DK955578 |
Clone id |
TST39A01NGRL0023_H17 |
Library |
TST39 |
Length |
620 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_H17. 5' end sequence. |
Accession |
DK955578 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
TGTGGCTCCAGATACAAATGAATTCACCACCCTCCCTTATCGTGAAGCTTGGCCATCCAA GCTAGGAAGCATCGGCGCCATCTAGGAAGATGGCCCCTGCAGTGACGTCCACTACAGCCT CATGCGTTCTTTCCTCATCACATACGCACCAACAGTCAGGGCTGCATCGCAATCACCACA TTCAGCATCAACCTCTTCACAGCAATGTAGTTCTCGCTCATGCAAAACACAATTGCAGCT GCGTAAAGGATACCTCCATAGTTGGCAGAATCGCACAGGTGCATGGGACTCACCATATTA ATAAAGAGATGGCTTCTCTCGCTCGTGCCCACGTTTCAGGAAGGCGCTGTCGGCATCACG AGTATTTTCAGCAAGATTATAACGGGACTAAACTCTGCCATTTTGTGTCTCACCGTGGAG TAGCACCTATTGGCAGTTTACATGGAAGAAGCAGTCTCTGTTTTCATGAGAGCAACAAGA TGGATTTTGTGCCCTCCACAACAATCTTAGATAGAACCTGGGCTATCTCAAAGAGAAGAA GGCAGTACAGAATCTTGGCTGTGTCAGCTGATGCATCAATGCAAACATCAAAGAACAAGG ATGTTGCCATTCTGTGGTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q10437 |
Definition |
sp|Q10437|YDE3_SCHPO Uncharacterized WD repeat-containing protein C12B10.03 OS=Schizosaccharomyces pombe |
Align length |
105 |
Score (bit) |
38.1 |
E-value |
0.037 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4JAJ3 |
Definition |
tr|B4JAJ3|B4JAJ3_DROGR GH10850 OS=Drosophila grimshawi |
Align length |
112 |
Score (bit) |
42.7 |
E-value |
0.017 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955578|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_H17, 5' (620 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4JAJ3|B4JAJ3_DROGR GH10850 OS=Drosophila grimshawi GN=GH1085... 43 0.017 tr|Q7PXD0|Q7PXD0_ANOGA AGAP001344-PA OS=Anopheles gambiae GN=AGA... 39 0.32 tr|B4QVR0|B4QVR0_DROSI GD19157 OS=Drosophila simulans GN=GD19157... 37 0.94 tr|B4PUS6|B4PUS6_DROYA GE10131 OS=Drosophila yakuba GN=GE10131 P... 37 0.94 tr|B4NJG6|B4NJG6_DROWI GK13853 OS=Drosophila willistoni GN=GK138... 37 1.2 tr|B4IBI1|B4IBI1_DROSE GM15231 OS=Drosophila sechellia GN=GM1523... 37 1.2 tr|A8JNW4|A8JNW4_DROME Skuld, isoform E OS=Drosophila melanogast... 37 1.2 tr|B4JUY6|B4JUY6_DROGR GH14791 OS=Drosophila grimshawi GN=GH1479... 36 1.6 tr|A4QYP6|A4QYP6_MAGGR Predicted protein OS=Magnaporthe grisea G... 36 2.1 tr|Q5DWS8|Q5DWS8_9DINO Photosystem II CP43 protein (Fragment) OS... 35 2.7 tr|B4JSR6|B4JSR6_DROGR GH22853 OS=Drosophila grimshawi GN=GH2285... 35 2.7 tr|B0XAA8|B0XAA8_CULQU 40S ribosomal protein S14 OS=Culex quinqu... 35 2.7 tr|A3LXR2|A3LXR2_PICST Transporter of Nicotinic Acid OS=Pichia s... 35 2.7 tr|A7PNJ2|A7PNJ2_VITVI Chromosome chr1 scaffold_22, whole genome... 35 3.6 tr|A5BYD2|A5BYD2_VITVI Putative uncharacterized protein OS=Vitis... 35 3.6 tr|Q9V4D8|Q9V4D8_DROME Thd1 OS=Drosophila melanogaster GN=Thd1 P... 35 3.6 tr|B7Z0X0|B7Z0X0_DROME CG42265, isoform B OS=Drosophila melanoga... 35 3.6 tr|B7Z0W9|B7Z0W9_DROME CG42265, isoform A OS=Drosophila melanoga... 35 3.6 tr|B4N9P1|B4N9P1_DROWI GK11475 OS=Drosophila willistoni GN=GK114... 35 3.6 tr|B0WMI9|B0WMI9_CULQU Putative uncharacterized protein OS=Culex... 35 3.6 tr|Q5A896|Q5A896_CANAL Putative uncharacterized protein TNA12 OS... 35 3.6 tr|B4RT34|B4RT34_ALTMD Acyl-CoA dehydrogenase, C-terminal:Acyl-C... 35 4.7 tr|Q7Q0W4|Q7Q0W4_ANOGA Cuticular protein 92, RR-2 family (AGAP01... 35 4.7 tr|B4JP41|B4JP41_DROGR GH13864 OS=Drosophila grimshawi GN=GH1386... 35 4.7 tr|A0NG15|A0NG15_ANOGA AGAP010112-PB OS=Anopheles gambiae GN=CPR... 35 4.7 tr|Q9VKG3|Q9VKG3_DROME Mst33A, isoform A OS=Drosophila melanogas... 34 6.1 tr|Q9U5W5|Q9U5W5_DROME MST33A protein OS=Drosophila melanogaster... 34 6.1 tr|B4QJL8|B4QJL8_DROSI GD12147 OS=Drosophila simulans GN=GD12147... 34 6.1 tr|B4LJL2|B4LJL2_DROVI GJ20233 OS=Drosophila virilis GN=GJ20233 ... 34 6.1 tr|B4JVL4|B4JVL4_DROGR GH23145 OS=Drosophila grimshawi GN=GH2314... 34 6.1
>tr|B4JAJ3|B4JAJ3_DROGR GH10850 OS=Drosophila grimshawi GN=GH10850 PE=4 SV=1 Length = 1161
Score = 42.7 bits (99), Expect = 0.017 Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 4/112 (3%) Frame = +3
Query: 102 VTSTTASCVLSSSHTHQQSGLHRNHH----IQHQPLHSNVVLAHAKHNCSCVKDTSIVGR 269 VT+TTA+ +++ +G H NHH +H H + +H +HN + TS Sbjct: 312 VTTTTATSAAAAAAAESSAGHHHNHHHHHNHRHHHQHQQTLQSHQQHNQHLLLPTSSQDT 371
Query: 270 IAQVHGTHHINKEMASLARAHVSGRRCRHHEYFQQDYNGTKLCHFVSHRGVA 425 + +H ++ +++LA A V+ +F D N + L + H VA Sbjct: 372 LL----SHEEDQLISNLADAAVTHSELFSDLFFPSDSNNSLLSPALEHHSVA 419
>tr|Q7PXD0|Q7PXD0_ANOGA AGAP001344-PA OS=Anopheles gambiae GN=AGAP001344 PE=4 SV=4 Length = 604
Score = 38.5 bits (88), Expect = 0.32 Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 2/101 (1%) Frame = +3
Query: 93 APAVTSTTASCVLSSSHTHQQS--GLHRNHHIQHQPLHSNVVLAHAKHNCSCVKDTSIVG 266 +P +TS++++ ++++ S LH++ H QH LH + H +H S G Sbjct: 335 SPRITSSSSTATAAATNATAASVLSLHQSAHHQHTSLHH--LQHHLQHLHSAPGANPADG 392
Query: 267 RIAQVHGTHHINKEMASLARAHVSGRRCRHHEYFQQDYNGT 389 + G HH +AH+ + +H ++ Q +NGT Sbjct: 393 AVTSTDGHHHHPHHQHQ--QAHLQQHQQQHQQHQQHHHNGT 431
>tr|B4QVR0|B4QVR0_DROSI GD19157 OS=Drosophila simulans GN=GD19157 PE=4 SV=1 Length = 231
Score = 37.0 bits (84), Expect = 0.94 Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 1/97 (1%) Frame = +3
Query: 129 LSSSHTHQQSGLHRNHHIQH-QPLHSNVVLAHAKHNCSCVKDTSIVGRIAQVHGTHHINK 305 LS SH H Q L +HH+ H P H H H + + +VHG+HH + Sbjct: 90 LSESHHHHQ--LSESHHLIHGSPQHHY----HGSH-----PHQQLEAPVHEVHGSHHQHP 138
Query: 306 EMASLARAHVSGRRCRHHEYFQQDYNGTKLCHFVSHR 416 AS HH + + Y+GT H + H+ Sbjct: 139 IHASP----------HHHNHLEAPYHGTHGVHHLHHQ 165
>tr|B4PUS6|B4PUS6_DROYA GE10131 OS=Drosophila yakuba GN=GE10131 PE=4 SV=1 Length = 234
Score = 37.0 bits (84), Expect = 0.94 Identities = 27/95 (28%), Positives = 40/95 (42%) Frame = +3
Query: 129 LSSSHTHQQSGLHRNHHIQHQPLHSNVVLAHAKHNCSCVKDTSIVGRIAQVHGTHHINKE 308 LS SH H Q L +HH+ H+ H + H H+ + + G +HG+HH Sbjct: 90 LSESHDHHQ--LSESHHLIHESPHHHY---HGYHHHQ-EPEAPVHG----IHGSHH---- 135
Query: 309 MASLARAHVSGRRCRHHEYFQQDYNGTKLCHFVSH 413 H+ HH + + Y+GT H V H Sbjct: 136 ------QHLIHGSPHHHHHLEAPYHGTHGTHGVHH 164
>tr|B4NJG6|B4NJG6_DROWI GK13853 OS=Drosophila willistoni GN=GK13853 PE=4 SV=1 Length = 582
