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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955506
Clone id TST39A01NGRL0023_E13
Library
Length 532
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_E13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
ATCACATCCCCATATTGAGTACGTCAATCTCTCTGACAATTATTAAGCCAATGCAACTCC
TCGATCTGATCTCATGATCTAGTGCAGCTGCTCAATATTTATACACACACACACACACAC
ACTCCGCAGACCGGCTGATCAGCCAGCTGCTAGCTTATTCCCATGGCAGCGTCCAACATT
GGTACCGACTCTGTTGGCACACCGGGCAACTCCTTACATGGCGTGACTGGCCATGAGCCC
ACCTTCTCCTTCGCTGTGAGCAAGGATGGTGCAGGGGAATCGGCCACCCCGCAGCGCTTC
TCATTGCCCGTCGACTCGGAGAACAAGGCCAAAAAGATCAAGCTCTGGTCGCTGGCACCA
CCTCACATGCGCACATTCCACCTCTCGTGGATTTCCTTCTTTACTTGCTTCGTCTCCAGC
TTTGCGGCTGCGCCGCTTCTGCCAGTCATTCGCGACAACCTGGACCTCACCAAGAAAGAC
ATTGGAAATGCCGGCATTGCGTCTGTGTCAGGCTCCATCGCAACTCGTCTGC
■■Homology search results ■■ -
sp_hit_id P22152
Definition sp|P22152|CRNA_EMENI Nitrate transporter OS=Emericella nidulans
Align length 78
Score (bit) 44.7
E-value 0.0003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955506|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_E13, 5'
         (532 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P22152|CRNA_EMENI Nitrate transporter OS=Emericella nidulans ...    45   3e-04
sp|Q65IA6|FTHS_BACLD Formate--tetrahydrofolate ligase OS=Bacillu...    30   7.2  
sp|Q2S9T9|SYI_HAHCH Isoleucyl-tRNA synthetase OS=Hahella chejuen...    30   9.4  

>sp|P22152|CRNA_EMENI Nitrate transporter OS=Emericella nidulans
           GN=crnA PE=2 SV=2
          Length = 507

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
 Frame = +1

Query: 307 PVDSENKAKKIKLWSLAP--PHMRTFHLSWISFFTCFVSSFAAAPLLPV-IRDNLDLTKK 477
           P  + N  K + +  L P   + R F  SW  F   F+S +A  PLL V IRD+LD+++ 
Sbjct: 11  PEVNPNNRKALTIPVLNPFNTYGRVFFFSWFGFMLAFLSWYAFPPLLTVTIRDDLDMSQT 70

Query: 478 DIGNAGIASVSGSIATRL 531
            I N+ I ++  ++  RL
Sbjct: 71  QIANSNIIALLATLLVRL 88


>sp|Q65IA6|FTHS_BACLD Formate--tetrahydrofolate ligase OS=Bacillus
           licheniformis (strain DSM 13 / ATCC 14580) GN=fhs PE=3
           SV=1
          Length = 559

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +3

Query: 264 GWCRGIGHPAALLIARRLGEQGQKDQA 344
           GWCR  GHPAAL      G +G  D A
Sbjct: 397 GWCRDNGHPAALCNVWEEGGKGGTDLA 423


>sp|Q2S9T9|SYI_HAHCH Isoleucyl-tRNA synthetase OS=Hahella chejuensis
           (strain KCTC 2396) GN=ileS PE=3 SV=1
          Length = 941

