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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955565
Clone id TST39A01NGRL0023_H02
Library
Length 628
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_H02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
TCGAAACTCGTCGGGCACATACCCTTCTCCCCCCTCTCTCTGTCTCTCTCTTTCTTGATC
GCCTGACTCCCTCTCTCGAGCCTCGGGAGTTCTTTGCAGGGCAGCTGACGATTGTGGGAT
GAGAGCAGTATCGTCGATTGAGGCCCCCATTTTTTCCCCACTTCTCAAGCAATACCAACG
TTTCATACCTTGTCTGAAGCAGAAGCAAAACTTAACGACGAGGGTCTCATACAGACTTGT
AGAAGGGCCTGCACATTGTTATCGAGGTTCTACTCAAGATTCTACAATAGAATAGGCCTT
GTTTAGATGGCCTTCTTCTGCCAGAAGGTGGCCATTGTTTCTGCTGTCTTTCTTCTTTAT
ACCTCCCTTTTGCAACCTGGTTTCTGCGATGAGACGACAAGCGATGATGATCGTGCCCCT
AAGCAACCTGGTTGTGACAATGTTTTCCAGCTGGTCAAAGTGCAGTACTTTCTGGATGGG
CAATTCCTCAAGGAAGTAGTAGGATTGACAGCCAGGTTTGGGGCCCTTGTACCGAGGTCG
GAAAAAGAGGAAATCAAGGCACCATTAGTCCTCACAGATCCCTTGGATGGCTGCTCCAAT
TTCTCTACGCAGCTGATTGGCTCTATAG
■■Homology search results ■■ -
sp_hit_id Q803A8
Definition sp|Q803A8|WWOX_DANRE WW domain-containing oxidoreductase OS=Danio rerio
Align length 65
Score (bit) 32.7
E-value 1.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955565|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_H02, 5'
         (628 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q803A8|WWOX_DANRE WW domain-containing oxidoreductase OS=Dani...    33   1.6  
sp|Q9EPL0|XYLT2_MOUSE Xylosyltransferase 2 OS=Mus musculus GN=Xy...    30   7.7  

>sp|Q803A8|WWOX_DANRE WW domain-containing oxidoreductase OS=Danio
           rerio GN=wwox PE=2 SV=1
          Length = 412

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +1

Query: 424 QPGCDNVFQLVKVQYFLDGQFLKEVVGLTARFGALVPRSEKEEIKAPLVLTDPLDGCSNF 603
           + G ++ FQ+  + +FL  Q L++V+ L+A    +V  SE          TD LD C N 
Sbjct: 219 EDGFESTFQICHLGHFLLVQLLQDVLRLSAPARVVVVSSESHR------FTDLLDSCGNL 272

Query: 604 STQLI 618
              L+
Sbjct: 273 DLDLL 277


>sp|Q9EPL0|XYLT2_MOUSE Xylosyltransferase 2 OS=Mus musculus GN=Xylt2
           PE=2 SV=3
          Length = 865

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
 Frame = -3

Query: 605 EKLEQPSKGSVRTNGALISSFSD-----LGTRAPNLAVNPTTSLRNCPSRKYCTLTSWKT 441
           E LE+ ++      G+ + +++D       + A   A+ P+     CPS + C LTSW +
Sbjct: 791 EALEEAARRHTELTGSALEAWTDGELSNFWSVAGLCAIGPSA----CPSLELCRLTSWSS 846

Query: 440 LS 435
           LS
Sbjct: 847 LS 848
tr_hit_id B8LL80
Definition tr|B8LL80|B8LL80_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 92
Score (bit) 84.0
E-value 7.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955565|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_H02, 5'
         (628 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LL80|B8LL80_PICSI Putative uncharacterized protein OS=Picea...    84   7e-15
tr|A7Q9P4|A7Q9P4_VITVI Chromosome chr5 scaffold_67, whole genome...    81   6e-14
tr|Q9MA44|Q9MA44_ARATH T20M3.9 protein (Signal peptide peptidase...    77   1e-12
tr|B3H5D5|B3H5D5_ARATH Uncharacterized protein At1g05820.2 OS=Ar...    77   1e-12
tr|Q53P98|Q53P98_ORYSJ Signal peptide peptidase family protein, ...    75   3e-12
tr|B8BKA5|B8BKA5_ORYSI Putative uncharacterized protein OS=Oryza...    75   3e-12
tr|A3CAX6|A3CAX6_ORYSJ Putative uncharacterized protein OS=Oryza...    75   3e-12
tr|A9P7Y0|A9P7Y0_POPTR Putative uncharacterized protein OS=Popul...    73   1e-11
tr|A9RBH3|A9RBH3_PHYPA Predicted protein OS=Physcomitrella paten...    72   3e-11
tr|Q945B9|Q945B9_EUPES Growth-on protein GRO11 OS=Euphorbia esul...    70   1e-10
tr|B8A355|B8A355_MAIZE Putative uncharacterized protein OS=Zea m...    70   1e-10
tr|A7QIX9|A7QIX9_VITVI Chromosome chr2 scaffold_105, whole genom...    70   1e-10
tr|Q2PEQ9|Q2PEQ9_TRIPR Putative uncharacterized protein OS=Trifo...    69   2e-10
tr|A7PZH1|A7PZH1_VITVI Chromosome chr15 scaffold_40, whole genom...    69   2e-10
tr|Q8LCK4|Q8LCK4_ARATH Growth-on protein GRO10 OS=Arabidopsis th...    68   4e-10
tr|Q9CAD4|Q9CAD4_ARATH Putative uncharacterized protein F24D7.12...    67   9e-10
tr|Q8W469|Q8W469_ARATH Putative uncharacterized protein At1g6369...    67   9e-10
tr|Q3ECJ2|Q3ECJ2_ARATH Uncharacterized protein At1g63690.2 OS=Ar...    67   9e-10
tr|Q9ZW87|Q9ZW87_ARATH Putative uncharacterized protein At2g4310...    66   1e-09
tr|Q945B8|Q945B8_EUPES Growth-on protein GRO10 OS=Euphorbia esul...    66   1e-09
tr|Q4V3B8|Q4V3B8_ARATH At2g43070 (Putative uncharacterized prote...    66   1e-09
tr|Q5Z413|Q5Z413_ORYSJ Os06g0730900 protein OS=Oryza sativa subs...    66   2e-09
tr|B8B2X8|B8B2X8_ORYSI Putative uncharacterized protein OS=Oryza...    66   2e-09
tr|B8A851|B8A851_ORYSI Putative uncharacterized protein OS=Oryza...    65   3e-09
tr|A5C9N5|A5C9N5_VITVI Putative uncharacterized protein OS=Vitis...    65   3e-09
tr|Q5N808|Q5N808_ORYSJ cDNA clone:J023010L21, full insert sequen...    65   3e-09
tr|Q0VJA9|Q0VJA9_PLAAC D-alanyl-D-alanine endopeptidase/peptidas...    65   3e-09
tr|A3A0V5|A3A0V5_ORYSJ Putative uncharacterized protein OS=Oryza...    65   3e-09
tr|A9SPU9|A9SPU9_PHYPA Predicted protein OS=Physcomitrella paten...    65   4e-09
tr|Q6K9X7|Q6K9X7_ORYSJ Putative growth-on protein GRO10 OS=Oryza...    64   1e-08

>tr|B8LL80|B8LL80_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 539

 Score = 84.0 bits (206), Expect = 7e-15
 Identities = 46/92 (50%), Positives = 59/92 (64%)
 Frame = +1

Query: 346 VFLLYTSLLQPGFCDETTSDDDRAPKQPGCDNVFQLVKVQYFLDGQFLKEVVGLTARFGA 525
           +FLL   L Q    DE + DD  APK PGC N+FQLVKV+ ++DG     +VGL+ARFG 
Sbjct: 15  LFLLLV-LCQHCLSDEISHDDSSAPKSPGCKNIFQLVKVKNWIDGVEGTSMVGLSARFGT 73

Query: 526 LVPRSEKEEIKAPLVLTDPLDGCSNFSTQLIG 621
            VP +E E  +  +V T+PL+ C N STQL G
Sbjct: 74  SVPTNEDEAHRMTVVETNPLNCCENSSTQLSG 105


>tr|A7Q9P4|A7Q9P4_VITVI Chromosome chr5 scaffold_67, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00033565001
           PE=4 SV=1
          Length = 533

 Score = 80.9 bits (198), Expect = 6e-14
 Identities = 40/96 (41%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
 Frame = +1

Query: 343 AVFLLYTSLLQP-GFCDETTSDDDRAPKQPGCDNVFQLVKVQYFLDGQFLKEVVGLTARF 519
           A+ LL+  +  P    D+ +  DD  PK P C+N FQLVKV+ ++DG+  + +VGLTARF
Sbjct: 8   AIPLLFLLVALPLAAADDASDQDDSGPKSPFCNNTFQLVKVKNWVDGKEHESLVGLTARF 67

Query: 520 GALVPRSEKEEIKAPLVLTDPLDGCSNFSTQLIGSI 627
           GA +P    + ++ P V ++P++ CS+ S++L GSI
Sbjct: 68  GASLPTEAHDHLRLPAVFSNPMNCCSDSSSELSGSI 103


>tr|Q9MA44|Q9MA44_ARATH T20M3.9 protein (Signal peptide peptidase)
           OS=Arabidopsis thaliana GN=SPP PE=2 SV=1
          Length = 536

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 40/105 (38%), Positives = 65/105 (61%)
 Frame = +1

Query: 313 FFCQKVAIVSAVFLLYTSLLQPGFCDETTSDDDRAPKQPGCDNVFQLVKVQYFLDGQFLK 492
           F C+ +A  +A++L+   LL    C    + D  APK PGC N FQ+VKV+ +++G+  +
Sbjct: 6   FTCRLLAAAAALYLI--GLL----CVGADTKDVTAPKIPGCSNEFQMVKVENWVNGENGE 59

Query: 493 EVVGLTARFGALVPRSEKEEIKAPLVLTDPLDGCSNFSTQLIGSI 627
               +TA+FG ++P  + + +K P+ LT PLD CSN +++L  SI
Sbjct: 60  TFTAMTAQFGTMLPSDKDKAVKLPVALTTPLDSCSNLTSKLSWSI 104


>tr|B3H5D5|B3H5D5_ARATH Uncharacterized protein At1g05820.2
           OS=Arabidopsis thaliana GN=At1g05820 PE=4 SV=1
          Length = 507

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 40/105 (38%), Positives = 65/105 (61%)
 Frame = +1

Query: 313 FFCQKVAIVSAVFLLYTSLLQPGFCDETTSDDDRAPKQPGCDNVFQLVKVQYFLDGQFLK 492
           F C+ +A  +A++L+   LL    C    + D  APK PGC N FQ+VKV+ +++G+  +
Sbjct: 6   FTCRLLAAAAALYLI--GLL----CVGADTKDVTAPKIPGCSNEFQMVKVENWVNGENGE 59

Query: 493 EVVGLTARFGALVPRSEKEEIKAPLVLTDPLDGCSNFSTQLIGSI 627
               +TA+FG ++P  + + +K P+ LT PLD CSN +++L  SI
Sbjct: 60  TFTAMTAQFGTMLPSDKDKAVKLPVALTTPLDSCSNLTSKLSWSI 104


>tr|Q53P98|Q53P98_ORYSJ Signal peptide peptidase family protein,
           expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os11g24540 PE=4 SV=1
          Length = 534

 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 45/97 (46%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
 Frame = +1

Query: 340 SAVFLLYTSLLQPGFCDETTSDDDRA-PKQPGCDNVFQLVKVQYFLDGQFLKEVVGLTAR 516
           +A  LL   L      D+ +SDDD   P  PGC N FQLVKV+ +++G     VVGL+AR
Sbjct: 12  AAAVLLLVLLAGGSAADDASSDDDAGVPPSPGCSNKFQLVKVKNWVNGTEGTIVVGLSAR 71

Query: 517 FGALVPRSEKEEIKAPLVLTDPLDGCSNFSTQLIGSI 627
           FGA VPR   E  K   VL +PLD CSN +++L   I
Sbjct: 72  FGASVPRDIHEAQKTFAVLANPLDCCSNSTSKLTNYI 108


>tr|B8BKA5|B8BKA5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_35966 PE=4 SV=1
          Length = 534

 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 45/97 (46%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
 Frame = +1

Query: 340 SAVFLLYTSLLQPGFCDETTSDDDRA-PKQPGCDNVFQLVKVQYFLDGQFLKEVVGLTAR 516
           +A  LL   L      D+ +SDDD   P  PGC N FQLVKV+ +++G     VVGL+AR
Sbjct: 12  AAAVLLLVLLAGGSAADDASSDDDAGVPPSPGCSNKFQLVKVKNWVNGTEGTIVVGLSAR 71

Query: 517 FGALVPRSEKEEIKAPLVLTDPLDGCSNFSTQLIGSI 627
           FGA VPR   E  K   VL +PLD CSN +++L   I
Sbjct: 72  FGASVPRDIHEAQKTFAVLANPLDCCSNSTSKLTNYI 108


>tr|A3CAX6|A3CAX6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_032448 PE=4 SV=1
          Length = 470

 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 45/97 (46%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
 Frame = +1

Query: 340 SAVFLLYTSLLQPGFCDETTSDDDRA-PKQPGCDNVFQLVKVQYFLDGQFLKEVVGLTAR 516
           +A  LL   L      D+ +SDDD   P  PGC N FQLVKV+ +++G     VVGL+AR
Sbjct: 12  AAAVLLLVLLAGGSAADDASSDDDAGVPPSPGCSNKFQLVKVKNWVNGTEGTIVVGLSAR 71

Query: 517 FGALVPRSEKEEIKAPLVLTDPLDGCSNFSTQLIGSI 627
           FGA VPR   E  K   VL +PLD CSN +++L   I
Sbjct: 72  FGASVPRDIHEAQKTFAVLANPLDCCSNSTSKLTNYI 108


>tr|A9P7Y0|A9P7Y0_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 540

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 41/103 (39%), Positives = 60/103 (58%)
 Frame = +1

Query: 319 CQKVAIVSAVFLLYTSLLQPGFCDETTSDDDRAPKQPGCDNVFQLVKVQYFLDGQFLKEV 498
           C   A++   FL    L    F +E + D D +PK PGCD+ + LVKV+ +  G   +  
Sbjct: 12  CSLHAVLLFSFLFLIGL---SFAEEASHDGD-SPKFPGCDHPYNLVKVKNWAHGVEGETF 67

Query: 499 VGLTARFGALVPRSEKEEIKAPLVLTDPLDGCSNFSTQLIGSI 627
            G+TARFGA +P+ EK   +   V ++PL+GCS  S++L GSI
Sbjct: 68  AGITARFGAFLPKEEKNSYRLTAVFSNPLNGCSPSSSKLSGSI 110


>tr|A9RBH3|A9RBH3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_110887 PE=4 SV=1
          Length = 552

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 36/92 (39%), Positives = 54/92 (58%)
 Frame = +1

Query: 346 VFLLYTSLLQPGFCDETTSDDDRAPKQPGCDNVFQLVKVQYFLDGQFLKEVVGLTARFGA 525
           + L+   ++QP   D+   DD  AP QPGC N F LVK++ ++ G+   E+VG++ARFG 
Sbjct: 22  LLLVSCLVVQPCQADDIVHDDTLAPSQPGCSNSFVLVKIRTWIKGEEDSEIVGVSARFGK 81

Query: 526 LVPRSEKEEIKAPLVLTDPLDGCSNFSTQLIG 621
           L+   E+ +   PL   DP DGC++    L G
Sbjct: 82  LIADHEQGKTSVPLSKLDPEDGCTDSIKPLQG 113


>tr|Q945B9|Q945B9_EUPES Growth-on protein GRO11 OS=Euphorbia esula
           GN=Gro11 PE=2 SV=1
          Length = 538

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
 Frame = +1

Query: 355 LYTSLLQPGFCDETTSD----DDRAPKQPGCDNVFQLVKVQYFLDGQFLKEVVGLTARFG 522
           LY +LL    C  +  D    DD++PK+PGCDN F LVKV  ++DG    E VG+ ARFG
Sbjct: 9   LYLALLASSLCFASAGDIVHQDDKSPKRPGCDNNFVLVKVPTWVDGVEDIEYVGVGARFG 68

Query: 523 ALVPRSEKEEIKAPLVLTDPLDGC 594
             +   EK+  K  LVL DP D C
Sbjct: 69  RTLEAKEKDANKTKLVLADPPDLC 92