DK955511
Clone id TST39A01NGRL0023_E18
Library
Length 440
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_E18. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GACAGAAGGTTGGAATGCGCCTGAATGTGAAATCAAACATGTAATTTGATCTTGGGCCTC
AGATGTGTTCCGAGTGTTAGTTGTAGCAGGATGATCTTGGAGATGCAATATATTGAGGTG
AAGTCATAGATTATGTACATCCTATGATTAGCGCCTTGGGCTTCTTGTCTCAATGAATGA
CATGATAGAAGGGTTTTTGTATTTAAGCGAGTGGTCACAAAATGGGACTGTAAGCTTACC
TGCTCTCTCTCTCTCTCTCTCTGCAGCTTGTTTGGTCTATGTGCCTATCCATCATCATGA
AGCATTATCACCCTCTCTGTGTGCAGCTTGTTTGGTCTATGTATTATGAGATGACATGGT
ATTTCACTGAGAAGTAGGGACATTTCTGCATGGCTAAAAAAAAAAAAAAAAAAAAACCCA
ACTTTCTTGTACAAAAGTTG
■■Homology search results ■■ -
sp_hit_id Q9WTK2
Definition sp|Q9WTK2|CDYL_MOUSE Chromodomain Y-like protein OS=Mus musculus
Align length 59
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955511|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_E18, 5'
(395 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9WTK2|CDYL_MOUSE Chromodomain Y-like protein OS=Mus musculus... 30 4.9

>sp|Q9WTK2|CDYL_MOUSE Chromodomain Y-like protein OS=Mus musculus
GN=Cdyl PE=1 SV=1
Length = 593

Score = 29.6 bits (65), Expect = 4.9
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -1

Query: 362 IPCHLIIHRPNKLHTERVIMLHDDG*AHRPNKLQREREREQVSLQSHFVTTRLNTKTLL 186
+ C IH N+ H ER +G R ++ R+Q+S +H ++ N+K L+
Sbjct: 95 VNCEEYIHDFNRRHNER----QKEGSLARASRASPSNARKQISRSTHSTLSKTNSKALV 149


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955511|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_E18, 5'
(395 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******