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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955534
Clone id TST39A01NGRL0023_F17
Library
Length 585
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_F17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTGAATTTCAAGCAGTTATGGCCTCCACCACCCTCTCCTCCTCCCTCTGCGGCCAGGCTG
TCCTGAAGCAGCAGGTCAGCGAGCTGTCGCGCAAGGTGGGCGCCTATGAGGCCCGCGTGC
AGATGAAGACCAGCAAGGGCTCCAGCAGCAGCATCTGGTATGGACCGGACCGCCCCCTCT
ACCTGGGCCCCCTCTCCGGTTCTCCCCCTTCCTACCTCACTGGGGAATTCCCCGGGGACT
ACGGCTGGGACACGGCCGGCCTGTCCGCCGACCCTGAGACCTTCGCCAAGAACCGGGAGC
TGGAGGTCATCCACGCGCGTTGGGCGATGCTTGGCGCCCTGGGCTGCGTCACCCCGGAGC
TGCTGGCCAAAAACGGCGTCCCGTTCGGCGAAGCCGTCTGGTTCAAGGCCGGCTCGCAGA
TCTTCAGTGACGGCGGGCTGGACTACCTGGGCAACCCCGGCCTGATACACGCTCAGAGCA
TCCTCGCCATCTGGGCCTGCCAGGTCATCCTCATGGGCGCTGTGGAGGGCTACCGAGTGG
CCGGCGGCCCGTTGGGCGACGTGTCGGACCCCGTCTACCCGGGCG
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 193
Score (bit) 283.0
E-value 4.0e-76
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955534|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_F17, 5'
         (585 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   283   4e-76
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   269   7e-72
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   266   4e-71
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   265   2e-70
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   263   5e-70
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   263   6e-70
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   263   6e-70
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   262   1e-69
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   262   1e-69
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   261   1e-69
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   261   2e-69
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   261   2e-69
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   261   2e-69
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   260   3e-69
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   260   4e-69
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...   260   4e-69
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   259   7e-69
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   258   1e-68
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   258   1e-68
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   258   2e-68
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   258   2e-68
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   258   2e-68
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   257   3e-68
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   257   3e-68
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   257   3e-68
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   256   4e-68
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   256   4e-68
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   256   4e-68
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   256   4e-68
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   256   8e-68

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  283 bits (724), Expect = 4e-76
 Identities = 144/193 (74%), Positives = 158/193 (81%), Gaps = 4/193 (2%)
 Frame = +3

Query: 18  MASTT--LSSSLCGQAVLKQQVSELSRKVGAYEARVQMKT--SKGSSSSIWYGPDRXXXX 185
           MA++T  L+S+  GQ +  + V+ELSRKVGA EARVQM    SK  S SIWYG DR    
Sbjct: 1   MATSTAALTSTFSGQQL--KPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYL 58

Query: 186 XXXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 365
                      +GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELL
Sbjct: 59  GPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 118

Query: 366 AKNGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAG 545
           AKNGV FGEAVWFKAGSQIF++GGLDYLGNP L+HAQSILAIWACQVILMGAVEGYRVAG
Sbjct: 119 AKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 178

Query: 546 GPLGDVSDPVYPG 584
           GPLG+V DP+YPG
Sbjct: 179 GPLGEVEDPIYPG 191


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  269 bits (688), Expect = 7e-72
 Identities = 135/188 (71%), Positives = 145/188 (77%), Gaps = 1/188 (0%)
 Frame = +3

Query: 24  STTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMK-TSKGSSSSIWYGPDRXXXXXXXXX 200
           ST   S+  GQ +LK Q +EL RKVG    RV M+ T K +  SIWYGPDR         
Sbjct: 4   STIQQSAFAGQTLLKPQ-NELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSE 62

Query: 201 XXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGV 380
                 TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGV
Sbjct: 63  QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGV 122

Query: 381 PFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLGD 560
            FGEAVWFKAGSQIF +GGLDYLGNP L+HAQSILAIWACQV+LMGAVEGYRV GGPLG+
Sbjct: 123 KFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGE 182

Query: 561 VSDPVYPG 584
             D +YPG
Sbjct: 183 GLDQLYPG 190


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  266 bits (681), Expect = 4e-71
 Identities = 133/192 (69%), Positives = 154/192 (80%), Gaps = 4/192 (2%)
 Frame = +3

Query: 21  ASTTLSSSLCGQAVLKQQVSELSRKV-GAYEARVQMK---TSKGSSSSIWYGPDRXXXXX 188
           A+   S++L GQ+++K  V+ELSRKV G  EARV M+   +    S +IWYG DR     
Sbjct: 4   ATAMHSTALAGQSLVKP-VNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLG 62

Query: 189 XXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 368
                      GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLA
Sbjct: 63  PFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLA 122

Query: 369 KNGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGG 548
           K+GV FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWACQV+LMGAVEGYRVAGG
Sbjct: 123 KSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGG 182

Query: 549 PLGDVSDPVYPG 584
           PLG+V+DP+YPG
Sbjct: 183 PLGEVTDPIYPG 194



 Score = 30.8 bits (68), Expect = 5.2
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 228 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 377
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  265 bits (676), Expect = 2e-70
 Identities = 129/189 (68%), Positives = 146/189 (77%), Gaps = 1/189 (0%)
 Frame = +3

Query: 21  ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMK-TSKGSSSSIWYGPDRXXXXXXXX 197
           AS   SSSL GQ +L+ Q +EL +KVG  +AR+ M+ T + +  SIWYGPDR        
Sbjct: 4   ASAIQSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFS 63

Query: 198 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 377
                  TGEFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCV PELLAKNG
Sbjct: 64  EGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNG 123

Query: 378 VPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLG 557
           + FGEAVWFKAG+QIFS+GGLDY GNP LIHAQSILAIWACQV+LMG +EGYRV GG LG
Sbjct: 124 LKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLG 183

Query: 558 DVSDPVYPG 584
           +  DP+ PG
Sbjct: 184 EGLDPLLPG 192


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  263 bits (672), Expect = 5e-70
 Identities = 133/189 (70%), Positives = 145/189 (76%), Gaps = 2/189 (1%)
 Frame = +3

Query: 24  STTLSSSLCGQAVLKQQVSELSRKVGAYEA-RVQMK-TSKGSSSSIWYGPDRXXXXXXXX 197
           S    S+  GQ  LKQ  +EL  K+GA    RV M+ T K + +SIWYGPDR        
Sbjct: 4   SAIQQSAFAGQTALKQS-NELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFS 62

Query: 198 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 377
                  TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNG
Sbjct: 63  DQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNG 122

Query: 378 VPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLG 557
           V FGEAVWFKAGSQIFS+GGLDYLGNP LIHAQSILAIWACQV+LMG VEGYRV GGPLG
Sbjct: 123 VKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLG 182

Query: 558 DVSDPVYPG 584
           +  DP+YPG
Sbjct: 183 EGLDPIYPG 191


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 267

 Score =  263 bits (671), Expect = 6e-70
 Identities = 138/198 (69%), Positives = 152/198 (76%), Gaps = 9/198 (4%)
 Frame = +3

Query: 18  MASTTL---SSSLCGQAV-LKQQVSELSRKVGAYEARVQMKTSKGS-----SSSIWYGPD 170
           MAS+T+   S SL G+AV L    SE+   +G  E R+ M+ + G      SSS WYGPD
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEI---IG--EGRITMRKTAGKPKTVQSSSPWYGPD 55

Query: 171 RXXXXXXXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCV 350
           R               TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV
Sbjct: 56  RVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 115

Query: 351 TPELLAKNGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEG 530
            PELLA+NGV FGEAVWFKAGSQIFS+GGLDYLGNP L+HAQSILAIWACQVILMGAVEG
Sbjct: 116 FPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG 175

Query: 531 YRVAGGPLGDVSDPVYPG 584
           YR+AGGPLG+V DP+YPG
Sbjct: 176 YRIAGGPLGEVVDPLYPG 193


>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16,
           chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1
          Length = 266

 Score =  263 bits (671), Expect = 6e-70
 Identities = 131/189 (69%), Positives = 143/189 (75%), Gaps = 1/189 (0%)
 Frame = +3

Query: 21  ASTTLSSSLCGQAV-LKQQVSELSRKVGAYEARVQMKTSKGSSSSIWYGPDRXXXXXXXX 197
           ++T LSS   G+AV L    SE++        +   K    SS S WYGPDR        
Sbjct: 4   STTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFS 63

Query: 198 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 377
                  TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NG
Sbjct: 64  GESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 123