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
 Frame = +3

Query: 99  LYTHTHTHSADRLISQLLA-----YSHGSVQHWYRLCWHTGQLLTWRDWP 233
           L+   H +  D  + ++L       SHG + H Y  CW T   L +R  P
Sbjct: 373 LFAGEHVYKVDDHVIEVLKERGRLLSHGKITHSYAHCWRTKTPLIYRATP 422
tr_hit_id B8AGH0
Definition tr|B8AGH0|B8AGH0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 116
Score (bit) 163.0
E-value 4.0e-39
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955506|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_E13, 5'
         (532 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8AGH0|B8AGH0_ORYSI Putative uncharacterized protein OS=Oryza...   163   4e-39
tr|A2X013|A2X013_ORYSI Putative uncharacterized protein OS=Oryza...   163   4e-39
tr|Q6ZH34|Q6ZH34_ORYSJ Os02g0112100 protein OS=Oryza sativa subs...   163   6e-39
tr|O82138|O82138_ORYSA High affinity nitrate transporter OS=Oryz...   163   6e-39
tr|A3A2D3|A3A2D3_ORYSJ Putative uncharacterized protein OS=Oryza...   163   6e-39
tr|Q84VI9|Q84VI9_MAIZE Putative high affinity nitrate transporte...   162   8e-39
tr|Q84LK4|Q84LK4_PHRAU Putative high affinity nitrate transporte...   162   8e-39
tr|Q53CL7|Q53CL7_MAIZE Putative high affinity nitrate transporte...   162   8e-39
tr|B4FSV9|B4FSV9_MAIZE Putative uncharacterized protein OS=Zea m...   162   8e-39
tr|A6QKV9|A6QKV9_MAIZE Putative high affinity nitrate transporte...   162   8e-39
tr|A5JUX2|A5JUX2_9ROSI Nitrate transporter OS=Citrus sinensis x ...   162   1e-38
tr|Q6PRP8|Q6PRP8_CUCSA High-affinity nitrate transporter OS=Cucu...   160   4e-38
tr|Q76IJ7|Q76IJ7_PRUPE High-affinity nitrate transporter (Nitrat...   158   1e-37
tr|Q76IH8|Q76IH8_PRUPE High-affinity nitrate transporter (Nitrat...   158   1e-37
tr|A7PT65|A7PT65_VITVI Chromosome chr8 scaffold_29, whole genome...   158   1e-37
tr|Q5K410|Q5K410_9ROSI Nitrate transporter OS=Populus tremula x ...   158   2e-37
tr|O64999|O64999_SOYBN Putative high affinity nitrate transporte...   156   7e-37
tr|Q9FY39|Q9FY39_BRANA High-affinity nitrate transporter OS=Bras...   155   2e-36
tr|A7PQU1|A7PQU1_VITVI Chromosome chr6 scaffold_25, whole genome...   155   2e-36
tr|A5BMD0|A5BMD0_VITVI Putative uncharacterized protein OS=Vitis...   155   2e-36
tr|Q9ARC5|Q9ARC5_LOTJA Membrane transporter OS=Lotus japonicus G...   153   5e-36
tr|Q9FJH8|Q9FJH8_ARATH High affinity nitrate transporter OS=Arab...   153   6e-36
tr|O82811|O82811_ARATH High-affinity nitrate transporter ACH1 (N...   152   1e-35
tr|Q9LMZ9|Q9LMZ9_ARATH T6D22.18 OS=Arabidopsis thaliana GN=At1g0...   151   2e-35
tr|Q9SQG7|Q9SQG7_SOLLC Putative high-affinity nitrate transporte...   149   7e-35
tr|O82412|O82412_ARATH High-affinity nitrate transporter ACH2 OS...   148   1e-34
tr|Q9SQG6|Q9SQG6_SOLLC Putative high-affinity nitrate transporte...   147   3e-34
tr|Q76C04|Q76C04_PHYPA Nitrate transporter OS=Physcomitrella pat...   147   4e-34
tr|Q84MZ8|Q84MZ8_TOBAC High affinity nitrate transporter protein...   146   6e-34
tr|Q9LXH0|Q9LXH0_ARATH High-affinity nitrate transporter-like pr...   146   7e-34

>tr|B8AGH0|B8AGH0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05554 PE=4 SV=1
          Length = 478

 Score =  163 bits (413), Expect = 4e-39
 Identities = 79/116 (68%), Positives = 98/116 (84%)
 Frame = +1

Query: 184 TDSVGTPGNSLHGVTGHEPTFSFAVSKDGAGESATPQRFSLPVDSENKAKKIKLWSLAPP 363
           + +VG PG+SLHGVTG EP F+F+ ++ G  ++A   +F LPVDSE+KAK I+L S A P
Sbjct: 3   SSTVGAPGSSLHGVTGREPAFAFS-TEVGGDDAAAASKFDLPVDSEHKAKTIRLLSFANP 61

Query: 364 HMRTFHLSWISFFTCFVSSFAAAPLLPVIRDNLDLTKKDIGNAGIASVSGSIATRL 531
           HMRTFHLSWISFF+CFVS+FAAAPL+P+IRDNL+LTK DIGNAG+ASVSGSI +RL
Sbjct: 62  HMRTFHLSWISFFSCFVSTFAAAPLVPIIRDNLNLTKADIGNAGVASVSGSIFSRL 117


>tr|A2X013|A2X013_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05552 PE=4 SV=1
          Length = 533

 Score =  163 bits (413), Expect = 4e-39
 Identities = 79/116 (68%), Positives = 98/116 (84%)
 Frame = +1

Query: 184 TDSVGTPGNSLHGVTGHEPTFSFAVSKDGAGESATPQRFSLPVDSENKAKKIKLWSLAPP 363
           + +VG PG+SLHGVTG EP F+F+ ++ G  ++A   +F LPVDSE+KAK I+L S A P
Sbjct: 3   SSTVGAPGSSLHGVTGREPAFAFS-TEVGGDDAAAASKFDLPVDSEHKAKTIRLLSFANP 61

