DK955540 |
Clone id |
TST39A01NGRL0023_F23 |
Library |
TST39 |
Length |
602 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_F23. 5' end sequence. |
Accession |
DK955540 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1268Contig1 |
Sequence |
GATATTGAATGCAGTATATGCCTAGATAGAGTTCTGTCAAAGCCAACTAATGCAGAGAGA AAGTTTGGTTTGCTTTCTGGATGTGACCACCCTTTCTGCATATCATGTATAAGAGATTGG CGTAGTACTTCTCAACCGCAAGGGTCAGGATCCGATGCTATAGTACGACTCTGTCCTGTG TGTCGAGTGCTCTCATACTACGTTATTCCTAGTGTCATCTGGTATTCCAATGTGGAGGAA AAGCAAGAAATTATTGATGGATACAAAGCTAGGGTCAGAGACATTGATTGTAAACACTTT GACTTTGGCAATGGGAGGTGCCAGTTTGGCACTAGTTGTTTCTATAAGCATGCCTTCAGA GATGGCACAACAGAGGAAGTGAAGTTACGCCATCTTGGTGCGGCAGATGGTAATACTGTT ATAGCGAAGGATGTTCGCTTGTCAGAGTTTTTGGGTAGGTTAAACCTCAGACGCTAGTTG AGAATGAAAGGATTTTCTATACAGATTCGAATCAGGGATTTCTGGTGGAGCAAGCTCAAT AATACATGTTGCCTTTGAGTCCTTCATTGGCCATGCTTCGTGTTCGTGGTGTTTGCTATA TC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5ZA07 |
Definition |
sp|Q5ZA07|C3H41_ORYSJ Zinc finger CCCH domain-containing protein 41 OS=Oryza sativa subsp. japonica |
Align length |
150 |
Score (bit) |
233.0 |
E-value |
6.0e-61 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T2C7 |
Definition |
tr|A9T2C7|A9T2C7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
148 |
Score (bit) |
243.0 |
E-value |
5.0e-63 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955540|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_F23, 5' (602 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T2C7|A9T2C7_PHYPA Predicted protein (Fragment) OS=Physcomit... 243 5e-63 tr|A5B1G2|A5B1G2_VITVI Putative uncharacterized protein OS=Vitis... 241 2e-62 tr|B7F5N8|B7F5N8_ORYSJ cDNA clone:J013045F22, full insert sequen... 233 6e-60 tr|A3BB67|A3BB67_ORYSJ Putative uncharacterized protein OS=Oryza... 233 6e-60 tr|B8B148|B8B148_ORYSI Putative uncharacterized protein OS=Oryza... 232 1e-59 tr|Q6IDS6|Q6IDS6_ARATH Putative uncharacterized protein At3g0850... 226 1e-57 tr|B7ZZ08|B7ZZ08_MAIZE Putative uncharacterized protein OS=Zea m... 218 2e-55 tr|A8J950|A8J950_CHLRE Predicted protein (Fragment) OS=Chlamydom... 170 5e-41 tr|Q7X7W8|Q7X7W8_PEA Makorin ring-zinc-finger protein (Makorin R... 169 1e-40 tr|Q76KB3|Q76KB3_PEA Makorin ring-zinc-finger protein (Fragment)... 169 1e-40 tr|A9P800|A9P800_POPTR Putative uncharacterized protein OS=Popul... 160 7e-38 tr|Q01C50|Q01C50_OSTTA Putative makorin RING finger protein (ISS... 155 2e-36 tr|A4RUZ1|A4RUZ1_OSTLU Predicted protein (Fragment) OS=Ostreococ... 148 2e-34 tr|A9UUB3|A9UUB3_MONBE Predicted protein (Fragment) OS=Monosiga ... 144 3e-33 tr|A7SZF4|A7SZF4_NEMVE Predicted protein OS=Nematostella vectens... 140 6e-32 tr|B6LHA9|B6LHA9_BRAFL Putative uncharacterized protein (Fragmen... 138 2e-31 tr|Q91457|Q91457_SERQU YGHL2 (Fragment) OS=Seriola quinqueradiat... 135 2e-30 tr|Q90WG5|Q90WG5_SERQU Zinc finger protein YGHLC3HC4 (Fragment) ... 