Query: 378 VPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLG 557
           V FGEAVWFKAGSQIFS+GGLDYLGNP L+HAQSILAIWACQV+LMGAVEGYRVAGGPLG
Sbjct: 124 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 183

Query: 558 DVSDPVYPG 584
           +V DP+YPG
Sbjct: 184 EVVDPLYPG 192


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  262 bits (669), Expect = 1e-69
 Identities = 131/193 (67%), Positives = 146/193 (75%), Gaps = 4/193 (2%)
 Frame = +3

Query: 18  MASTTL---SSSLCGQAV-LKQQVSELSRKVGAYEARVQMKTSKGSSSSIWYGPDRXXXX 185
           MA++T+   SS+  G+AV L    SE++        +   K    SS S WYGPDR    
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 186 XXXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 365
                      TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 366 AKNGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAG 545
           A+NGV FGEAVWFKAGSQIFS+GGLDYLGNP L+HAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 546 GPLGDVSDPVYPG 584
           GPLG+V DP+YPG
Sbjct: 181 GPLGEVVDPLYPG 193


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  262 bits (669), Expect = 1e-69
 Identities = 130/189 (68%), Positives = 144/189 (76%), Gaps = 1/189 (0%)
 Frame = +3

Query: 21  ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMK-TSKGSSSSIWYGPDRXXXXXXXX 197
           AS   SS+  GQ  LKQ+  EL RKVG  + R  M+ T K    SIWYG DR        
Sbjct: 3   ASAIQSSAFAGQTALKQR-DELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFS 61

Query: 198 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 377
                  TGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC+ PELL+KNG
Sbjct: 62  EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNG 121

Query: 378 VPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLG 557
           V FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWA QV+LMG +EGYRV GGPLG
Sbjct: 122 VQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLG 181

Query: 558 DVSDPVYPG 584
           +  DP+YPG
Sbjct: 182 EGLDPLYPG 190


>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25,
           chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1
          Length = 266

 Score =  261 bits (668), Expect = 1e-69
 Identities = 131/192 (68%), Positives = 144/192 (75%), Gaps = 3/192 (1%)
 Frame = +3

Query: 18  MASTTL---SSSLCGQAVLKQQVSELSRKVGAYEARVQMKTSKGSSSSIWYGPDRXXXXX 188
           MA+ T+   SSS  G+AV     S+++    A   +   K    SS S WYGPDR     
Sbjct: 1   MAAATMAISSSSFAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLG 60

Query: 189 XXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 368
                     TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL A
Sbjct: 61  PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFA 120

Query: 369 KNGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGG 548
           +NGV FGEAVWFKAGSQIFS+GGLDYLGNP L+HAQSILAIWACQV+LMGAVEGYRVAGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGG 180

Query: 549 PLGDVSDPVYPG 584
           PLG+V DP+YPG
Sbjct: 181 PLGEVIDPLYPG 192
tr_hit_id A9TL35
Definition tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 188
Score (bit) 281.0
E-value 1.0e-74
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955534|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_F17, 5'
         (585 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   281   1e-74
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   279   7e-74
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten...   279   9e-74
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   277   3e-73
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   277   3e-73
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten...   277   4e-73
tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   276   6e-73
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   276   6e-73
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   276   8e-73
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   274   2e-72
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   274   3e-72
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   273   5e-72
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   272   9e-72
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   271   1e-71
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   271   2e-71
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   271   3e-71
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   270   6e-71
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   269   7e-71
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   269   7e-71
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   268   1e-70
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   267   3e-70
tr|O64447|O64447_NICSY Light harvesting chlorophyll a/b-binding ...   267   4e-70
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten...   266   6e-70
tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea...   266   6e-70
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   266   8e-70
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran...   265   1e-69
tr|A9SGM1|A9SGM1_PHYPA Predicted protein OS=Physcomitrella paten...   265   1e-69
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   265   2e-69
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu...   264   2e-69
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC...   263   7e-69

>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  281 bits (720), Expect = 1e-74
 Identities = 140/188 (74%), Positives = 155/188 (82%)
 Frame = +3

Query: 21  ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMKTSKGSSSSIWYGPDRXXXXXXXXX 200
           A+   S++L GQ++LK  V+ELSRKVG  EARV M+ S GS S IWYG DR         
Sbjct: 4   ATAMHSTTLAGQSLLKP-VNELSRKVGTSEARVSMRKSSGSDS-IWYGADRPKFLGPFSG 61

