84 5e-15 tr|A9PBC1|A9PBC1_POPTR Putative uncharacterized protein OS=Popul... 83 6e-15 tr|A9PHI2|A9PHI2_POPTR Putative uncharacterized protein OS=Popul... 80 4e-14 tr|A9U3T0|A9U3T0_PHYPA Predicted protein OS=Physcomitrella paten... 79 9e-14 tr|Q94K99|Q94K99_ARATH Putative uncharacterized protein At5g3244... 71 3e-11 tr|Q8H1Q3|Q8H1Q3_ARATH Putative uncharacterized protein At5g3244... 71 3e-11 tr|B3H6U1|B3H6U1_ARATH Uncharacterized protein At5g32440.2 OS=Ar... 71 3e-11 tr|B6TIC6|B6TIC6_MAIZE CUE domain containing protein OS=Zea mays... 66 1e-09 tr|B6TCB4|B6TCB4_MAIZE CUE domain containing protein OS=Zea mays... 63 7e-09 tr|B4FYB7|B4FYB7_MAIZE Putative uncharacterized protein OS=Zea m... 63 7e-09 tr|B6T3P8|B6T3P8_MAIZE CUE domain containing protein OS=Zea mays... 57 5e-07 tr|B4G1V5|B4G1V5_MAIZE Putative uncharacterized protein OS=Zea m... 55 1e-06 tr|A3A3V8|A3A3V8_ORYSJ Putative uncharacterized protein OS=Oryza... 54 5e-06 tr|A2X1Q4|A2X1Q4_ORYSI Putative uncharacterized protein OS=Oryza... 54 5e-06 tr|Q67WV6|Q67WV6_ORYSJ Os06g0642900 protein OS=Oryza sativa subs... 53 9e-06 tr|Q6UUK2|Q6UUK2_ORYSJ Putative uncharacterized protein (Putativ... 49 1e-04 tr|A7PNK4|A7PNK4_VITVI Chromosome chr8 scaffold_23, whole genome... 48 2e-04 tr|A7QIK9|A7QIK9_VITVI Chromosome chr9 scaffold_104, whole genom... 44 0.006 tr|A5B8J1|A5B8J1_VITVI Putative uncharacterized protein OS=Vitis... 44 0.006 tr|Q0E3B5|Q0E3B5_ORYSJ Os02g0184500 protein OS=Oryza sativa subs... 41 0.027 tr|Q6H880|Q6H880_ORYSJ Putative uncharacterized protein OJ1572_F... 40 0.080 tr|Q0J3G0|Q0J3G0_ORYSJ Os09g0119100 protein OS=Oryza sativa subs... 35 1.5 tr|A3BW42|A3BW42_ORYSJ Putative uncharacterized protein OS=Oryza... 35 1.5 tr|A2YYJ3|A2YYJ3_ORYSI Putative uncharacterized protein OS=Oryza... 35 1.5 tr|B2B4H6|B2B4H6_PODAN Predicted CDS Pa_2_1300 OS=Podospora anse... 35 1.5 tr|B8B0S4|B8B0S4_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.0 tr|Q6INE3|Q6INE3_XENLA MGC83221 protein OS=Xenopus laevis GN=tol... 35 2.6 tr|Q6DFR0|Q6DFR0_XENTR Toll interacting protein OS=Xenopus tropi... 35 2.6
>tr|A9NV65|A9NV65_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 289
Score = 90.9 bits (224), Expect = 3e-17 Identities = 50/100 (50%), Positives = 63/100 (63%), Gaps = 2/100 (2%) Frame = +3
Query: 204 MSAVVCGKRSLFDEIH--PPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXXX 377 MSA+VCGKRSLF+++H PPI KRLRC G SP+RF++ + + Sbjct: 1 MSALVCGKRSLFEDLHTPPPISKRLRCSGSNSPIRFSANSPTRSPTATDIHHQNQSTEIH 60
Query: 378 XXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRL 497 R LFP+MD Q +E VLES GN+L SAI+SLNELRL Sbjct: 61 HLSQLRGLFPDMDEQHLEAVLESCGNDLASAIKSLNELRL 100
