DK955579 |
Clone id |
TST39A01NGRL0023_H18 |
Library |
TST39 |
Length |
641 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_H18. 5' end sequence. |
Accession |
DK955579 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1881Contig1 |
Sequence |
CTCACCGTGGAAACCTTTCAAGACGTAAACGAACGCAGTCGAGAACCCTACTCGCAAGAT CTCAGCAAGGCAGGGTAGCCACTCAAGGATAGAAGAAGGCTAGAGTAGGAGCTTCTTTCT CTTCTTCTTTGTTTGAGTAGATAGAGATGGCGGAGGCATCACCTGACCGGGCATATAGTA ACCCGGATTCAGGGTCGGCAGATGACCAATTTGCGCATCAGGCCAACGTAGATTTGCATG AAGAGGAGGAAGAGGAAGAAGAAGTGGAGGAAGAAGAGGAAGAGGAACCTCTGAACATCG AGAACAATGAAGATGCACAGAAGCCCTCCTTAGACATGGCAGTTAAGGAACCCACCAGCA GTAAAGCCGCCTCAGGCTCAGGGAAAATTTTCATTGGAGGCCTTGCAGGAGAGACTACAA CAGAAAAACTAACAAAGCATTTTAGGAAGTATGGCGAAATTATTGATTCAGTCATCATGC GAAATCGTGTCACGGGGCATACTCGTGGGTTTGGGTTTGTCACTTATGCGGATCCTTCTG TATGTGAGCGTGTCTTACAGGACAAGCATGTTCTGGATGGAAAGACGGTTGAGATCNAGA GGTCGATACCTCGAGAGAAGATGGTGAAGGGACCTCGAACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O94432 |
Definition |
sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe |
Align length |
115 |
Score (bit) |
88.6 |
E-value |
3.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955579|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_H18, 5' (641 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15... 89 3e-17 sp|P48809|RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27... 87 6e-17 sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein ... 84 6e-16 sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus G... 80 7e-15 sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=H... 80 1e-14 sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens G... 80 1e-14 sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=M... 79 2e-14 sp|Q02926|RB97D_DROME Ribonucleoprotein RB97D OS=Drosophila mela... 77 6e-14 sp|Q6URK4|ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 OS... 76 1e-13 sp|Q8BG05|ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 ... 76 1e-13 sp|P51991|ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 ... 76 1e-13 sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis... 76 1e-13 sp|P07909|ROA1_DROME Heterogeneous nuclear ribonucleoprotein A1 ... 75 2e-13 sp|Q22037|ROA1_CAEEL Heterogeneous nuclear ribonucleoprotein A1 ... 75 3e-13 sp|Q5ZI72|HNRDL_CHICK Heterogeneous nuclear ribonucleoprotein D-... 75 4e-13 sp|P48810|RB87F_DROME Heterogeneous nuclear ribonucleoprotein 87... 74 8e-13 sp|Q640A2|HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-... 74 8e-13 sp|Q9Z130|HNRDL_MOUSE Heterogeneous nuclear ribonucleoprotein D-... 74 8e-13 sp|O14979|HNRDL_HUMAN Heterogeneous nuclear ribonucleoprotein D-... 74 8e-13 sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B... 73 1e-12 sp|Q8K3P4|MSI1H_RAT RNA-binding protein Musashi homolog 1 OS=Rat... 73 1e-12 sp|Q61474|MSI1H_MOUSE RNA-binding protein Musashi homolog 1 OS=M... 73 1e-12 sp|O43347|MSI1H_HUMAN RNA-binding protein Musashi homolog 1 OS=H... 73 1e-12 sp|P04256|ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 OS... 72 2e-12 sp|A5A6H4|ROA1_PANTR Heterogeneous nuclear ribonucleoprotein A1 ... 72 2e-12 sp|P49312|ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 ... 72 2e-12 sp|Q28521|ROA1_MACMU Heterogeneous nuclear ribonucleoprotein A1 ... 72 2e-12 sp|P09651|ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 ... 72 2e-12 sp|P09867|ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 ... 72 2e-12 sp|P0C7M2|RA1L3_HUMAN Putative heterogeneous nuclear ribonucleop... 72 2e-12
>sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1 Length = 474
Score = 88.6 bits (218), Expect = 3e-17 Identities = 44/115 (38%), Positives = 68/115 (59%), Gaps = 3/115 (2%) Frame = +3
Query: 294 NIENNEDAQKPSLDMAVKEPTSSKAASGS---GKIFIGGLAGETTTEKLTKHFRKYGEII 464 N N+ A S M E + + + + GK+FIGGL ETT + L +F ++GE++ Sbjct: 131 NYNENQSALTGSGAMESNEDNAEETSPFNREDGKMFIGGLNWETTDDSLRDYFEQFGEVL 190
Query: 465 DSVIMRNRVTGHTRGFGFVTYADPSVCERVLQDKHVLDGKTVEIXRSIPREKMVK 629 D +MR+ TG +RGFGF+T+ +P V+ +H LDGK ++ R+IPRE+ K Sbjct: 191 DCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSKEHHLDGKIIDPKRAIPREEQEK 245
Score = 69.7 bits (169), Expect = 1e-11 Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 1/83 (1%) Frame = +3
Query: 378 SGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYADPSVCERVL 557 + K+F+GG+ G+ T E+ F ++G ++D+ +M ++ TG RGFGFVTY + S E + Sbjct: 246 TAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATM 305
Query: 558 QDKHV-LDGKTVEIXRSIPREKM 623 ++ + GK VE+ R+ P+ + Sbjct: 306 SQPYITIHGKPVEVKRATPKASL 328
>sp|P48809|RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster GN=Hrb27C PE=1 SV=2 Length = 421
Score = 87.4 bits (215), Expect = 6e-17 Identities = 43/87 (49%), Positives = 63/87 (72%), Gaps = 3/87 (3%) Frame = +3
Query: 381 GKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYADPSVCERVLQ 560 GK+F+GGL+ ETT E L+++F ++G+IID V+M+N +G +RGFGFVT+ADP+ VLQ Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Query: 561 D-KHVLDGKTVEIXRSIPR--EKMVKG 632 + H LDG+T++ PR +K KG Sbjct: 67 NGPHTLDGRTIDPKPCNPRTLQKPKKG 93
Score = 63.5 bits (153), Expect = 9e-10 Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 2/90 (2%) Frame = +3
Query: 354 TSSKAASGSG-KIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYA 530 T K G G K+F+GGL T L F +YG++ + VIM ++ +RGFGF+++ Sbjct: 86 TLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFE 145
Query: 531 DPSVCERVLQDKHV-LDGKTVEIXRSIPRE 617 + S E V ++++ L+GK VEI ++ PR+ Sbjct: 146 EESSVEHVTNERYINLNGKQVEIKKAEPRD 175
>sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae GN=HRP1 PE=1 SV=1 Length = 534
Score = 84.0 bits (206), Expect = 6e-16 Identities = 38/95 (40%), Positives = 64/95 (67%) Frame = +3
Query: 345 KEPTSSKAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVT 524 +E + + + S K+FIGGL +TT + L ++F KYG + D IM++ TG +RGFGF++ Sbjct: 147 EERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLS 206
Query: 525 YADPSVCERVLQDKHVLDGKTVEIXRSIPREKMVK 629 + PS + V++ +H+LDGK ++ R+IPR++ K Sbjct: 207 FEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQDK 241
Score = 66.2 bits (160), Expect = 1e-10 Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%) Frame = +3
Query: 378 SGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYADPSVCERVL 557 +GKIF+GG+ + ++ + F ++G IID+ +M ++ TG +RGFGFVTY +RV Sbjct: 242 TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVC 301
Query: 558 QDKHV-LDGKTVEIXRSIPREKMVK 629 Q+K + + +EI R+ PR K Sbjct: 302 QNKFIDFKDRKIEIKRAEPRHMQQK 326
>sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2 SV=2 Length = 406
Score = 80.5 bits (197), Expect = 7e-15 Identities = 42/106 (39%), Positives = 62/106 (58%), Gaps = 11/106 (10%) Frame = +3
Query: 357 SSKAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYADP 536 +S A GK+F+GGL TT E L +F +YGE++D VIM+++ T +RGFGFV + DP Sbjct: 2 NSAGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDP 61
Query: 537 SVCERVLQDK-HVLDGKTV----------EIXRSIPREKMVKGPRT 641 + VL + H LDG+ + + R+ P+E KGPR+ Sbjct: 62 NCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRS 107