Score = 36.6 bits (83), Expect = 1.2 Identities = 32/119 (26%), Positives = 45/119 (37%) Frame = +3
Query: 6 LQIQMNSPPSLIVKLGHPS*EASAPSRKMAPAVTSTTASCVLSSSHTHQQSGLHRNHHIQ 185 LQ SP S + LG+ +P +S+ +S L +HQQ LH HH Sbjct: 86 LQSSSLSPSSSALHLGNQLHHQHLSQSSNSPVSSSSPSSSALFQQQSHQQQQLHHQHH-H 144
Query: 186 HQPLHSNVVLAHAKHNCSCVKDTSIVGRIAQVHGTHHINKEMASLARAHVSGRRCRHHE 362 HQ S S + Q+ HINK +A+ A A S + H+ Sbjct: 145 HQQQQSQY---------------SSLSAALQLQQQQHINK-LAAAAAAAASSQGSHAHQ 187
>tr|B4IBI1|B4IBI1_DROSE GM15231 OS=Drosophila sechellia GN=GM15231 PE=4 SV=1 Length = 231
Score = 36.6 bits (83), Expect = 1.2 Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 1/97 (1%) Frame = +3
Query: 129 LSSSHTHQQSGLHRNHHIQH-QPLHSNVVLAHAKHNCSCVKDTSIVGRIAQVHGTHHINK 305 LS SH H Q L +HH+ H P H H H + + +VHG+HH + Sbjct: 90 LSESHHHHQ--LSESHHLIHGSPQHHY----HGSH-----PHQQLEAPVHEVHGSHHQHP 138
Query: 306 EMASLARAHVSGRRCRHHEYFQQDYNGTKLCHFVSHR 416 AS HH + + Y+GT H + H+ Sbjct: 139 IHASP----------HHHNHLKAPYHGTHGVHHLHHQ 165
>tr|A8JNW4|A8JNW4_DROME Skuld, isoform E OS=Drosophila melanogaster GN=skd PE=4 SV=1 Length = 2768
Score = 36.6 bits (83), Expect = 1.2 Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 11/128 (8%) Frame = +3
Query: 105 TSTTASCVLSSSHTHQQSGLHRNHHIQHQPLHSN-----VVLAHAKHNCSCVKDTSIVGR 269 +S+++S SSS ++QQ H+ H Q Q A + H+ S + +TS Sbjct: 608 SSSSSSSSSSSSSSYQQQHYHQQHLQQQQQQRPGTPVLPATAATSSHHSSSLSNTSASNS 667
Query: 270 IAQVHGTHHIN------KEMASLARAHVSGRRCRHHEYFQQDYNGTKLCHFVSHRGVAPI 431 A H++ +AS A + S R ++H D N K H G P Sbjct: 668 SAATPRRHNVPFHKRLLHSLASTASSTASTFRAKNHSNTTTDTNIPK----QRHLGNTPH 723
Query: 432 GSLHGRSS 455 G+ HG +S Sbjct: 724 GTPHGGAS 731
>tr|B4JUY6|B4JUY6_DROGR GH14791 OS=Drosophila grimshawi GN=GH14791 PE=4 SV=1 Length = 385
Score = 36.2 bits (82), Expect = 1.6 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +3
Query: 138 SHTHQQSGLHRNHHIQHQPLHSNVVLAHAKH 230 +HTHQQ L + H QHQ H + L H KH Sbjct: 263 NHTHQQQQLQQQHQHQHQSHHQHHSLKHTKH 293
>tr|A4QYP6|A4QYP6_MAGGR Predicted protein OS=Magnaporthe grisea GN=MGG_07738 PE=4 SV=1 Length = 459
Score = 35.8 bits (81), Expect = 2.1 Identities = 22/61 (36%), Positives = 26/61 (42%) Frame = +3
Query: 69 ASAPSRKMAPAVTSTTASCVLSSSHTHQQSGLHRNHHIQHQPLHSNVVLAHAKHNCSCVK 248 A A S PA TST +S+ H H H +HH H HSN A +N S Sbjct: 201 ARANSTHTRPATTSTATPPSISAHHQH-----HHHHHHHHTDTHSNSNNTAATNNSSVAD 255
Query: 249 D 251 D Sbjct: 256 D 256
>tr|Q5DWS8|Q5DWS8_9DINO Photosystem II CP43 protein (Fragment) OS=Symbiodinium sp. HPiH-2 GN=psbC PE=2 SV=1 Length = 347
Score = 35.4 bits (80), Expect = 2.7 Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 2/103 (1%) Frame = +1
Query: 85 GRWPLQ*RPLQPHAFFPHHIRTNSQGCIAITTFSINL--FTAM*FSLMQNTIXXXXRIPP 258 G W +Q RP A +++ ++ T ++ L FTA FS NT P Sbjct: 202 GCWHIQTRPF---AIVTRAFTWSAEAYLSYTLSAVALCAFTAALFSWYNNTAYPSEFYGP 258
Query: 259 *LAESHRCMGLTILIKRWLLSLVPTFQEGAVGITSIFSKIITG 387 AE+ + T LI+ W L + T EG + + TG Sbjct: 259 TAAEASQAQSFTFLIRDWKLGIKITSSEGPTALGKYLMRSPTG 301
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