Query: 364 HMRTFHLSWISFFTCFVSSFAAAPLLPVIRDNLDLTKKDIGNAGIASVSGSIATRL 531
           HMRTFHLSWISFF+CFVS+FAAAPL+P+IRDNL+LTK DIGNAG+ASVSGSI +RL
Sbjct: 62  HMRTFHLSWISFFSCFVSTFAAAPLVPIIRDNLNLTKADIGNAGVASVSGSIFSRL 117


>tr|Q6ZH34|Q6ZH34_ORYSJ Os02g0112100 protein OS=Oryza sativa subsp.
           japonica GN=OJ1399_H05.5 PE=2 SV=1
          Length = 533

 Score =  163 bits (412), Expect = 6e-39
 Identities = 79/116 (68%), Positives = 98/116 (84%)
 Frame = +1

Query: 184 TDSVGTPGNSLHGVTGHEPTFSFAVSKDGAGESATPQRFSLPVDSENKAKKIKLWSLAPP 363
           + +VG PG+SLHGVTG EP F+F+ ++ G  ++A   +F LPVDSE+KAK I+L S A P
Sbjct: 3   SSTVGAPGSSLHGVTGREPAFAFS-TEVGGEDAAAASKFDLPVDSEHKAKTIRLLSFANP 61

Query: 364 HMRTFHLSWISFFTCFVSSFAAAPLLPVIRDNLDLTKKDIGNAGIASVSGSIATRL 531
           HMRTFHLSWISFF+CFVS+FAAAPL+P+IRDNL+LTK DIGNAG+ASVSGSI +RL
Sbjct: 62  HMRTFHLSWISFFSCFVSTFAAAPLVPIIRDNLNLTKADIGNAGVASVSGSIFSRL 117


>tr|O82138|O82138_ORYSA High affinity nitrate transporter OS=Oryza
           sativa GN=Nrt2 PE=2 SV=1
          Length = 533

 Score =  163 bits (412), Expect = 6e-39
 Identities = 79/116 (68%), Positives = 98/116 (84%)
 Frame = +1

Query: 184 TDSVGTPGNSLHGVTGHEPTFSFAVSKDGAGESATPQRFSLPVDSENKAKKIKLWSLAPP 363
           + +VG PG+SLHGVTG EP F+F+ ++ G  ++A   +F LPVDSE+KAK I+L S A P
Sbjct: 3   SSTVGAPGSSLHGVTGREPAFAFS-TEVGGEDAAAASKFDLPVDSEHKAKTIRLLSFANP 61

Query: 364 HMRTFHLSWISFFTCFVSSFAAAPLLPVIRDNLDLTKKDIGNAGIASVSGSIATRL 531
           HMRTFHLSWISFF+CFVS+FAAAPL+P+IRDNL+LTK DIGNAG+ASVSGSI +RL
Sbjct: 62  HMRTFHLSWISFFSCFVSTFAAAPLVPIIRDNLNLTKADIGNAGVASVSGSIFSRL 117


>tr|A3A2D3|A3A2D3_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_004955 PE=4 SV=1
          Length = 830

 Score =  163 bits (412), Expect = 6e-39
 Identities = 79/116 (68%), Positives = 98/116 (84%)
 Frame = +1

Query: 184 TDSVGTPGNSLHGVTGHEPTFSFAVSKDGAGESATPQRFSLPVDSENKAKKIKLWSLAPP 363
           + +VG PG+SLHGVTG EP F+F+ ++ G  ++A   +F LPVDSE+KAK I+L S A P
Sbjct: 3   SSTVGAPGSSLHGVTGREPAFAFS-TEVGGEDAAAASKFDLPVDSEHKAKTIRLLSFANP 61

Query: 364 HMRTFHLSWISFFTCFVSSFAAAPLLPVIRDNLDLTKKDIGNAGIASVSGSIATRL 531
           HMRTFHLSWISFF+CFVS+FAAAPL+P+IRDNL+LTK DIGNAG+ASVSGSI +RL
Sbjct: 62  HMRTFHLSWISFFSCFVSTFAAAPLVPIIRDNLNLTKADIGNAGVASVSGSIFSRL 117


>tr|Q84VI9|Q84VI9_MAIZE Putative high affinity nitrate transporter
           OS=Zea mays GN=nrt2.1 PE=2 SV=1
          Length = 524

 Score =  162 bits (411), Expect = 8e-39
 Identities = 78/114 (68%), Positives = 96/114 (84%)
 Frame = +1

Query: 190 SVGTPGNSLHGVTGHEPTFSFAVSKDGAGESATPQRFSLPVDSENKAKKIKLWSLAPPHM 369
           +VG PG+SLHGVTG EP F+F+   + A  +    +F LPVDSE+KAK ++L+S+A PHM
Sbjct: 3   AVGAPGSSLHGVTGREPAFAFSTEHEEAASNGG--KFDLPVDSEHKAKSVRLFSVANPHM 60

