DK955549 |
Clone id |
TST39A01NGRL0023_G09 |
Library |
TST39 |
Length |
462 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_G09. 5' end sequence. |
Accession |
DK955549 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL800Contig1 |
Sequence |
AGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTGGGCAGTGCAATAGCCATGGCGGACG AGCCCAAATACGCCTACCCTTACCCCCCTCAGCAAGGTTATCCTCCTCAAGGCTACTACC AGCAGCCTCCTCCTGTAGCGGTTCCTCCTCAATACTCACAGGCACCTCCGCGGAGACCTG GCTTTCTTGAGGGCTGTTTAGCTGCCCTTTGTTGCTGTTGCCTGCTTGACGAGTGTTGCT GTGACCCCACCATCTTCATCAACTAACTGCTACATAAAACCAATTGTTGCAGAGTAGCTG AGAAGCTTTTGAGCCACAACATTGAGATTTTGCTCATGTGGAACTAGCGTCTTTTTTTTA ATCTTACACTCTCAATCATGTTGTATGTGTATTTGTAGCCAGTGTAATTGGAAGATGATA TACTTACCTTTTGTACAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6NV32 |
Definition |
sp|Q6NV32|PTMAA_DANRE Prothymosin alpha-A OS=Danio rerio |
Align length |
52 |
Score (bit) |
32.0 |
E-value |
1.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6K8A9 |
Definition |
tr|Q6K8A9|Q6K8A9_ORYSJ Os02g0288200 protein OS=Oryza sativa subsp. japonica |
Align length |
59 |
Score (bit) |
34.7 |
E-value |
2.4 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955549|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_G09, 5' (436 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6K8A9|Q6K8A9_ORYSJ Os02g0288200 protein OS=Oryza sativa subs... 35 2.4 tr|B8AFP0|B8AFP0_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.4 tr|A3A5N7|A3A5N7_ORYSJ Putative uncharacterized protein OS=Oryza... 35 2.4 tr|A2SEW9|A2SEW9_METPP Putative uncharacterized protein OS=Methy... 33 5.4 tr|Q4PTC0|Q4PTC0_9HIV1 Pol protein (Fragment) OS=Human immunodef... 33 7.1 tr|B7TF90|B7TF90_9HIV1 Pol protein (Fragment) OS=Human immunodef... 33 7.1 tr|Q6R2Q2|Q6R2Q2_ORYSI NBS-LRR-like protein A OS=Oryza sativa su... 33 7.1 tr|B6MU31|B6MU31_BRAFL Putative uncharacterized protein OS=Branc... 33 7.1 tr|A2F612|A2F612_TRIVA Ubiquitin-conjugating enzyme family prote... 33 7.1 tr|Q0CJV2|Q0CJV2_ASPTN Putative uncharacterized protein OS=Asper... 33 9.2
>tr|Q6K8A9|Q6K8A9_ORYSJ Os02g0288200 protein OS=Oryza sativa subsp. japonica GN=OJ1756_H07.29 PE=4 SV=1 Length = 578
Score = 34.7 bits (78), Expect = 2.4 Identities = 18/59 (30%), Positives = 32/59 (54%) Frame = -2
Query: 249 WGHSNTRQAGNSNKGQLNSPQESQVSAEVPVSIEEEPLQEEAAGSSLEEDNLAEGGKGR 73 WG N + AGNS+K + ++ +VS + + +E+ + E A + + LAE KG+ Sbjct: 290 WG-KNAKDAGNSSKNKKGQAKKDKVSGDSKEAAKEDKVDEAAIAVNEKGGTLAENKKGK 347
>tr|B8AFP0|B8AFP0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06790 PE=4 SV=1 Length = 556
Score = 34.7 bits (78), Expect = 2.4 Identities = 18/59 (30%), Positives = 32/59 (54%) Frame = -2
Query: 249 WGHSNTRQAGNSNKGQLNSPQESQVSAEVPVSIEEEPLQEEAAGSSLEEDNLAEGGKGR 73 WG N + AGNS+K + ++ +VS + + +E+ + E A + + LAE KG+ Sbjct: 268 WG-KNAKDAGNSSKNKKGQAKKDKVSGDSKEAAKEDKVDEAAIAVNEKGGTLAENKKGK 325
>tr|A3A5N7|A3A5N7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_006109 PE=4 SV=1 Length = 568
Score = 34.7 bits (78), Expect = 2.4 Identities = 18/59 (30%), Positives = 32/59 (54%) Frame = -2
