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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955508
Clone id TST39A01NGRL0023_E15
Library
Length 506
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_E15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GTTAGTTCTTCTTGTGCTTGAAACACATATGCAGAGGAGGGTTTTGTGCCGGGGTTTTAT
ACAGCAGGCATACATACGTGCTTGAAGGTAGAAAGATTTGAGCCATGGCCCGTGACTGTG
TCACAAGAGTTGTTGCTGGAGTTGCGATGGGAGGTGCTGTTGGTGGTGCAATTGGTGCCG
TCTACGGTACATATGAGGCTGTTAGATACAAGATTCCAGGGATTCTCAAGCTCCGACATG
TGGGACAAACTACCCTTGGAAGTGCTGCTATATTTGGTCTTTTCTTGGGGGCAGGAAGCC
TTATTCATTGTGGTAAAAGTTACTAAATATGTTGTAATGGATTCCGTGACAATGCAATTT
ACCTTTTACATACAAGCCTTTTTTCCATTGAGTGTCTGTTGTTTGAATTAATAGCTTGGC
CTTGCCTCTACAAAGCATAAAATGATTTTGATTTATGCTTGAGCCTTCCATGTCTTGAAG
AGAAAGTACTACACTTCTGAATGAAA
■■Homology search results ■■ -
sp_hit_id P43059
Definition sp|P43059|CAN1_CANAL Lysine/arginine permease OS=Candida albicans
Align length 28
Score (bit) 30.4
E-value 4.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955508|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_E15, 5'
         (506 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P43059|CAN1_CANAL Lysine/arginine permease OS=Candida albican...    30   4.9  
sp|P96704|YDGF_BACSU Uncharacterized transporter ydgF OS=Bacillu...    30   8.4  
sp|Q9X7P0|ANSP_STRCO L-asparagine permease OS=Streptomyces coeli...    30   8.4  
sp|O06005|AAPA_BACSU Amino-acid permease aapA OS=Bacillus subtil...    30   8.4  

>sp|P43059|CAN1_CANAL Lysine/arginine permease OS=Candida albicans
           GN=CAN1 PE=3 SV=1
          Length = 571

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 225 LKLRHVGQTTLGSAAIFGLFLGAGSLIH 308
           LK RHV    +G     GLF+  GSL+H
Sbjct: 64  LKARHVSMIAIGGTIGTGLFISTGSLLH 91


>sp|P96704|YDGF_BACSU Uncharacterized transporter ydgF OS=Bacillus
           subtilis GN=ydgF PE=3 SV=1
          Length = 458

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 225 LKLRHVGQTTLGSAAIFGLFLGAGSLIH 308
           LK RH+    +G A   GLFLG+G  IH
Sbjct: 19  LKNRHIQLIAIGGAIGTGLFLGSGKSIH 46


>sp|Q9X7P0|ANSP_STRCO L-asparagine permease OS=Streptomyces
           coelicolor GN=ansP PE=3 SV=1
          Length = 489

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = +3

Query: 225 LKLRHVGQTTLGSAAIFGLFLGAG 296
           LK RHV    +G A   GLFLGAG
Sbjct: 34  LKARHVNMIAIGGAIGTGLFLGAG 57


>sp|O06005|AAPA_BACSU Amino-acid permease aapA OS=Bacillus subtilis
           GN=aapA PE=3 SV=1
          Length = 459