Query: 201 XXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGV 380
                  GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGV
Sbjct: 62  ETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGV 121

Query: 381 PFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLGD 560
            FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWACQVILMGAVEGYRVAGGPLG+
Sbjct: 122 KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGE 181

Query: 561 VSDPVYPG 584
           V+DP+YPG
Sbjct: 182 VTDPIYPG 189


>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  279 bits (714), Expect = 7e-74
 Identities = 140/189 (74%), Positives = 155/189 (82%), Gaps = 1/189 (0%)
 Frame = +3

Query: 21  ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQM-KTSKGSSSSIWYGPDRXXXXXXXX 197
           A+   S++L GQ++LK  V+ELSRKVG  EAR+ M KT+  SS SIWYG DR        
Sbjct: 4   ATAMHSTALAGQSLLKP-VNELSRKVGNVEARISMRKTASKSSDSIWYGADRPKYLGPFS 62

Query: 198 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 377
                   GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNG
Sbjct: 63  GETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNG 122

Query: 378 VPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLG 557
           V FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWA QVILMGAVEGYRVAGGPLG
Sbjct: 123 VKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLG 182

Query: 558 DVSDPVYPG 584
           DV+DP+YPG
Sbjct: 183 DVTDPIYPG 191


>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1
          Length = 263

 Score =  279 bits (713), Expect = 9e-74
 Identities = 138/188 (73%), Positives = 156/188 (82%)
 Frame = +3

Query: 21  ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMKTSKGSSSSIWYGPDRXXXXXXXXX 200
           A+   S++L GQ++LK  V+ELSR+VGA EARV M+ S GS S IWYG DR         
Sbjct: 4   ATACASTALAGQSLLKP-VNELSRRVGANEARVTMRKSAGSDS-IWYGADRPKFLGPFSG 61

Query: 201 XXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGV 380
                  GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GV
Sbjct: 62  ETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGV 121

Query: 381 PFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLGD 560
            FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWACQVILMGAVEGYRVAGGPLG+
Sbjct: 122 KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGE 181

Query: 561 VSDPVYPG 584
           V+DP+YPG
Sbjct: 182 VTDPIYPG 189


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  277 bits (709), Expect = 3e-73
 Identities = 141/194 (72%), Positives = 155/194 (79%), Gaps = 3/194 (1%)
 Frame = +3

Query: 12  AVMASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMKTSKGSSS---SIWYGPDRXXX 182
           A  A+   S+ L GQA+LK  VSELSRKV A EARV M+ +   SS   SIWYG DR   
Sbjct: 2   ATAATAMNSTVLAGQALLKP-VSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 183 XXXXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPEL 362
                        GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 363 LAKNGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVA 542
           LAK+GV FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWACQVILMGAVEGYRVA
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180

Query: 543 GGPLGDVSDPVYPG 584
           GGPLGDV+DP+YPG
Sbjct: 181 GGPLGDVTDPIYPG 194


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  277 bits (709), Expect = 3e-73
 Identities = 141/194 (72%), Positives = 155/194 (79%), Gaps = 3/194 (1%)
 Frame = +3

Query: 12  AVMASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMKTSKGSSS---SIWYGPDRXXX 182
           A  A+   S+ L GQA+LK  VSELSRKV A EARV M+ +   SS   SIWYG DR   
Sbjct: 2   ATAATAMNSTVLAGQALLKP-VSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 183 XXXXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPEL 362
                        GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 363 LAKNGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVA 542
           LAK+GV FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWACQVILMGAVEGYRVA
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180

Query: 543 GGPLGDVSDPVYPG 584
           GGPLGDV+DP+YPG
Sbjct: 181 GGPLGDVTDPIYPG 194


>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1
          Length = 263

 Score =  277 bits (708), Expect = 4e-73
 Identities = 138/187 (73%), Positives = 153/187 (81%)
 Frame = +3

Query: 24  STTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMKTSKGSSSSIWYGPDRXXXXXXXXXX 203
           + T S++L GQ  LK  ++ELSRKVG  +ARV M+ +  SS SIWYG DR          
Sbjct: 5   TATHSTALAGQTALKS-INELSRKVGNVQARVTMRKAS-SSDSIWYGADRPKYLGPLSGE 62