Query: 370 RTFHLSWISFFTCFVSSFAAAPLLPVIRDNLDLTKKDIGNAGIASVSGSIATRL 531
           RTFHLSWISFFTCFVS+FAAAPL+P+IRDNL+LTK DIGNAG+ASVSGSI +RL
Sbjct: 61  RTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKADIGNAGVASVSGSIFSRL 114


>tr|Q84LK4|Q84LK4_PHRAU Putative high affinity nitrate transporter
           OS=Phragmites australis GN=NRT2 PE=2 SV=1
          Length = 523

 Score =  162 bits (411), Expect = 8e-39
 Identities = 80/113 (70%), Positives = 96/113 (84%)
 Frame = +1

Query: 193 VGTPGNSLHGVTGHEPTFSFAVSKDGAGESATPQRFSLPVDSENKAKKIKLWSLAPPHMR 372
           VG PG+SLHGVTG EP F+F+ S     ++A+  +F LPVDSE+KAK I+L+S A PHMR
Sbjct: 3   VGAPGSSLHGVTGREPAFAFSTSAVPDDDAAS--KFDLPVDSEHKAKSIRLFSFANPHMR 60

Query: 373 TFHLSWISFFTCFVSSFAAAPLLPVIRDNLDLTKKDIGNAGIASVSGSIATRL 531
           TFHLSWISFFTCFVS+FAAAPL+P+IRDNL+LTK DIGNAG+ASVSGSI +RL
Sbjct: 61  TFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKADIGNAGVASVSGSIFSRL 113


>tr|Q53CL7|Q53CL7_MAIZE Putative high affinity nitrate transporter
           OS=Zea mays GN=nrt2.2 PE=2 SV=1
          Length = 524

 Score =  162 bits (411), Expect = 8e-39
 Identities = 78/114 (68%), Positives = 96/114 (84%)
 Frame = +1

Query: 190 SVGTPGNSLHGVTGHEPTFSFAVSKDGAGESATPQRFSLPVDSENKAKKIKLWSLAPPHM 369
           +VG PG+SLHGVTG EP F+F+   + A  +    +F LPVDSE+KAK ++L+S+A PHM
Sbjct: 3   AVGAPGSSLHGVTGREPAFAFSTEHEEAASNGG--KFDLPVDSEHKAKSVRLFSVANPHM 60

Query: 370 RTFHLSWISFFTCFVSSFAAAPLLPVIRDNLDLTKKDIGNAGIASVSGSIATRL 531
           RTFHLSWISFFTCFVS+FAAAPL+P+IRDNL+LTK DIGNAG+ASVSGSI +RL
Sbjct: 61  RTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKADIGNAGVASVSGSIFSRL 114


>tr|B4FSV9|B4FSV9_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 524

 Score =  162 bits (411), Expect = 8e-39
 Identities = 78/114 (68%), Positives = 96/114 (84%)
 Frame = +1

Query: 190 SVGTPGNSLHGVTGHEPTFSFAVSKDGAGESATPQRFSLPVDSENKAKKIKLWSLAPPHM 369
           +VG PG+SLHGVTG EP F+F+   + A  +    +F LPVDSE+KAK ++L+S+A PHM
Sbjct: 3   AVGAPGSSLHGVTGREPAFAFSTEHEEAASNGG--KFDLPVDSEHKAKSVRLFSVANPHM 60

Query: 370 RTFHLSWISFFTCFVSSFAAAPLLPVIRDNLDLTKKDIGNAGIASVSGSIATRL 531
           RTFHLSWISFFTCFVS+FAAAPL+P+IRDNL+LTK DIGNAG+ASVSGSI +RL
Sbjct: 61  RTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKADIGNAGVASVSGSIFSRL 114


>tr|A6QKV9|A6QKV9_MAIZE Putative high affinity nitrate transporter
           OS=Zea mays GN=nrt2.2 PE=2 SV=1
          Length = 524

 Score =  162 bits (411), Expect = 8e-39
 Identities = 78/114 (68%), Positives = 96/114 (84%)
 Frame = +1

Query: 190 SVGTPGNSLHGVTGHEPTFSFAVSKDGAGESATPQRFSLPVDSENKAKKIKLWSLAPPHM 369
           +VG PG+SLHGVTG EP F+F+   + A  +    +F LPVDSE+KAK ++L+S+A PHM
Sbjct: 3   AVGAPGSSLHGVTGREPAFAFSTEHEEAASNGG--KFDLPVDSEHKAKSVRLFSVANPHM 60

Query: 370 RTFHLSWISFFTCFVSSFAAAPLLPVIRDNLDLTKKDIGNAGIASVSGSIATRL 531
           RTFHLSWISFFTCFVS+FAAAPL+P+IRDNL+LTK DIGNAG+ASVSGSI +RL
Sbjct: 61  RTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKADIGNAGVASVSGSIFSRL 114