DK955519 |
Clone id |
TST39A01NGRL0023_F02 |
Library |
TST39 |
Length |
611 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_F02. 5' end sequence. |
Accession |
DK955519 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL624Contig1 |
Sequence |
ATCCAGATACTTTTGAAGCTTGCATGGAGGCAATGGCGTCCTCGTTAAAGCCGCCTGCCT GCTCGTTTGTGAAGGTTACTCGAAGATTAGAAAGCAGACAGAGCAAGCTCTATGCAAAAT CATTATGGCATCAGCCTTTTGGTCTTCAGTCAAGGCCAAGCAGGATATGTTTACAGGTCG ATTGCTCCGCAAGGGGCCTCGAAGAGGTGAAGCCACTTCAAGCTCCAAAGTTGCAGGACA AATTTGGCTCAGAGAATCTGCAATTTTCGGATGTTGCTGGTAGGACTGTGGCAGAGCTCA AACTGGCATCAGGTACCTCAGTACGCCTACTATTGGCAGAGGCACGGATCACATCTTACA GCTGCCGCCTTTGGCATGGTAGCTGCGAAGAAATGTTGTATACTGATGTGTCAGAAAGCT CCGTCAACGGCATTGATAGAAGTGTACATGGGGCTACTCCTCAGCAGTTTTTTGTAACTG GTGGCATGGCTCCCTCTTTAGCTCACTCTCTTGATCCTCACATTAGCCTTTGCAATAACA ATTGGTCAGTACAGTCGGTGGCAGTCGATCCAAAGGAGCACGTTCAGGGTTTGCGAAGGT CCTTACTCTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A7MV92 |
Definition |
sp|A7MV92|Y1411_VIBHB UPF0061 protein VIBHAR_01411 OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) |
Align length |
103 |
Score (bit) |
33.1 |
E-value |
1.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9C503 |
Definition |
tr|Q9C503|Q9C503_ARATH Putative uncharacterized protein F7A10.12 (Putative uncharacterized protein T18I3.2) OS=Arabidopsis thaliana |
Align length |
131 |
Score (bit) |
62.4 |
E-value |
2.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955519|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_F02, 5' (611 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9C503|Q9C503_ARATH Putative uncharacterized protein F7A10.12... 62 2e-08 tr|Q3ECP4|Q3ECP4_ARATH Uncharacterized protein At1g55370.1 (Puta... 62 2e-08 tr|Q8LBH1|Q8LBH1_ARATH Putative uncharacterized protein OS=Arabi... 62 3e-08 tr|A7PW58|A7PW58_VITVI Chromosome chr8 scaffold_34, whole genome... 54 7e-06 tr|A5AUH5|A5AUH5_VITVI Putative uncharacterized protein OS=Vitis... 54 7e-06 tr|Q9XIR6|Q9XIR6_ARATH F13O11.8 protein OS=Arabidopsis thaliana ... 50 1e-04 tr|Q94AQ8|Q94AQ8_ARATH Putative uncharacterized protein At1g6477... 50 1e-04 tr|Q8W307|Q8W307_ORYSA Putative antifreeze glycoprotein OS=Oryza... 45 0.003 tr|Q10CW2|Q10CW2_ORYSJ Os03g0748300 protein OS=Oryza sativa subs... 45 0.003 tr|A3AEA6|A3AEA6_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.003 tr|A2XM00|A2XM00_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.003 tr|A9SKF3|A9SKF3_PHYPA Predicted protein OS=Physcomitrella paten... 44 0.007 tr|Q8H8C2|Q8H8C2_ORYSJ Putative uncharacterized protein OJ1134F0... 44 0.010 tr|Q10RI6|Q10RI6_ORYSJ Os03g0158300 protein OS=Oryza sativa subs... 44 0.010 tr|B8ANU6|B8ANU6_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.010 tr|A2Q5N9|A2Q5N9_MEDTR Galactose mutarotase-like OS=Medicago tru... 44 0.010 tr|B4FJP7|B4FJP7_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.021 tr|B4FWG2|B4FWG2_MAIZE Putative uncharacterized protein OS=Zea m... 41 0.062 tr|B6U6C8|B6U6C8_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.14 tr|A7PW57|A7PW57_VITVI Chromosome chr8 scaffold_34, whole genome... 37 1.2 tr|A7SEF8|A7SEF8_NEMVE Predicted protein OS=Nematostella vectens... 35 3.4 tr|Q7XIK0|Q7XIK0_ORYSJ Putative peptidyl-prolycis-trans isomeras... 34 5.8 tr|Q7XIJ9|Q7XIJ9_ORYSJ Os07g0565600 protein OS=Oryza sativa subs... 34 5.8 tr|B8B7H0|B8B7H0_ORYSI Putative uncharacterized protein OS=Oryza... 34 5.8 tr|Q2H5Q6|Q2H5Q6_CHAGB Putative uncharacterized protein OS=Chaet... 34 7.6 tr|Q93GL4|Q93GL4_SALTY Conjugative transfer: oriT nicking-unwind... 33 10.0 tr|O66931|O66931_AQUAE Putative uncharacterized protein OS=Aquif... 33 10.0 tr|B5N6B1|B5N6B1_SALET Type IV secretion-like conjugative transf... 33 10.0