Query: 204 XXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVP 383
                TGEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGV 
Sbjct: 63  TPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVK 122

Query: 384 FGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLGDV 563
           FGEAVWFKAGSQIFS+GGLDYLGNP L+HAQSILAIWA QVILMGAVEGYRVAGGPLG+V
Sbjct: 123 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGEV 182

Query: 564 SDPVYPG 584
           +DP+YPG
Sbjct: 183 TDPIYPG 189


>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus
           thunbergii GN=cab PE=4 SV=1
          Length = 266

 Score =  276 bits (706), Expect = 6e-73
 Identities = 134/189 (70%), Positives = 150/189 (79%), Gaps = 1/189 (0%)
 Frame = +3

Query: 21  ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMK-TSKGSSSSIWYGPDRXXXXXXXX 197
           AS   SSSL GQ +L+ Q +EL +KVG  +AR+ M+ T + +  SIWYGPDR        
Sbjct: 4   ASAIQSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFS 63

Query: 198 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 377
                  TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+ PELLAKNG
Sbjct: 64  EGTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPELLAKNG 123

Query: 378 VPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLG 557
           V FGEAVWFKAG+QIFS+GGLDYLGNP LIHAQSILAIWACQV+LMG +EGYRV GGPLG
Sbjct: 124 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLG 183

Query: 558 DVSDPVYPG 584
           +  DP+YPG
Sbjct: 184 EGLDPLYPG 192


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
          Length = 267

 Score =  276 bits (706), Expect = 6e-73
 Identities = 137/191 (71%), Positives = 154/191 (80%), Gaps = 3/191 (1%)
 Frame = +3

Query: 21  ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMK---TSKGSSSSIWYGPDRXXXXXX 191
           A+   S++L GQ VLK  V+ELSRKVG  EARV M+   +    S SIWYG DR      
Sbjct: 4   ATAMHSTALAGQGVLKP-VNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPKFLGP 62

Query: 192 XXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAK 371
                    TGEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK
Sbjct: 63  FSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 122

Query: 372 NGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGP 551
           +GV FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWACQV+LMGAVEGYRVAGGP
Sbjct: 123 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP 182

Query: 552 LGDVSDPVYPG 584
           LG+V+DP+YPG
Sbjct: 183 LGEVTDPIYPG 193


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
          Length = 265

 Score =  276 bits (705), Expect = 8e-73
 Identities = 136/189 (71%), Positives = 157/189 (83%), Gaps = 1/189 (0%)
 Frame = +3

Query: 21  ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMK-TSKGSSSSIWYGPDRXXXXXXXX 197
           A+   S++L GQ++LK  V+ELSRKVG+ EARV M+ T K +S SIWYG DR        
Sbjct: 4   ATAMHSTTLAGQSLLKP-VNELSRKVGSSEARVTMRRTVKSTSDSIWYGADRPKYLGPFS 62

Query: 198 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 377
                  TGEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+G
Sbjct: 63  GETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSG 122

Query: 378 VPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGPLG 557
           V FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWA QV+LMGAVEGYRVAGGPLG
Sbjct: 123 VKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRVAGGPLG 182

Query: 558 DVSDPVYPG 584
           +++DP+YPG
Sbjct: 183 EITDPIYPG 191


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  274 bits (701), Expect = 2e-72
 Identities = 138/191 (72%), Positives = 154/191 (80%), Gaps = 3/191 (1%)
 Frame = +3

Query: 21  ASTTLSSSLCGQAVLKQQVSELSRKVGAYEARVQMKTS---KGSSSSIWYGPDRXXXXXX 191
           A+   S++L GQ++LK  V+ELSRKVG  EARV M+ S     +S SIWYG DR      
Sbjct: 4   ATAMHSTALAGQSLLKP-VNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYLGP 62

Query: 192 XXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAK 371
                     GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK
Sbjct: 63  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 122

Query: 372 NGVPFGEAVWFKAGSQIFSDGGLDYLGNPGLIHAQSILAIWACQVILMGAVEGYRVAGGP 551
           +GV FGEAVWFKAG+QIFS+GGLDYLGNP L+HAQSILAIWA QVILMGAVEGYRVAGGP
Sbjct: 123 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGP 182

Query: 552 LGDVSDPVYPG 584
           LGDV+DP+YPG
Sbjct: 183 LGDVTDPIYPG 193