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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955523
Clone id TST39A01NGRL0023_F06
Library
Length 625
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_F06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GAACTCCTCCTCTGTTAAAGTTGCCATTTATTTTTCTGTGCACCTTATCAAAACTAAATT
TCACAAATTCTCGCCATGGTATCCTTCACCAGCACCAGAGAACAGCATCCCTTCTTCTGC
ACTTTCCCGTCATTGGAGGCATCCTCTTCCTTACCGTCTCCATCTTCATCTTGTGTGCTT
CCATCGCCTCCGCCTTCTGTTCCTTCAACTGCATCGCCTACATTTTCATGTCCATCCGGC
ATCTCCAATAATGCATGCCTTGTTCAGAAACAGAGACAGATGCGCCACCTTGTTGCAGAG
AGGCTACCCTTGCCAGAACTGCCATTTGCTTCCTTCGTCCAATCGGATCTCAGCAAACAT
TTCAAGGGAAGGGATGCCATTATGCGTCCTGTTTCCATAGCCGAATTTGGCTTCAAATCC
CTATTTTCGCAAACTTTAGAGGAAAGCATCGAAGGTGAAGAAGAAGAAGAAGGAGACCGC
AAAGTGAAAAAGAGACAGAAGAGCAAGAGGAATCACAGGCCTCTGCGGTTTAAGGTTGGA
AACGCATCTGCCAAGCGATTACTTAGTGGTGCATTTGCAGGTGCAGTTTCAAGGACTGCA
GTTGCTCCTTTGGAGACCATTCGGA
■■Homology search results ■■ -
sp_hit_id P29518
Definition sp|P29518|BT1_MAIZE Protein brittle-1, chloroplastic/amyloplastic OS=Zea mays
Align length 23
Score (bit) 40.0
E-value 0.01
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955523|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_F06, 5'
         (625 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P29518|BT1_MAIZE Protein brittle-1, chloroplastic/amyloplasti...    40   0.010
sp|Q0P483|S2542_DANRE Solute carrier family 25 member 42 OS=Dani...    39   0.028
sp|Q8R0Y8|S2542_MOUSE Solute carrier family 25 member 42 OS=Mus ...    34   0.54 
sp|Q86VD7|S2542_HUMAN Solute carrier family 25 member 42 OS=Homo...    34   0.54 
sp|Q8BVN7|S2541_MOUSE Solute carrier family 25 member 41 OS=Mus ...    34   0.70 
sp|P31692|ADT_CHLKE ADP,ATP carrier protein OS=Chlorella kessler...    34   0.70 
sp|Q3V132|ADT4_MOUSE ADP/ATP translocase 4 OS=Mus musculus GN=Sl...    34   0.70 
sp|Q6GQS1|SCMC3_MOUSE Calcium-binding mitochondrial carrier prot...    33   1.6  
sp|Q9BV35|SCMC3_HUMAN Calcium-binding mitochondrial carrier prot...    33   1.6  
sp|Q5XHA0|SCMC1_XENTR Calcium-binding mitochondrial carrier prot...    33   1.6  
sp|P0C546|S2542_RAT Solute carrier family 25 member 42 OS=Rattus...    33   1.6  
sp|Q8N5S1|S2541_HUMAN Solute carrier family 25 member 41 OS=Homo...    33   1.6  
sp|Q0II44|S2541_BOVIN Solute carrier family 25 member 41 OS=Bos ...    33   1.6  
sp|O95622|ADCY5_HUMAN Adenylate cyclase type 5 OS=Homo sapiens G...    32   2.0  
sp|Q7ZY36|SCM1A_XENLA Calcium-binding mitochondrial carrier prot...    32   2.0  
sp|B0Z587|YCF2_OENGL Protein ycf2 OS=Oenothera glazioviana GN=yc...    32   2.6  
sp|O18757|SCMC1_RABIT Calcium-binding mitochondrial carrier prot...    32   2.7  
sp|Q6NUK1|SCMC1_HUMAN Calcium-binding mitochondrial carrier prot...    32   2.7  
sp|Q7T0U6|SCM1B_XENLA Calcium-binding mitochondrial carrier prot...    32   2.7  
sp|Q05AQ3|S2542_XENTR Solute carrier family 25 member 42 OS=Xeno...    32   2.7  
sp|Q8BMD8|SCMC1_MOUSE Calcium-binding mitochondrial carrier prot...    32   3.5  
sp|A5PJZ1|SCMC1_BOVIN Calcium-binding mitochondrial carrier prot...    32   3.5  
sp|Q19529|CMC3_CAEEL Probable calcium-binding mitochondrial carr...    32   3.5  
sp|Q4R8M0|ADT4_MACFA ADP/ATP translocase 4 OS=Macaca fasciculari...    32   3.5  
sp|Q9H0C2|ADT4_HUMAN ADP/ATP translocase 4 OS=Homo sapiens GN=SL...    32   3.5  
sp|Q6QRN9|ADT3_PIG ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A...    32   3.5  
sp|P12236|ADT3_HUMAN ADP/ATP translocase 3 OS=Homo sapiens GN=SL...    32   3.5  
sp|P32007|ADT3_BOVIN ADP/ATP translocase 3 OS=Bos taurus GN=SLC2...    32   3.5  
sp|P06302|PTMA_RAT Prothymosin alpha OS=Rattus norvegicus GN=Ptm...    31   4.5  
sp|Q5R790|PTMA_PONAB Prothymosin alpha OS=Pongo abelii GN=PTMA P...    31   4.5  