>tr|Q9C503|Q9C503_ARATH Putative uncharacterized protein F7A10.12 (Putative uncharacterized protein T18I3.2) OS=Arabidopsis thaliana GN=T18I3.2 PE=4 SV=1 Length = 354
Score = 62.4 bits (150), Expect = 2e-08 Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 1/131 (0%) Frame = +3
Query: 213 PLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCRLWHGSCEE 392 P+ L+ +F F D+ +A LKL +G+S ++L ITSY R+WHG E Sbjct: 59 PIDVEYLRREFSGHGATFEDIGETCIARLKLDNGSSANVMLTRGMITSYKVRVWHGGKVE 118
Query: 393 MLYTDVSESSVNGIDRSVHGATPQQFFVTGGMAPSLAHSLDPHISLCNNNWSVQSVAVDP 572 +L+T V + ++ + GG++ + S IS +W +Q ++ D Sbjct: 119 LLHTWVEQEE-------------EEVVIRGGVSSAFRSSDSDEIS----DWRLQGISGDS 161
Query: 573 KEHVQ-GLRRS 602 K+ VQ LRRS Sbjct: 162 KDCVQMELRRS 172
>tr|Q3ECP4|Q3ECP4_ARATH Uncharacterized protein At1g55370.1 (Putative uncharacterized protein At1g55370) OS=Arabidopsis thaliana GN=At1g55370 PE=2 SV=1 Length = 308
Score = 62.4 bits (150), Expect = 2e-08 Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 1/131 (0%) Frame = +3
Query: 213 PLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCRLWHGSCEE 392 P+ L+ +F F D+ +A LKL +G+S ++L ITSY R+WHG E Sbjct: 59 PIDVEYLRREFSGHGATFEDIGETCIARLKLDNGSSANVMLTRGMITSYKVRVWHGGKVE 118
Query: 393 MLYTDVSESSVNGIDRSVHGATPQQFFVTGGMAPSLAHSLDPHISLCNNNWSVQSVAVDP 572 +L+T V + ++ + GG++ + S IS +W +Q ++ D Sbjct: 119 LLHTWVEQEE-------------EEVVIRGGVSSAFRSSDSDEIS----DWRLQGISGDS 161
Query: 573 KEHVQ-GLRRS 602 K+ VQ LRRS Sbjct: 162 KDCVQMELRRS 172
>tr|Q8LBH1|Q8LBH1_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 354
Score = 62.0 bits (149), Expect = 3e-08 Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 1/131 (0%) Frame = +3
Query: 213 PLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCRLWHGSCEE 392 P+ L+ +F F D+ +A LKL G+S ++L ITSY R+WHG E Sbjct: 59 PIDVEYLRREFSGHGATFEDIGETCIARLKLDDGSSANVMLTRGMITSYKVRVWHGGKVE 118
Query: 393 MLYTDVSESSVNGIDRSVHGATPQQFFVTGGMAPSLAHSLDPHISLCNNNWSVQSVAVDP 572 +L+T V + ++ + GG++ + S IS +W +Q ++ D Sbjct: 119 LLHTWVEQEE-------------EEVVIRGGVSSAFRSSDSDEIS----DWRLQGISGDS 161
Query: 573 KEHVQ-GLRRS 602 K+ VQ LRRS Sbjct: 162 KDCVQMELRRS 172
>tr|A7PW58|A7PW58_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025482001 PE=4 SV=1 Length = 349
Score = 53.9 bits (128), Expect = 7e-06 Identities = 32/125 (25%), Positives = 56/125 (44%) Frame = +3
Query: 213 PLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCRLWHGSCEE 392 P L+ +F + F + V ++ L +G+ L+L ITSY +WHG E Sbjct: 51 PANVDYLETQFSGHGVTFEGIGDSYVVKMGLENGSLASLMLPSGLITSYKAPMWHGGTLE 110
Query: 393 MLYTDVSESSVNGIDRSVHGATPQQFFVTGGMAPSLAHSLDPHISLCNNNWSVQSVAVDP 572 +L+T V+E + + GG++ +L D IS ++W +Q V + Sbjct: 111 VLHTTVTEEDSGAV-------------IQGGVSLALECESDGGISWSPSSWILQDVRGNA 157
Query: 573 KEHVQ 587 +E +Q Sbjct: 158 EELIQ 162
>tr|A5AUH5|A5AUH5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016184 PE=4 SV=1 Length = 754
Score = 53.9 bits (128), Expect = 7e-06 Identities = 32/125 (25%), Positives = 56/125 (44%) Frame = +3
Query: 213 PLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCRLWHGSCEE 392 P L+ +F + F + V ++ L +G+ L+L ITSY +WHG E Sbjct: 421 PANVDYLETQFSGHGVTFEGIGDSYVVKMGLENGSLASLMLPSGLITSYKAPMWHGGTLE 480