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 225 LKLRHVGQTTLGSAAIFGLFLGAGSLIH 308
           LK RH+    +G A   GLFLG+G  IH
Sbjct: 20  LKNRHIQLMAIGGAIGTGLFLGSGKSIH 47
tr_hit_id A7PQZ3
Definition tr|A7PQZ3|A7PQZ3_VITVI Chromosome chr6 scaffold_25, whole genome shotgun sequence OS=Vitis vinifera
Align length 74
Score (bit) 90.1
E-value 5.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955508|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_E15, 5'
         (506 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PQZ3|A7PQZ3_VITVI Chromosome chr6 scaffold_25, whole genome...    90   5e-17
tr|Q0IWT1|Q0IWT1_ORYSJ Os10g0489700 protein OS=Oryza sativa subs...    88   2e-16
tr|A9RUH0|A9RUH0_PHYPA Predicted protein OS=Physcomitrella paten...    88   2e-16
tr|A3C5Z4|A3C5Z4_ORYSJ Putative uncharacterized protein OS=Oryza...    88   2e-16
tr|A2Z8T1|A2Z8T1_ORYSI Putative uncharacterized protein OS=Oryza...    88   2e-16
tr|B6UG12|B6UG12_MAIZE Putative uncharacterized protein OS=Zea m...    88   3e-16
tr|A9TQQ9|A9TQQ9_PHYPA Predicted protein OS=Physcomitrella paten...    87   6e-16
tr|B6SKV2|B6SKV2_MAIZE Putative uncharacterized protein OS=Zea m...    86   1e-15
tr|B8LNF0|B8LNF0_PICSI Putative uncharacterized protein OS=Picea...    85   2e-15
tr|A9PBR3|A9PBR3_POPTR Putative uncharacterized protein OS=Popul...    84   3e-15
tr|A9NTW3|A9NTW3_PICSI Putative uncharacterized protein OS=Picea...    84   4e-15
tr|Q9SFC3|Q9SFC3_ARATH F17A17.25 protein (Putative uncharacteriz...    78   2e-13
tr|Q01AI6|Q01AI6_OSTTA Chromosome 04 contig 1, DNA sequence OS=O...    69   1e-10
tr|A4RWF7|A4RWF7_OSTLU Predicted protein OS=Ostreococcus lucimar...    69   1e-10
tr|A8HP75|A8HP75_CHLRE Predicted protein OS=Chlamydomonas reinha...    49   1e-04
tr|B2G578|B2G578_LACRJ Amino acid transport protein OS=Lactobaci...    33   6.0  
tr|A5VHP8|A5VHP8_LACRD Amino acid permease-associated region OS=...    33   6.0  
tr|B3XNF7|B3XNF7_LACRE Amino acid permease-associated region OS=...    33   6.0  
tr|A7RLI1|A7RLI1_NEMVE Predicted protein OS=Nematostella vectens...    33   6.0  
tr|Q5FHX1|Q5FHX1_LACAC Amino acid permease OS=Lactobacillus acid...    33   7.8  
tr|Q5F0F5|Q5F0F5_9EUCA NADH-ubiquinone oxidoreductase chain 6 OS...    33   7.8  
tr|B3S3B8|B3S3B8_TRIAD Putative uncharacterized protein OS=Trich...    33   7.8  

>tr|A7PQZ3|A7PQZ3_VITVI Chromosome chr6 scaffold_25, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00022253001
           PE=4 SV=1
          Length = 74

 Score = 90.1 bits (222), Expect = 5e-17
 Identities = 44/74 (59%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
 Frame = +3

Query: 105 MARD-CVTRXXXXXXXXXXXXXXXXXXXXTYEAVRYKIPGILKLRHVGQTTLGSAAIFGL 281
           MARD C+ R                    TYEA+RYK+PG+LK+R++GQTTLGSAA+FGL
Sbjct: 1   MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRYKVPGLLKIRYIGQTTLGSAAVFGL 60

Query: 282 FLGAGSLIHCGKSY 323
           FLGAGSLIHCGKSY
Sbjct: 61  FLGAGSLIHCGKSY 74


>tr|Q0IWT1|Q0IWT1_ORYSJ Os10g0489700 protein OS=Oryza sativa subsp.
           japonica GN=Os10g0489700 PE=4 SV=1
          Length = 85

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 38/45 (84%), Positives = 45/45 (100%)
 Frame = +3

Query: 189 TYEAVRYKIPGILKLRHVGQTTLGSAAIFGLFLGAGSLIHCGKSY 323
           TYEA+RYK+PG+LK+R++GQTT+GSAAIFGLFLGAGSLIHCGKSY
Sbjct: 41  TYEAIRYKVPGLLKIRYIGQTTVGSAAIFGLFLGAGSLIHCGKSY 85


>tr|A9RUH0|A9RUH0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_205714 PE=4 SV=1
          Length = 74

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 42/70 (60%), Positives = 49/70 (70%)
 Frame = +3

Query: 114 DCVTRXXXXXXXXXXXXXXXXXXXXTYEAVRYKIPGILKLRHVGQTTLGSAAIFGLFLGA 293
           DC+TR                    TYEA+RY+IPG+LK+RHVGQTTLGSAA+FGLFLGA
Sbjct: 5   DCLTRVVAGVGIGGAVGGAFGAVYGTYEAIRYRIPGMLKVRHVGQTTLGSAAVFGLFLGA 64

Query: 294 GSLIHCGKSY 323
           GSLI CGK+Y
Sbjct: 65  GSLIQCGKNY 74


>tr|A3C5Z4|A3C5Z4_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_030716 PE=4 SV=1
          Length = 75