>sp|P29518|BT1_MAIZE Protein brittle-1, chloroplastic/amyloplastic
           OS=Zea mays GN=BT1 PE=2 SV=1
          Length = 436

 Score = 40.0 bits (92), Expect = 0.010
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = +1

Query: 556 RLLSGAFAGAVSRTAVAPLETIR 624
           RL+SGA AGAVSRT VAPLETIR
Sbjct: 137 RLVSGAIAGAVSRTFVAPLETIR 159


>sp|Q0P483|S2542_DANRE Solute carrier family 25 member 42 OS=Danio
           rerio GN=slc25a42 PE=2 SV=1
          Length = 321

 Score = 38.5 bits (88), Expect = 0.028
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = +1

Query: 529 FKVGNASAKRLLSGAFAGAVSRTAVAPLE 615
           FK G +    L+SGAFAGAV++TAVAPL+
Sbjct: 29  FKQGRSVLNSLVSGAFAGAVAKTAVAPLD 57


>sp|Q8R0Y8|S2542_MOUSE Solute carrier family 25 member 42 OS=Mus
           musculus GN=Slc25a42 PE=2 SV=1
          Length = 318

 Score = 34.3 bits (77), Expect = 0.54
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = +1

Query: 502 SKRNHRPLRFKVGNASAKRLLSGAFAGAVSRTAVAPLE 615
           SKR+HR +           LLSGA AGA+++TAVAPL+
Sbjct: 26  SKRDHRQV--------LSSLLSGALAGALAKTAVAPLD 55


>sp|Q86VD7|S2542_HUMAN Solute carrier family 25 member 42 OS=Homo
           sapiens GN=SLC25A42 PE=1 SV=2
          Length = 318

 Score = 34.3 bits (77), Expect = 0.54
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = +1

Query: 502 SKRNHRPLRFKVGNASAKRLLSGAFAGAVSRTAVAPLE 615
           SKR+HR +           LLSGA AGA+++TAVAPL+
Sbjct: 26  SKRDHRQV--------LSSLLSGALAGALAKTAVAPLD 55


>sp|Q8BVN7|S2541_MOUSE Solute carrier family 25 member 41 OS=Mus
           musculus GN=Slc25a41 PE=2 SV=1
          Length = 312

 Score = 33.9 bits (76), Expect = 0.70
 Identities = 17/24 (70%), Positives = 18/24 (75%)
 Frame = +1

Query: 553 KRLLSGAFAGAVSRTAVAPLETIR 624
           K LLSGA AGAVSRT  APL+  R
Sbjct: 31  KFLLSGAMAGAVSRTGTAPLDRAR 54


>sp|P31692|ADT_CHLKE ADP,ATP carrier protein OS=Chlorella kessleri
           PE=3 SV=1
          Length = 339