Query: 393 MLYTDVSESSVNGIDRSVHGATPQQFFVTGGMAPSLAHSLDPHISLCNNNWSVQSVAVDP 572 +L+T V+E + + GG++ +L D IS ++W +Q V + Sbjct: 481 VLHTTVTEEDSGAV-------------IQGGVSLALECESDGGISWSPSSWILQDVRGNA 527
Query: 573 KEHVQ 587 +E +Q Sbjct: 528 EELIQ 532
Score = 36.6 bits (83), Expect = 1.2 Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 2/60 (3%) Frame = +3
Query: 231 LQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCRL-W-HGSCEEMLYT 404 L KFG + ++F + + EL + +G+S+RL + + +TSY ++ W EE+LYT Sbjct: 84 LDQKFGRKGIKFLESGNVPLVELTVRNGSSLRLRIPDGLVTSYKPKVNWKDDGFEEVLYT 143
>tr|Q9XIR6|Q9XIR6_ARATH F13O11.8 protein OS=Arabidopsis thaliana GN=F13O11.8 PE=4 SV=1 Length = 338
Score = 49.7 bits (117), Expect = 1e-04 Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 2/79 (2%) Frame = +3
Query: 204 EVKPLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCRLW--H 377 + + + KL+DKFG + ++FS+ + ELK+ +G+S++L L++A + SY +++ Sbjct: 24 QTQTINTEKLEDKFGRKGIKFSESNNIPMVELKVRNGSSLKLSLSDAHVLSYKPKVYWKD 83
Query: 378 GSCEEMLYTDVSESSVNGI 434 EE+LYT + S G+ Sbjct: 84 EGFEEVLYTVDGDESRGGV 102
>tr|Q94AQ8|Q94AQ8_ARATH Putative uncharacterized protein At1g64770 (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At1g64770 PE=2 SV=1 Length = 348
Score = 49.7 bits (117), Expect = 1e-04 Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 2/79 (2%) Frame = +3
Query: 204 EVKPLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCRLW--H 377 + + + KL+DKFG + ++FS+ + ELK+ +G+S++L L++A + SY +++ Sbjct: 24 QTQTINTEKLEDKFGRKGIKFSESNNIPMVELKVRNGSSLKLSLSDAHVLSYKPKVYWKD 83
Query: 378 GSCEEMLYTDVSESSVNGI 434 EE+LYT + S G+ Sbjct: 84 EGFEEVLYTVDGDESRGGV 102
>tr|Q8W307|Q8W307_ORYSA Putative antifreeze glycoprotein OS=Oryza sativa GN=OSJNBa0069E14.14 PE=4 SV=1 Length = 411
Score = 45.1 bits (105), Expect = 0.003 Identities = 20/68 (29%), Positives = 36/68 (52%) Frame = +3
Query: 213 PLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCRLWHGSCEE 392 P L +F + F V G +++L +G++ +LL +TSY +WHG+ E Sbjct: 75 PPNVDYLAAEFAGHGVSFEAVGGSCAVKMELRNGSAAHVLLPGGLVTSYKPAMWHGAPTE 134
Query: 393 MLYTDVSE 416 +++T V+E Sbjct: 135 VIHTTVAE 142
>tr|Q10CW2|Q10CW2_ORYSJ Os03g0748300 protein OS=Oryza sativa subsp. japonica GN=Os03g0748300 PE=2 SV=1 Length = 411
Score = 45.1 bits (105), Expect = 0.003 Identities = 20/68 (29%), Positives = 36/68 (52%) Frame = +3
Query: 213 PLQAPKLQDKFGSENLQFSDVAGRTVAELKLASGTSVRLLLAEARITSYSCRLWHGSCEE 392 P L +F + F V G +++L +G++ +LL +TSY +WHG+ E Sbjct: 75 PPNVDYLAAEFAGHGVSFEAVGGSCAVKMELRNGSAAHVLLPGGLVTSYKPAMWHGAPTE 134
Query: 393 MLYTDVSE 416 +++T V+E Sbjct: 135 VIHTTVAE 142
>tr|A3AEA6|A3AEA6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009128 PE=4 SV=1 Length = 399
Score = 45.1 bits (105), Expect = 0.003 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 4/155 (2%) Frame = +3
Query: 135 PFGLQSRPSRICLQVDCSARGLEEVKPLQAPKLQDKFGSENLQFS--DVAGRTVAELKLA 308 P L +RPS + + +A KP L++ FG + L+F+ G AEL + Sbjct: 8 PLHLPTRPSAV--KASAAATAAAAPKP---QSLEESFGRKGLRFAADPATGAPTAELSVR 62
Query: 309 SGTSVRLLLAEARITSYSCRLW--HGSCEEMLYTDVSESSVNGIDRSVHGATPQQFFVTG 482 +G+S++L LA+ +TSY +++ C E+L+T + + V A + + Sbjct: 63 NGSSLQLRLADGLVTSYRPKVYWKDDGCREVLHTVAGAGAGGEVKGGVGLALSE--VSSS 120
Query: 483 GMAPSLAHSLDPHISLCNNNWSVQSVAVDPKEHVQ 587 G A SL L + WSV D + VQ Sbjct: 121 GAAESL---------LVGSEWSVVDADSDSYDAVQ 146
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