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 38/45 (84%), Positives = 45/45 (100%)
 Frame = +3

Query: 189 TYEAVRYKIPGILKLRHVGQTTLGSAAIFGLFLGAGSLIHCGKSY 323
           TYEA+RYK+PG+LK+R++GQTT+GSAAIFGLFLGAGSLIHCGKSY
Sbjct: 31  TYEAIRYKVPGLLKIRYIGQTTVGSAAIFGLFLGAGSLIHCGKSY 75


>tr|A2Z8T1|A2Z8T1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_34124 PE=4 SV=1
          Length = 75

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 38/45 (84%), Positives = 45/45 (100%)
 Frame = +3

Query: 189 TYEAVRYKIPGILKLRHVGQTTLGSAAIFGLFLGAGSLIHCGKSY 323
           TYEA+RYK+PG+LK+R++GQTT+GSAAIFGLFLGAGSLIHCGKSY
Sbjct: 31  TYEAIRYKVPGLLKIRYIGQTTVGSAAIFGLFLGAGSLIHCGKSY 75


>tr|B6UG12|B6UG12_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 75

 Score = 87.8 bits (216), Expect = 3e-16
 Identities = 39/45 (86%), Positives = 44/45 (97%)
 Frame = +3

Query: 189 TYEAVRYKIPGILKLRHVGQTTLGSAAIFGLFLGAGSLIHCGKSY 323
           T+EA RYKIPG+LK+RH+GQTT+GSAAIFGLFLGAGSLIHCGKSY
Sbjct: 31  TFEAFRYKIPGLLKIRHIGQTTVGSAAIFGLFLGAGSLIHCGKSY 75


>tr|A9TQQ9|A9TQQ9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_224512 PE=4 SV=1
          Length = 74

 Score = 86.7 bits (213), Expect = 6e-16
 Identities = 42/70 (60%), Positives = 48/70 (68%)
 Frame = +3

Query: 114 DCVTRXXXXXXXXXXXXXXXXXXXXTYEAVRYKIPGILKLRHVGQTTLGSAAIFGLFLGA 293
           DC+TR                    TYEA RY+IPG+LK+RHVGQTTLGSAA+FGLFLGA
Sbjct: 5   DCLTRVVAGVGIGGAVGGAFGAVFGTYEAFRYRIPGMLKVRHVGQTTLGSAAVFGLFLGA 64

Query: 294 GSLIHCGKSY 323
           GSLI CGK+Y
Sbjct: 65  GSLIQCGKNY 74


>tr|B6SKV2|B6SKV2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 75

 Score = 85.5 bits (210), Expect = 1e-15
 Identities = 38/45 (84%), Positives = 44/45 (97%)
 Frame = +3

Query: 189 TYEAVRYKIPGILKLRHVGQTTLGSAAIFGLFLGAGSLIHCGKSY 323
           T+EA RYKIPG+LK+R++GQTT+GSAAIFGLFLGAGSLIHCGKSY
Sbjct: 31  TFEAFRYKIPGLLKIRYIGQTTVGSAAIFGLFLGAGSLIHCGKSY 75


>tr|B8LNF0|B8LNF0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 74

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 44/74 (59%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = +3

Query: 105 MARD-CVTRXXXXXXXXXXXXXXXXXXXXTYEAVRYKIPGILKLRHVGQTTLGSAAIFGL 281
           MARD C+ R                    T+EA +YKIPG +K+R+VGQTTLGSAAIFGL
Sbjct: 1   MARDSCLARVGTGIAVGGAVGGAIGAVYGTFEAFKYKIPGAMKIRYVGQTTLGSAAIFGL 60

Query: 282 FLGAGSLIHCGKSY 323
           FLGAGSLIHCGKSY
Sbjct: 61  FLGAGSLIHCGKSY 74


>tr|A9PBR3|A9PBR3_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 74

 Score = 84.3 bits (207), Expect = 3e-15
 Identities = 42/74 (56%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
 Frame = +3

Query: 105 MARD-CVTRXXXXXXXXXXXXXXXXXXXXTYEAVRYKIPGILKLRHVGQTTLGSAAIFGL 281
           MARD C+ R                    TYEA+R ++PG+LK+R++GQTT+GSAAIFGL
Sbjct: 1   MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRNRVPGLLKVRYIGQTTVGSAAIFGL 60

Query: 282 FLGAGSLIHCGKSY 323
           FLGAGSLIHCGKSY
Sbjct: 61  FLGAGSLIHCGKSY 74