 Score = 33.9 bits (76), Expect = 0.70
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = +1

Query: 544 ASAKRLLSGAFAGAVSRTAVAPLETIR 624
           A  K LL+G  AGA+S+TAVAP+E ++
Sbjct: 40  AFVKDLLAGGTAGAISKTAVAPIERVK 66


>sp|Q3V132|ADT4_MOUSE ADP/ATP translocase 4 OS=Mus musculus
           GN=Slc25a31 PE=2 SV=1
          Length = 320

 Score = 33.9 bits (76), Expect = 0.70
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = +1

Query: 487 KKRQKSKRNHRPLRFKVGNASAKRLLSGAFAGAVSRTAVAPLETIR 624
           KK+   K    P+ F      +K LL+G  A AVS+TAVAP+E ++
Sbjct: 7   KKQSSKKALFDPVSF------SKDLLAGGVAAAVSKTAVAPIERVK 46


>sp|Q6GQS1|SCMC3_MOUSE Calcium-binding mitochondrial carrier protein
           SCaMC-3 OS=Mus musculus GN=Slc25a23 PE=2 SV=1
          Length = 467

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = +1

Query: 553 KRLLSGAFAGAVSRTAVAPLETIR 624
           K+L++GA AGAVSRT  APL+ ++
Sbjct: 186 KQLVAGAVAGAVSRTGTAPLDRLK 209


>sp|Q9BV35|SCMC3_HUMAN Calcium-binding mitochondrial carrier protein
           SCaMC-3 OS=Homo sapiens GN=SLC25A23 PE=1 SV=2
          Length = 468

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = +1

Query: 553 KRLLSGAFAGAVSRTAVAPLETIR 624
           K+L++GA AGAVSRT  APL+ ++
Sbjct: 187 KQLVAGAVAGAVSRTGTAPLDRLK 210


>sp|Q5XHA0|SCMC1_XENTR Calcium-binding mitochondrial carrier protein
           SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1
          Length = 473