135 2e-30 tr|Q90WG4|Q90WG4_SERQU Zinc finger protein (Fragment) OS=Seriola... 135 2e-30 tr|Q8UWH3|Q8UWH3_CHICK Makorin-2 OS=Gallus gallus GN=MKRN2 PE=2 ... 135 2e-30 tr|Q54A73|Q54A73_SERQU Ring finger protein MAKORIN2 (Makorin rin... 135 2e-30 tr|Q1T784|Q1T784_MUSCR Makorin1 (Fragment) OS=Mus caroli GN=Mako... 134 3e-30 tr|Q8C5V4|Q8C5V4_MOUSE Putative uncharacterized protein OS=Mus m... 134 5e-30 tr|Q4T1Z7|Q4T1Z7_TETNG Chromosome undetermined SCAF10407, whole ... 133 7e-30 tr|Q9PTI4|Q9PTI4_CHICK Makorin 1 OS=Gallus gallus GN=MKRN1 PE=2 ... 133 9e-30 tr|Q4R8U6|Q4R8U6_MACFA Testis cDNA clone: QtsA-11438, similar to... 133 9e-30 tr|B4DM96|B4DM96_HUMAN cDNA FLJ58200, highly similar to Makorin-... 133 9e-30 tr|B3KXB4|B3KXB4_HUMAN cDNA FLJ45086 fis, clone BRAWH3028796, hi... 133 9e-30 tr|A4D1T7|A4D1T7_HUMAN Makorin, ring finger protein, 1 (Makorin,... 133 9e-30 tr|Q2YDI8|Q2YDI8_BOVIN Makorin ring finger protein 2 OS=Bos taur... 132 2e-29
>tr|A9T2C7|A9T2C7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_139138 PE=4 SV=1 Length = 324
Score = 243 bits (621), Expect = 5e-63 Identities = 107/148 (72%), Positives = 127/148 (85%) Frame = +1
Query: 1 DIECSICLDRVLSKPTNAERKFGLLSGCDHPFCISCIRDWRSTSQPQGSGSDAIVRLCPV 180 DIECSICL+RVLSKPT AERKFGL+SGCDHPFC+ CIR WRS S G D +VR CPV Sbjct: 167 DIECSICLERVLSKPTVAERKFGLMSGCDHPFCVGCIRGWRSGSHAPGMDIDTVVRACPV 226
Query: 181 CRVLSYYVIPSVIWYSNVEEKQEIIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFR 360 CRV ++YV+PSV+WY + EEK+EII+GYK ++ ++DC+HFD+GNG C FGTSCFYKHAF+ Sbjct: 227 CRVPTHYVVPSVVWYFSPEEKEEIINGYKNKLGEVDCRHFDYGNGTCPFGTSCFYKHAFK 286
Query: 361 DGTTEEVKLRHLGAADGNTVIAKDVRLS 444 DGT EEVKLRHLGAADGNTVI K+VRL+ Sbjct: 287 DGTLEEVKLRHLGAADGNTVIVKNVRLA 314
>tr|A5B1G2|A5B1G2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028611 PE=4 SV=1 Length = 428
Score = 241 bits (616), Expect = 2e-62 Identities = 108/148 (72%), Positives = 125/148 (84%) Frame = +1
Query: 1 DIECSICLDRVLSKPTNAERKFGLLSGCDHPFCISCIRDWRSTSQPQGSGSDAIVRLCPV 180 +IECS+CLDRVLSKPT AERKFGLLS CDHPFCISCIR+WRS+S G + +R CP+ Sbjct: 240 EIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPASGMDINTALRACPI 299
Query: 181 CRVLSYYVIPSVIWYSNVEEKQEIIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFR 360 CR LSY+VIPSVIWYS EEKQEI+D YKA++R IDCKHFDFGNG C FGTSCFYKHA+R Sbjct: 300 CRKLSYFVIPSVIWYSTKEEKQEIVDSYKAKLRSIDCKHFDFGNGTCPFGTSCFYKHAYR 359
Query: 361 DGTTEEVKLRHLGAADGNTVIAKDVRLS 444 DG EEV LRHLGA DG+ +IAK++R+S Sbjct: 360 DGRLEEVVLRHLGAEDGHVMIAKNIRMS 387
>tr|B7F5N8|B7F5N8_ORYSJ cDNA clone:J013045F22, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 368
Score = 233 bits (594), Expect = 6e-60 Identities = 105/150 (70%), Positives = 125/150 (83%) Frame = +1
Query: 1 DIECSICLDRVLSKPTNAERKFGLLSGCDHPFCISCIRDWRSTSQPQGSGSDAIVRLCPV 180 +IECS+CLDRVLSKPT AERKFGLLS CDHPFCISCIR+WR+ S G ++ +R CP+ Sbjct: 213 EIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRNNSPTSGMDVNSALRACPI 272
Query: 181 CRVLSYYVIPSVIWYSNVEEKQEIIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFR 360 CR LSYYVIPSV+WY + EEK EIID YKA+++ IDCK+FDFG G C FG+SCFYKHA+R Sbjct: 273 CRKLSYYVIPSVLWYFSKEEKLEIIDNYKAKLKSIDCKYFDFGTGTCPFGSSCFYKHAYR 332
Query: 361 DGTTEEVKLRHLGAADGNTVIAKDVRLSEF 450 DG EEV LRHL A DG+TVIAK++RLS+F Sbjct: 333 DGRLEEVILRHLDADDGSTVIAKNIRLSDF 362
>tr|A3BB67|A3BB67_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_020289 PE=4 SV=1 Length = 364
Score = 233 bits (594), Expect = 6e-60 Identities = 105/150 (70%), Positives = 125/150 (83%) Frame = +1
Query: 1 DIECSICLDRVLSKPTNAERKFGLLSGCDHPFCISCIRDWRSTSQPQGSGSDAIVRLCPV 180 +IECS+CLDRVLSKPT AERKFGLLS CDHPFCISCIR+WR+ S G ++ +R CP+ Sbjct: 209 EIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRNNSPTSGMDVNSALRACPI 268
Query: 181 CRVLSYYVIPSVIWYSNVEEKQEIIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFR 360 CR LSYYVIPSV+WY + EEK EIID YKA+++ IDCK+FDFG G C FG+SCFYKHA+R Sbjct: 269 CRKLSYYVIPSVLWYFSKEEKLEIIDNYKAKLKSIDCKYFDFGTGTCPFGSSCFYKHAYR 328
Query: 361 DGTTEEVKLRHLGAADGNTVIAKDVRLSEF 450 DG EEV LRHL A DG+TVIAK++RLS+F Sbjct: 329 DGRLEEVILRHLDADDGSTVIAKNIRLSDF 358
>tr|B8B148|B8B148_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22743 PE=4 SV=1 Length = 368
Score = 232 bits (591), Expect = 1e-59 Identities = 104/150 (69%), Positives = 125/150 (83%) Frame = +1
Query: 1 DIECSICLDRVLSKPTNAERKFGLLSGCDHPFCISCIRDWRSTSQPQGSGSDAIVRLCPV 180 +IECS+CLDRVLSKPT AERKFGLLS CDHPFCISCIR+WR+ S G ++ +R CP+ Sbjct: 213 EIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRNNSPTSGMDVNSALRACPI 272
Query: 181 CRVLSYYVIPSVIWYSNVEEKQEIIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFR 360 CR LSYYVIPSV+WY + EEK EIID YKA+++ IDCK+FDFG G C FG+SCFYKHA++ Sbjct: 273 CRKLSYYVIPSVLWYFSKEEKLEIIDNYKAKLKSIDCKYFDFGTGTCPFGSSCFYKHAYK 332
Query: 361 DGTTEEVKLRHLGAADGNTVIAKDVRLSEF 450 DG EEV LRHL A DG+TVIAK++RLS+F Sbjct: 333 DGRLEEVILRHLDADDGSTVIAKNIRLSDF 362
>tr|Q6IDS6|Q6IDS6_ARATH Putative uncharacterized protein At3g08505 OS=Arabidopsis thaliana GN=At3g08505 PE=2 SV=1 Length = 323
Score = 226 bits (575), Expect = 1e-57 Identities = 99/150 (66%), Positives = 121/150 (80%) Frame = +1
Query: 1 DIECSICLDRVLSKPTNAERKFGLLSGCDHPFCISCIRDWRSTSQPQGSGSDAIVRLCPV 180 DIECS+CLDR+LSK T ERKFGLL+ CDHPFCI CIR+WRS++ G ++ +R CP+ Sbjct: 167 DIECSVCLDRILSKATPGERKFGLLTECDHPFCIQCIRNWRSSAPVSGMDVNSTLRACPI 226
Query: 181 CRVLSYYVIPSVIWYSNVEEKQEIIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFR 360 CR LSY+V+PSV+WYS+ EEK+EIID YKA++R IDCKHF+FGNG C FG SCFYKHA+ Sbjct: 227 CRKLSYFVVPSVVWYSSPEEKKEIIDIYKAKLRSIDCKHFNFGNGNCPFGASCFYKHAYS 286
Query: 361 DGTTEEVKLRHLGAADGNTVIAKDVRLSEF 450 DG EEV LRHLG+ +G TVI +RLSEF Sbjct: 287 DGHLEEVVLRHLGSQEGETVITDSIRLSEF 316
>tr|B7ZZ08|B7ZZ08_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 365
Score = 218 bits (555), Expect = 2e-55 Identities = 97/148 (65%), Positives = 116/148 (78%) Frame = +1