>tr|A9T5N7|A9T5N7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_191879 PE=4 SV=1 Length = 287
Score = 85.1 bits (209), Expect = 2e-15 Identities = 50/100 (50%), Positives = 61/100 (61%), Gaps = 2/100 (2%) Frame = +3
Query: 204 MSAVVCGKRSLFDEIH--PPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXXX 377 MSA VCGKRSLF+++ PPI KRLR G SP+ FAS S P GS + Sbjct: 1 MSAAVCGKRSLFEDLRSSPPISKRLRFAQGNSPIWFASATSSPPSGSSPS-FEPRLEAGL 59
Query: 378 XXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRL 497 LFP+M+ Q +EKVLE+S N+LD AI+SLN LRL Sbjct: 60 LLSQLHALFPDMEEQAVEKVLEASNNDLDYAIKSLNLLRL 99
>tr|A7PF87|A7PF87_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016953001 PE=4 SV=1 Length = 283
Score = 83.6 bits (205), Expect = 5e-15 Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 2/100 (2%) Frame = +3
Query: 204 MSAVVCGKRSLFDEIH--PPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXXX 377 MSA+VCGKRS F+++ PP+ KR+RC +SPVRF+ RS + + + Sbjct: 1 MSAIVCGKRSFFEDLPTTPPVSKRIRCSS-SSPVRFSPPRS---ISASPSQSQSTASQAS 56
Query: 378 XXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRL 497 R LFP+MD Q +EK LE GN+LDS I+SLNELRL Sbjct: 57 VLDHLRALFPDMDKQFLEKALEECGNDLDSTIKSLNELRL 96
>tr|A9PBC1|A9PBC1_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 286
Score = 83.2 bits (204), Expect = 6e-15 Identities = 49/103 (47%), Positives = 65/103 (63%), Gaps = 5/103 (4%) Frame = +3
Query: 204 MSAVVCGKRSLFDEI---HPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 374 MSA+VCGKRS F+E+ PP+ KR+RC +SPVRF+ RS + + + Sbjct: 1 MSAIVCGKRSFFEELTVTSPPVSKRIRCSS-SSPVRFSPPRSNTLASNPPSFNFGSSSSS 59
Query: 375 XXXXXXR--TLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRL 497 + +FP+MD QLIEKVLE G++LDSAIRSLN+LRL Sbjct: 60 SSTLIEQLAAIFPDMDKQLIEKVLEECGDDLDSAIRSLNDLRL 102
>tr|A9PHI2|A9PHI2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 285
Score = 80.5 bits (197), Expect = 4e-14 Identities = 50/104 (48%), Positives = 63/104 (60%), Gaps = 6/104 (5%) Frame = +3
Query: 204 MSAVVCGKRSLFDEI---HPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 374 MSA+VCGKRS F+E+ PP+ KR+RC +SPVRF+ RS + + S A Sbjct: 1 MSAIVCGKRSFFEELTVTSPPVSKRIRCSS-SSPVRFSPPRSNT-IASNPASFNFSSSSS 58
Query: 375 XXXXXXRTL---FPEMDGQLIEKVLESSGNNLDSAIRSLNELRL 497 L FP+MD QL+EK LE G++LD AIRSLNELRL Sbjct: 59 SSSAFVEQLAAIFPDMDKQLLEKALEECGDDLDLAIRSLNELRL 102
>tr|A9U3T0|A9U3T0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228060 PE=4 SV=1 Length = 285
Score = 79.3 bits (194), Expect = 9e-14 Identities = 47/100 (47%), Positives = 59/100 (59%), Gaps = 2/100 (2%) Frame = +3
Query: 204 MSAVVCGKRSLFDEIH--PPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXXX 377 MSA VCGKRSLF+++H PP KRLR G SP+ FA+ S P GS Sbjct: 1 MSAAVCGKRSLFEDLHCSPPTSKRLRFAQGNSPLWFATATSTPPSGSSPC-FELRPEADL 59