Score = 58.2 bits (139), Expect = 4e-08 Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 1/90 (1%) Frame = +3
Query: 369 ASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYAD-PSVC 545 +S S KIF+GG+ +L ++F+K+G + + V++ + RGFGF+T+ D SV Sbjct: 109 SSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVD 168
Query: 546 ERVLQDKHVLDGKTVEIXRSIPREKMVKGP 635 + V H + GK VE+ R+ PR+ + P Sbjct: 169 QAVNMHFHDIMGKKVEVKRAEPRDSKNQAP 198
>sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1 Length = 328
Score = 79.7 bits (195), Expect = 1e-14 Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 9/103 (8%) Frame = +3
Query: 348 EPTSSKAASGS--------GKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHT 503 E S+ SGS GK+FIGGL+ +T+ + L +F K+GEI + ++MR+ T + Sbjct: 2 EANGSQGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRS 61
Query: 504 RGFGFVTYADPSVCERVL-QDKHVLDGKTVEIXRSIPREKMVK 629 RGFGFVT+ADP+ ++VL Q H LD KT++ + PR K Sbjct: 62 RGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPK 104
Score = 66.2 bits (160), Expect = 1e-10 Identities = 31/88 (35%), Positives = 56/88 (63%), Gaps = 1/88 (1%) Frame = +3
Query: 363 KAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYADPSV 542 K + + KIF+GGL+ T E + ++F ++G++ D+++M ++ T RGFGFVT+ + V Sbjct: 104 KMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDV 163
Query: 543 CERVLQ-DKHVLDGKTVEIXRSIPREKM 623 E+V + H ++ K VE ++ P+E M Sbjct: 164 VEKVCEIHFHEINNKMVECKKAQPKEVM 191
>sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1 Length = 407
Score = 79.7 bits (195), Expect = 1e-14 Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 11/106 (10%) Frame = +3
Query: 357 SSKAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYADP 536 ++ A GK+F+GGL TT E L +F +YGE++D VIM+++ T +RGFGFV + DP Sbjct: 2 NNSGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDP 61
Query: 537 SVCERVLQDK-HVLDGKTV----------EIXRSIPREKMVKGPRT 641 + VL + H LDG+ + + R+ P+E KGPR+ Sbjct: 62 NCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRS 107
Score = 58.2 bits (139), Expect = 4e-08 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%) Frame = +3
Query: 372 SGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYAD-PSVCE 548 S S KIF+GG+ +L ++F+K+G + + V++ + RGFGF+T+ D SV + Sbjct: 110 SKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ 169
Query: 549 RVLQDKHVLDGKTVEIXRSIPREKMVKGP 635 V H + GK VE+ R+ PR+ + P Sbjct: 170 AVNMHFHDIMGKKVEVKRAEPRDSKSQAP 198
>sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1 Length = 346
Score = 79.0 bits (193), Expect = 2e-14 Identities = 42/98 (42%), Positives = 64/98 (65%), Gaps = 5/98 (5%) Frame = +3
Query: 351 PTSSKAASGS----GKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGF 518 P +S +A+ S GK+FIGGL+ +T+ + L +F K+GEI + ++MR+ T +RGFGF Sbjct: 7 PGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGF 66
Query: 519 VTYADPSVCERVL-QDKHVLDGKTVEIXRSIPREKMVK 629 VT+ADP+ ++VL Q H LD KT++ + PR K Sbjct: 67 VTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPK 104
Score = 66.2 bits (160), Expect = 1e-10 Identities = 31/88 (35%), Positives = 56/88 (63%), Gaps = 1/88 (1%) Frame = +3
Query: 363 KAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYADPSV 542 K + + KIF+GGL+ T E + ++F ++G++ D+++M ++ T RGFGFVT+ + V Sbjct: 104 KMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDV 163
Query: 543 CERVLQ-DKHVLDGKTVEIXRSIPREKM 623 E+V + H ++ K VE ++ P+E M Sbjct: 164 VEKVCEIHFHEINNKMVECKKAQPKEVM 191