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = +1

Query: 553 KRLLSGAFAGAVSRTAVAPLETIR 624
           K+LL+G  AGAVSRT  APL+ ++
Sbjct: 196 KQLLAGGMAGAVSRTGTAPLDRLK 219
tr_hit_id A5APG4
Definition tr|A5APG4|A5APG4_VITVI Putative uncharacterized protein (Chromosome chr11 scaffold_13, whole genome shotgun sequence) OS=Vitis vinifera
Align length 47
Score (bit) 62.8
E-value 2.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955523|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_F06, 5'
         (625 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5APG4|A5APG4_VITVI Putative uncharacterized protein (Chromos...    63   2e-08
tr|A9SAY1|A9SAY1_PHYPA Predicted protein (Fragment) OS=Physcomit...    61   6e-08
tr|A9T229|A9T229_PHYPA Predicted protein (Fragment) OS=Physcomit...    60   1e-07
tr|Q6E5A5|Q6E5A5_HORVD Plastidial ADP-glucose transporter OS=Hor...    57   7e-07
tr|B6TVG6|B6TVG6_MAIZE Protein brittle-1 OS=Zea mays PE=2 SV=1         57   7e-07
tr|B4FQD1|B4FQD1_MAIZE Putative uncharacterized protein OS=Zea m...    57   7e-07
tr|B2LWG5|B2LWG5_MAIZE Nucleotide sugar translocator BT2A OS=Zea...    57   7e-07
tr|Q9SUV1|Q9SUV1_ARATH Adenylate translocator (Brittle-1)-like p...    57   9e-07
tr|Q65XR7|Q65XR7_ORYSJ Os05g0171300 protein OS=Oryza sativa subs...    57   1e-06
tr|A3B0F2|A3B0F2_ORYSJ Putative uncharacterized protein OS=Oryza...    57   1e-06
tr|A2Y0V2|A2Y0V2_ORYSI Putative uncharacterized protein OS=Oryza...    57   1e-06
tr|A9RQK6|A9RQK6_PHYPA Predicted protein OS=Physcomitrella paten...    56   2e-06
tr|Q38M74|Q38M74_SOLTU Brittle 1 protein-like OS=Solanum tuberos...    55   3e-06
tr|B2LWG6|B2LWG6_MAIZE Protein brittle-1 OS=Zea mays GN=BT2B PE=...    54   6e-06
tr|Q69XJ8|Q69XJ8_ORYSJ Os06g0602700 protein OS=Oryza sativa subs...    54   8e-06
tr|A2YER7|A2YER7_ORYSI Putative uncharacterized protein OS=Oryza...    54   8e-06
tr|Q9ZNY4|Q9ZNY4_SOLTU Mitochondrial energy transfer protein OS=...    53   2e-05
tr|A7P5R3|A7P5R3_VITVI Chromosome chr4 scaffold_6, whole genome ...    52   3e-05
tr|A5AV90|A5AV90_VITVI Putative uncharacterized protein OS=Vitis...    52   3e-05
tr|Q6Z782|Q6Z782_ORYSJ Os02g0202400 protein OS=Oryza sativa subs...    51   5e-05
tr|A3A4A0|A3A4A0_ORYSJ Putative uncharacterized protein OS=Oryza...    51   5e-05
tr|A2X256|A2X256_ORYSI Putative uncharacterized protein OS=Oryza...    51   5e-05
tr|B4F832|B4F832_MAIZE Putative uncharacterized protein OS=Zea m...    50   8e-05
tr|A9SRD8|A9SRD8_PHYPA Predicted protein OS=Physcomitrella paten...    50   8e-05
tr|A8NWL7|A8NWL7_COPC7 Predicted protein OS=Coprinopsis cinerea ...    42   0.023
tr|B5WH09|B5WH09_9BURK Putative uncharacterized protein OS=Burkh...    40   0.086
tr|A2Z2U9|A2Z2U9_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.33 
tr|A0SEJ0|A0SEJ0_PLAVI Merozoite surface protein 5 (Fragment) OS...    39   0.33 
tr|Q20AK0|Q20AK0_ICTPU Adenine nucleotide translocator s6 (Fragm...    39   0.33 
tr|Q8W008|Q8W008_HORVU Brittle-1-like protein OS=Hordeum vulgare...    39   0.33 

>tr|A5APG4|A5APG4_VITVI Putative uncharacterized protein (Chromosome
           chr11 scaffold_13, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00016874001 PE=3 SV=1
          Length = 400

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 31/47 (65%), Positives = 37/47 (78%)
 Frame = +1

Query: 484 VKKRQKSKRNHRPLRFKVGNASAKRLLSGAFAGAVSRTAVAPLETIR 624
           VKK++K KR    L+ K+GN S +RL+SGA AG VSRTAVAPLETIR
Sbjct: 98  VKKKKKKKRGAVKLKIKIGNPSLRRLISGAIAGGVSRTAVAPLETIR 144


>tr|A9SAY1|A9SAY1_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_33011 PE=3 SV=1
          Length = 306

 Score = 60.8 bits (146), Expect = 6e-08
 Identities = 33/48 (68%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
 Frame = +1

Query: 484 VKKRQKSKRNH-RPLRFKVGNASAKRLLSGAFAGAVSRTAVAPLETIR 624
           VK+++KSKR   +  + KVGNAS +RL+SGA AGAVSRTAVAPLETIR
Sbjct: 1   VKEKKKSKRVFFKGFKLKVGNASLRRLISGAVAGAVSRTAVAPLETIR 48


>tr|A9T229|A9T229_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_139057 PE=3 SV=1
          Length = 320

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 31/46 (67%), Positives = 36/46 (78%)
 Frame = +1

Query: 487 KKRQKSKRNHRPLRFKVGNASAKRLLSGAFAGAVSRTAVAPLETIR 624
           KK+Q  K   +  + KVGNAS +RL+SGA AGAVSRTAVAPLETIR
Sbjct: 2   KKKQPKKIVFKGFKLKVGNASLRRLISGAVAGAVSRTAVAPLETIR 47