Query: 378 XXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRL 497 LFP+M+ ++EKVL +S N+LD AI+SLN LRL Sbjct: 60 LLSQLHALFPDMEEHVVEKVLGASNNDLDYAIKSLNLLRL 99
>tr|Q94K99|Q94K99_ARATH Putative uncharacterized protein At5g32440 OS=Arabidopsis thaliana GN=At5g32440 PE=2 SV=1 Length = 264
Score = 70.9 bits (172), Expect = 3e-11 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 3/101 (2%) Frame = +3
Query: 204 MSAVVCGKRSLFDEI---HPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 374 MSA+VCGKRSLF+++ PP+ K+LRC +S RF+ P+ + Sbjct: 1 MSAIVCGKRSLFEDLAAASPPVSKKLRCFSSSSSSRFSP-----PIPPSSS--------- 46
Query: 375 XXXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRL 497 +FP+MD Q++E+ +E G++LDSAIR LN+LRL Sbjct: 47 LLLDHLAAIFPDMDRQILERAIEECGDDLDSAIRCLNQLRL 87
>tr|Q8H1Q3|Q8H1Q3_ARATH Putative uncharacterized protein At5g32440 OS=Arabidopsis thaliana GN=At5g32440 PE=2 SV=1 Length = 264
Score = 70.9 bits (172), Expect = 3e-11 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 3/101 (2%) Frame = +3
Query: 204 MSAVVCGKRSLFDEI---HPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 374 MSA+VCGKRSLF+++ PP+ K+LRC +S RF+ P+ + Sbjct: 1 MSAIVCGKRSLFEDLAAASPPVSKKLRCFSSSSSSRFSP-----PIPPSSS--------- 46
Query: 375 XXXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRL 497 +FP+MD Q++E+ +E G++LDSAIR LN+LRL Sbjct: 47 LLLDHLAAIFPDMDKQILERAIEECGDDLDSAIRCLNQLRL 87
>tr|B3H6U1|B3H6U1_ARATH Uncharacterized protein At5g32440.2 OS=Arabidopsis thaliana GN=At5g32440 PE=4 SV=1 Length = 187
Score = 70.9 bits (172), Expect = 3e-11 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 3/101 (2%) Frame = +3
Query: 204 MSAVVCGKRSLFDEI---HPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 374 MSA+VCGKRSLF+++ PP+ K+LRC +S RF+ P+ + Sbjct: 1 MSAIVCGKRSLFEDLAAASPPVSKKLRCFSSSSSSRFSP-----PIPPSSS--------- 46
Query: 375 XXXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRL 497 +FP+MD Q++E+ +E G++LDSAIR LN+LRL Sbjct: 47 LLLDHLAAIFPDMDKQILERAIEECGDDLDSAIRCLNQLRL 87
>tr|B6TIC6|B6TIC6_MAIZE CUE domain containing protein OS=Zea mays PE=2 SV=1 Length = 282
Score = 65.9 bits (159), Expect = 1e-09 Identities = 47/101 (46%), Positives = 56/101 (55%), Gaps = 3/101 (2%) Frame = +3
Query: 204 MSAVVCGKRS---LFDEIHPPIPKRLRCGGGTSPVRFASLRSGSPVGSCEAGXXXXXXXX 374 MSAVVCGKRS DE+ PP P +P R S RS S GS + Sbjct: 1 MSAVVCGKRSSSIFADELLPPSPTSPHSSHQPAPKR--SRRSPSHRGSSDGHRREALVHH 58
Query: 375 XXXXXXRTLFPEMDGQLIEKVLESSGNNLDSAIRSLNELRL 497 LFP+MD QL+EK LE+SG++LDSAI+SLN LRL Sbjct: 59 LLL-----LFPDMDPQLLEKALEASGDDLDSAIKSLNLLRL 94
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