Query: 249 WGHSNTRQAGNSNKGQLNSPQESQVSAEVPVSIEEEPLQEEAAGSSLEEDNLAEGGKGR 73 WG N + AGNS+K + ++ +VS + + +E+ + E A + + LAE KG+ Sbjct: 280 WG-KNAKDAGNSSKNKKGQAKKDKVSGDSKEAAKEDKVDEAAIAVNEKGGTLAENKKGK 337
>tr|A2SEW9|A2SEW9_METPP Putative uncharacterized protein OS=Methylibium petroleiphilum (strain PM1) GN=Mpe_A1147 PE=4 SV=1 Length = 136
Score = 33.5 bits (75), Expect = 5.4 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = -2
Query: 189 QESQVSAEVPVSIEEEPLQEEAAGSSLEEDNLAEGGKGRRIW 64 Q +V + PV E E L +A S E + A+GG GRR+W Sbjct: 90 QSIKVQPKGPVKAEYEVLPIDAGRDSAEGPSSAKGGAGRRVW 131
>tr|Q4PTC0|Q4PTC0_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=4 SV=1 Length = 1004
Score = 33.1 bits (74), Expect = 7.1 Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 5/63 (7%) Frame = -2
Query: 240 SNTRQAGNSNKGQLNSP-----QESQVSAEVPVSIEEEPLQEEAAGSSLEEDNLAEGGKG 76 SN R+AG +G LN P Q VS +V I+E L A + LEE NL+ K Sbjct: 42 SNPREAGVEGQGTLNCPQITLWQRPMVSIKVGGQIKEALLDTGADDTVLEEINLSGKWKP 101
Query: 75 RRI 67 R I Sbjct: 102 RMI 104
>tr|B7TF90|B7TF90_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=4 SV=1 Length = 1004
Score = 33.1 bits (74), Expect = 7.1 Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 5/63 (7%) Frame = -2
Query: 240 SNTRQAGNSNKGQLNSP-----QESQVSAEVPVSIEEEPLQEEAAGSSLEEDNLAEGGKG 76 SN R+AG +G LN P Q VS +V I+E L A + LEE NL+ K Sbjct: 42 SNPREAGVEGQGTLNCPQITLWQRPMVSIKVGGQIKEALLDTGADDTVLEEINLSGKWKP 101
Query: 75 RRI 67 R I Sbjct: 102 RMI 104
>tr|Q6R2Q2|Q6R2Q2_ORYSI NBS-LRR-like protein A OS=Oryza sativa subsp. indica GN=NL-A PE=4 SV=1 Length = 921
Score = 33.1 bits (74), Expect = 7.1 Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = -2
Query: 204 QLNSPQESQVSAEVPVSIEEEPLQEEAAGSSLEEDNLAEGGKGRR-IWARPPWLLHC 37 QL P + V E V IEEE +EE A EED A KG+ + R WLL C Sbjct: 684 QLEPPHD--VQEEEWVFIEEEFEEEEEAAEEGEEDGAASKQKGKEALSPRSSWLLPC 738
>tr|B6MU31|B6MU31_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_124709 PE=4 SV=1 Length = 1914
Score = 33.1 bits (74), Expect = 7.1 Identities = 20/58 (34%), Positives = 29/58 (50%) Frame = -2
Query: 246 GHSNTRQAGNSNKGQLNSPQESQVSAEVPVSIEEEPLQEEAAGSSLEEDNLAEGGKGR 73 G RQAGNS NS + S+ S+ VP + + ++ AA + DN E G G+ Sbjct: 12 GDPRDRQAGNS----ANSKKLSKTSSAVPRNSADSTYRDAAAATGAASDNKGEEGSGQ 65
>tr|A2F612|A2F612_TRIVA Ubiquitin-conjugating enzyme family protein OS=Trichomonas vaginalis G3 GN=TVAG_091080 PE=3 SV=1 Length = 352
Score = 33.1 bits (74), Expect = 7.1 Identities = 17/49 (34%), Positives = 28/49 (57%) Frame = -2
Query: 219 NSNKGQLNSPQESQVSAEVPVSIEEEPLQEEAAGSSLEEDNLAEGGKGR 73 N N+ Q N+ E+ +S E P IEEEP+QE + + L ++ + K + Sbjct: 189 NDNQEQPNNENENNISQETP--IEEEPVQENPSQNELAQEKPEDNVKNQ 235
>tr|Q0CJV2|Q0CJV2_ASPTN Putative uncharacterized protein OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_06032 PE=4 SV=1 Length = 1063
Score = 32.7 bits (73), Expect = 9.2 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = -2
Query: 252 WWGHSNTRQAGNSNKGQLNSPQESQVSAEVPVSIEEEP-LQEEAAGSSLEEDNLAEGGKG 76 W+ GNS +G+ N P +SQ+ P + P LQ + S D LA+ + Sbjct: 137 WYKQFADLMMGNSTRGRTNEPGDSQIRMPSPSQFQAAPSLQSNPSRHSTPADELAQ--RF 194
Query: 75 RRIWARPP 52 ++ A PP Sbjct: 195 AKLKASPP 202
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