DK955551
Clone id TST39A01NGRL0023_G11
Library
Length 593
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_G11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
CTGTCCTTTACCAACCAGTCGCCAGAATATGGCGGCACTGCTGGTGGATTGCCAACAGCT
CAGCATGCAGAAAAAATACAGTGGATCAGCCCATAAAGTGCTCACATGTCAGCACACGGA
AGGAAAAGCACAGAAACTGGCAGCTAGTAATCGCATCAGCTGCAGAGAATTCCGACGAGT
GACCTGGCGAACATCGAGCAGCTTGAAAATTTCAGCTGCTGACTTGGTGGAGATTGGCGT
ACTGTTACATACGCTGAGGTGGAACTCTCTGATTGGCAGAGCTGGAGAGTGTTCCAGGTG
CTGACATGGCAAGCCCTGCAACTGTTTTCCGGCTGAGCTGGCGCAAATCGGTCAGCTGCT
GGCTGGGATTCTGGATAGGAAACGCTCGTCATTAGACGGTAGCAATTAGCTGGTCCTCGA
CCTCCGACTTTGACGGTGACAGCAGAGGGCCTGTGCAGATGACATCTCAGCTTGGAGAAT
CTCCAGAGGTTGAAAGCAGCGTGTAAGTTTCCAACACATCACACAGGGAAGAAAAACAGT
GAGGAGCAAGATAGTGGTGGGAGAGTGTCTGTACAGCTGACACCTCAGCTTGG
■■Homology search results ■■ -
sp_hit_id Q54SV9
Definition sp|Q54SV9|C515B_DICDI Probable cytochrome P450 515B1 OS=Dictyostelium discoideum
Align length 57
Score (bit) 30.4
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955551|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_G11, 5'
(593 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54SV9|C515B_DICDI Probable cytochrome P450 515B1 OS=Dictyost... 30 7.0
sp|P0A422|PSAD_THEVL Photosystem I reaction center subunit II OS... 30 9.1
sp|P0A420|PSAD_THEEB Photosystem I reaction center subunit II OS... 30 9.1
sp|P0A421|PSAD_SYNEN Photosystem I reaction center subunit II OS... 30 9.1
sp|Q7KTX8|MED13_DROME Mediator of RNA polymerase II transcriptio... 30 9.1
sp|P15315|ACE1_YEAST Transcriptional activator protein ACE1 OS=S... 30 9.1

>sp|Q54SV9|C515B_DICDI Probable cytochrome P450 515B1
OS=Dictyostelium discoideum GN=cyp515b1 PE=2 SV=1
Length = 493

Score = 30.4 bits (67), Expect = 7.0
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -2

Query: 571 QTLSHHYLAPHCFSSLCDVLETYTLLSTSGDSPS*DVICTGPLLSPSKSEVEDQLIA 401
Q +S+ Y A +C D LE L P TGP + P K+ ED+L +
Sbjct: 394 QIISNIYSASNCDKVFTDPLEFNPLRFIENSPPQTVTFSTGPRVCPGKNLSEDELFS 450


>sp|P0A422|PSAD_THEVL Photosystem I reaction center subunit II
OS=Thermosynechococcus vulcanus GN=psaD PE=1 SV=2
Length = 139

Score = 30.0 bits (66), Expect = 9.1
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +1

Query: 4 SFTNQSPEYGGTAGGLPTAQHAEK---IQWISP 93
+ T Q P YGG+ GGL +A E+ I W SP
Sbjct: 3 TLTGQPPLYGGSTGGLLSAADTEEKYAITWTSP 35


>sp|P0A420|PSAD_THEEB Photosystem I reaction center subunit II
OS=Thermosynechococcus elongatus (strain BP-1) GN=psaD
PE=1 SV=2
Length = 139

Score = 30.0 bits (66), Expect = 9.1
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +1

Query: 4 SFTNQSPEYGGTAGGLPTAQHAEK---IQWISP 93
+ T Q P YGG+ GGL +A E+ I W SP
Sbjct: 3 TLTGQPPLYGGSTGGLLSAADTEEKYAITWTSP 35


>sp|P0A421|PSAD_SYNEN Photosystem I reaction center subunit II
OS=Synechococcus elongatus naegeli GN=psaD PE=1 SV=2
Length = 139

Score = 30.0 bits (66), Expect = 9.1
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +1

Query: 4 SFTNQSPEYGGTAGGLPTAQHAEK---IQWISP 93
+ T Q P YGG+ GGL +A E+ I W SP
Sbjct: 3 TLTGQPPLYGGSTGGLLSAADTEEKYAITWTSP 35


>sp|Q7KTX8|MED13_DROME Mediator of RNA polymerase II transcription
subunit 13 OS=Drosophila melanogaster GN=skd PE=1 SV=1
Length = 2618

Score = 30.0 bits (66), Expect = 9.1
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Frame = -1

Query: 449 PSAVTVKVGGRGPANCYRLMTSV-SYPESQPAADRFAPAQ-------PENSCRACHVSTW 294
P + T G GPA L T S P QPA A + P N+ A V T
Sbjct: 684 PPSYTDHAAGGGPAGGQGLGTGPGSVPAQQPATPTAATSAGGAGSGGPSNAIGANAVGTI 743

Query: 293 NTLQLCQSESSTSAYVTVRQSPPSQ 219
+ +L + + SA + ++Q P +Q
Sbjct: 744 SVKKLEMQQQTPSAAMAIKQEPGAQ 768


>sp|P15315|ACE1_YEAST Transcriptional activator protein ACE1
OS=Saccharomyces cerevisiae GN=ACE1 PE=1 SV=1
Length = 225

Score = 30.0 bits (66), Expect = 9.1
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Frame = +2

Query: 92 HKVLTCQHTEGKAQKLAASNRIS-----CREFRRV-TWRTSSSLKISAADLVEIGVLLHT 253
H+ C HT+G Q + R S C+E RR + S ++A +G
Sbjct: 18 HRAAQCTHTDGPLQMIRRKGRPSTTCGHCKELRRTKNFNPSGGCMCASARRPAVGSKEDE 77

Query: 254 LRWNSLIGRAGECSRC*HGKPCNC 325
R RC G+PC C
Sbjct: 78 TR-----------CRCDEGEPCKC 90


tr_hit_id A5E397
Definition tr|A5E397|A5E397_LODEL Putative uncharacterized protein OS=Lodderomyces elongisporus
Align length 70
Score (bit) 33.9
E-value 7.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955551|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_G11, 5'
(593 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5E397|A5E397_LODEL Putative uncharacterized protein OS=Lodde... 34 7.2
tr|Q30W54|Q30W54_DESDG Tyrosine-specific transport protein OS=De... 33 9.4
tr|B0UE93|B0UE93_METS4 Putative uncharacterized protein OS=Methy... 33 9.4

>tr|A5E397|A5E397_LODEL Putative uncharacterized protein
OS=Lodderomyces elongisporus GN=LELG_04084 PE=4 SV=1
Length = 1015

Score = 33.9 bits (76), Expect = 7.2
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -1

Query: 431 KVGGRGPANCYRLMTSVSY----PESQPAADRFAPAQPENSCRACHVSTWNTLQLCQSES 264
+ G GP CYRL T Y P S P R A +A H+ST+ + ++
Sbjct: 753 RAGRTGPGKCYRLYTESIYSKLAPSSTPEIRRRNLASSVLMLKAMHLSTFEWMDPPSMQA 812

Query: 263 STSAYVTVRQ 234
+AY ++Q
Sbjct: 813 VNAAYKQLKQ 822


>tr|Q30W54|Q30W54_DESDG Tyrosine-specific transport protein
OS=Desulfovibrio desulfuricans (strain G20) GN=Dde_3298
PE=4 SV=1
Length = 388

Score = 33.5 bits (75), Expect = 9.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3

Query: 579 QLYRHSPTTILLLTVFLPCVMCWKLTR 499
Q H+ + +L VFLPC M WKL R
Sbjct: 330 QALAHAGAALTILAVFLPCAMAWKLRR 356


>tr|B0UE93|B0UE93_METS4 Putative uncharacterized protein
OS=Methylobacterium sp. (strain 4-46) GN=M446_0203 PE=4
SV=1
Length = 310

Score = 33.5 bits (75), Expect = 9.4
Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Frame = -1

Query: 512 GNLHAAFNLWRFSKLRCHLHRPSAVTVKVG--GRGPANCYRLMTSVSYPESQPAADRFAP 339
G + A F WR C+ H + +TV +G R P N Y +++ + + +
Sbjct: 197 GMVPAPFGAWRCILAACNTHGHTGITVGLGRWARDPDNGYDVLSISMEAREEATSPMRSG 256

Query: 338 AQPENSCRACHVSTWNTLQLCQSESSTSAYVTVRQSPPSQQLKFSSCS 195
A H S W T + + A + SP + +++ S CS
Sbjct: 257 AGLSTRAAGRHPSPWAT-----GSTRSRAPSSPSSSPTAARIRISRCS 299