>tr|Q6E5A5|Q6E5A5_HORVD Plastidial ADP-glucose transporter
           OS=Hordeum vulgare var. distichum PE=2 SV=2
          Length = 425

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 29/49 (59%), Positives = 36/49 (73%)
 Frame = +1

Query: 478 RKVKKRQKSKRNHRPLRFKVGNASAKRLLSGAFAGAVSRTAVAPLETIR 624
           +K KK +K +   R +R K+GN   +RL+SGA AGAVSRT VAPLETIR
Sbjct: 90  QKAKKAKKQQLGLRKVRVKIGNPHLRRLVSGAIAGAVSRTFVAPLETIR 138


>tr|B6TVG6|B6TVG6_MAIZE Protein brittle-1 OS=Zea mays PE=2 SV=1
          Length = 406

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = +1

Query: 493 RQKSKRNHRPLRFKVGNASAKRLLSGAFAGAVSRTAVAPLETIR 624
           R K K+    L+ KVGN   KRL+SGA AGAVSRTAVAPLETIR
Sbjct: 107 RDKGKKKVVKLKIKVGNHHLKRLISGAIAGAVSRTAVAPLETIR 150


>tr|B4FQD1|B4FQD1_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 406

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = +1

Query: 493 RQKSKRNHRPLRFKVGNASAKRLLSGAFAGAVSRTAVAPLETIR 624
           R K K+    L+ KVGN   KRL+SGA AGAVSRTAVAPLETIR
Sbjct: 107 RDKGKKKVVKLKIKVGNHHLKRLISGAIAGAVSRTAVAPLETIR 150


>tr|B2LWG5|B2LWG5_MAIZE Nucleotide sugar translocator BT2A OS=Zea
           mays GN=BT2A PE=2 SV=1
          Length = 406

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = +1

Query: 493 RQKSKRNHRPLRFKVGNASAKRLLSGAFAGAVSRTAVAPLETIR 624
           R K K+    L+ KVGN   KRL+SGA AGAVSRTAVAPLETIR
Sbjct: 107 RDKGKKKVVKLKIKVGNHHLKRLISGAIAGAVSRTAVAPLETIR 150


>tr|Q9SUV1|Q9SUV1_ARATH Adenylate translocator (Brittle-1)-like
           protein (AT4g32400/F8B4_100) OS=Arabidopsis thaliana
           GN=F8B4.100 PE=2 SV=1
          Length = 392

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 28/46 (60%), Positives = 35/46 (76%)
 Frame = +1

Query: 487 KKRQKSKRNHRPLRFKVGNASAKRLLSGAFAGAVSRTAVAPLETIR 624
           +KR++ K+    L+ K+ N S +RLLSGA AGAVSRT VAPLETIR
Sbjct: 90  EKRKRKKKGGLTLKIKIANPSLRRLLSGAVAGAVSRTVVAPLETIR 135


>tr|Q65XR7|Q65XR7_ORYSJ Os05g0171300 protein OS=Oryza sativa subsp.
           japonica GN=P0685E10.12 PE=2 SV=1
          Length = 415

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 30/48 (62%), Positives = 33/48 (68%)
 Frame = +1

Query: 481 KVKKRQKSKRNHRPLRFKVGNASAKRLLSGAFAGAVSRTAVAPLETIR 624
           K KK +K       L+ KVGN   KRL+SG  AGAVSRTAVAPLETIR
Sbjct: 112 KGKKNKKKTNKAFKLKIKVGNPHLKRLISGGIAGAVSRTAVAPLETIR 159


>tr|A3B0F2|A3B0F2_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_016524 PE=3 SV=1
          Length = 377

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 30/48 (62%), Positives = 33/48 (68%)
 Frame = +1

Query: 481 KVKKRQKSKRNHRPLRFKVGNASAKRLLSGAFAGAVSRTAVAPLETIR 624
           K KK +K       L+ KVGN   KRL+SG  AGAVSRTAVAPLETIR
Sbjct: 112 KGKKNKKKTNKAFKLKIKVGNPHLKRLISGGIAGAVSRTAVAPLETIR 159