Query: 1 DIECSICLDRVLSKPTNAERKFGLLSGCDHPFCISCIRDWRSTSQPQGSGSDAIVRLCPV 180 DIEC +CLDRVLSKPT AER+FGLLS CDH FCISCIR+WRSTS G ++ +R CP+ Sbjct: 210 DIECGVCLDRVLSKPTAAERRFGLLSDCDHSFCISCIRNWRSTSPTSGMDVNSTLRACPI 269
Query: 181 CRVLSYYVIPSVIWYSNVEEKQEIIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFR 360 CR LSYYV+PS+ WYS+ EEKQEI++GYKA++R IDCKHFDFG G C FG+SCFYKHA+ Sbjct: 270 CRKLSYYVVPSITWYSSKEEKQEIVEGYKAKLRSIDCKHFDFGKGTCPFGSSCFYKHAYD 329
Query: 361 DGTTEEVKLRHLGAADGNTVIAKDVRLS 444 DG E+ L H A D + IAK +RLS Sbjct: 330 DGRLEDALLNHHDADDASAAIAKLMRLS 357
>tr|A8J950|A8J950_CHLRE Predicted protein (Fragment) OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_105687 PE=4 SV=1 Length = 328
Score = 170 bits (431), Expect = 5e-41 Identities = 72/150 (48%), Positives = 101/150 (67%) Frame = +1
Query: 1 DIECSICLDRVLSKPTNAERKFGLLSGCDHPFCISCIRDWRSTSQPQGSGSDAIVRLCPV 180 D+EC ICL+ V+ KP+ ++R+FGL+ CDH FC++CIR WR + +D VR CP+ Sbjct: 165 DVECGICLEHVMHKPSVSDRRFGLMD-CDHAFCLACIRSWRERNTDASLATDTAVRTCPI 223
Query: 181 CRVLSYYVIPSVIWYSNVEEKQEIIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKHAFR 360 CR +++V PS++W + EEK+ I+ YKA++ IDC+HF FG+G C F TSCFY+HA+R Sbjct: 224 CRTCTHFVTPSLVWPATAEEKEAIVGAYKAKLGTIDCRHFAFGDGTCPFSTSCFYRHAYR 283
Query: 361 DGTTEEVKLRHLGAADGNTVIAKDVRLSEF 450 DG E LR G ADG + +RLS F Sbjct: 284 DGRLEVPVLRRAGNADGEVRVVAPLRLSAF 313
>tr|Q7X7W8|Q7X7W8_PEA Makorin ring-zinc-finger protein (Makorin RING finger protein) OS=Pisum sativum GN=MKRN PE=2 SV=1 Length = 461
Score = 169 bits (428), Expect = 1e-40 Identities = 77/126 (61%), Positives = 94/126 (74%), Gaps = 3/126 (2%) Frame = +1
Query: 1 DIECSICLDRVLSKPTNAERKFGLLSGCDHPFCISCIRDWRST---SQPQGSGSDAIVRL 171 +IEC++CL+ VLSKP +ERKFGLL CDH FC+SCIR+WR++ S+ + + VR Sbjct: 195 EIECNVCLEHVLSKPKPSERKFGLLPECDHAFCLSCIRNWRNSAPSSEFETGNNINTVRT 254
Query: 172 CPVCRVLSYYVIPSVIWYSNVEEKQEIIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKH 351 CPVCR LSY+VIPS IWY+ EEKQEIID YKA R IDCKHF+ GNG C FG SCFYKH Sbjct: 255 CPVCRQLSYFVIPSGIWYTTKEEKQEIIDNYKANCRLIDCKHFESGNGNCPFGASCFYKH 314
Query: 352 AFRDGT 369 + G+ Sbjct: 315 TVKPGS 320
>tr|Q76KB3|Q76KB3_PEA Makorin ring-zinc-finger protein (Fragment) OS=Pisum sativum GN=MKRN PE=2 SV=1 Length = 411
Score = 169 bits (428), Expect = 1e-40 Identities = 77/126 (61%), Positives = 94/126 (74%), Gaps = 3/126 (2%) Frame = +1
Query: 1 DIECSICLDRVLSKPTNAERKFGLLSGCDHPFCISCIRDWRST---SQPQGSGSDAIVRL 171 +IEC++CL+ VLSKP +ERKFGLL CDH FC+SCIR+WR++ S+ + + VR Sbjct: 145 EIECNVCLEHVLSKPKPSERKFGLLPECDHAFCLSCIRNWRNSAPSSEFETGNNINTVRT 204
Query: 172 CPVCRVLSYYVIPSVIWYSNVEEKQEIIDGYKARVRDIDCKHFDFGNGRCQFGTSCFYKH 351 CPVCR LSY+VIPS IWY+ EEKQEIID YKA R IDCKHF+ GNG C FG SCFYKH Sbjct: 205 CPVCRQLSYFVIPSGIWYTTKEEKQEIIDNYKANCRLIDCKHFESGNGNCPFGASCFYKH 264
Query: 352 AFRDGT 369 + G+ Sbjct: 265 TVKPGS 270
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