>sp|Q02926|RB97D_DROME Ribonucleoprotein RB97D OS=Drosophila melanogaster GN=Rb97D PE=1 SV=1 Length = 471
Score = 77.4 bits (189), Expect = 6e-14 Identities = 35/78 (44%), Positives = 55/78 (70%), Gaps = 1/78 (1%) Frame = +3
Query: 384 KIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYADPSVCERVLQD 563 K+FIGGLA TT E L + ++G+++D V+MR+ T +RGFGF+TY + +R ++ Sbjct: 33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQEN 92
Query: 564 K-HVLDGKTVEIXRSIPR 614 + H++DGKTVE R++PR Sbjct: 93 RPHIIDGKTVEAKRALPR 110
Score = 48.9 bits (115), Expect = 2e-05 Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Frame = +3
Query: 384 KIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYAD-PSVCERVLQ 560 K+F+GGL E L ++F ++G ++ ++ ++ TG RGF FV + D +V + +L+ Sbjct: 124 KLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILK 183
Query: 561 DKHVLDGKTVEIXRSI 608 +H + V++ +SI Sbjct: 184 KQHAIKYVHVDVKKSI 199
>sp|Q6URK4|ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus GN=Hnrnpa3 PE=1 SV=1 Length = 379
Score = 76.3 bits (186), Expect = 1e-13 Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 5/87 (5%) Frame = +3
Query: 384 KIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYA-----DPSVCE 548 K+FIGGL+ ETT + L +HF K+G + D V+MR+ T +RGFGFVTY+ D ++C Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 549 RVLQDKHVLDGKTVEIXRSIPREKMVK 629 R H +DG+ VE R++ RE VK Sbjct: 96 R----PHKVDGRVVEPKRAVSREDSVK 118
Score = 64.7 bits (156), Expect = 4e-10 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%) Frame = +3
Query: 288 PLNIENNEDAQKPSLDMAVKEPTSSKAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIID 467 P + ED+ KP + VK KIF+GG+ +T L +F KYG+I Sbjct: 107 PKRAVSREDSVKPGAHLTVK------------KIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 468 SVIMRNRVTGHTRGFGFVTYADPSVCER-VLQDKHVLDGKTVEIXRSIPREKM 623 +M +R +G RGF FVT+ D ++ V+Q H ++G E+ +++ +++M Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 207
>sp|Q8BG05|ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus GN=Hnrnpa3 PE=1 SV=1 Length = 379
Score = 76.3 bits (186), Expect = 1e-13 Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 5/87 (5%) Frame = +3
Query: 384 KIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYA-----DPSVCE 548 K+FIGGL+ ETT + L +HF K+G + D V+MR+ T +RGFGFVTY+ D ++C Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 549 RVLQDKHVLDGKTVEIXRSIPREKMVK 629 R H +DG+ VE R++ RE VK Sbjct: 96 R----PHKVDGRVVEPKRAVSREDSVK 118
Score = 64.7 bits (156), Expect = 4e-10 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%) Frame = +3
Query: 288 PLNIENNEDAQKPSLDMAVKEPTSSKAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIID 467 P + ED+ KP + VK KIF+GG+ +T L +F KYG+I Sbjct: 107 PKRAVSREDSVKPGAHLTVK------------KIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 468 SVIMRNRVTGHTRGFGFVTYADPSVCER-VLQDKHVLDGKTVEIXRSIPREKM 623 +M +R +G RGF FVT+ D ++ V+Q H ++G E+ +++ +++M Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 207
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LPT8 |
Definition |
tr|B8LPT8|B8LPT8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
118 |
Score (bit) |
131.0 |
E-value |
3.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955579|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_H18, 5' (641 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LPT8|B8LPT8_PICSI Putative uncharacterized protein OS=Picea... 131 3e-29 tr|A9NVM3|A9NVM3_PICSI Putative uncharacterized protein OS=Picea... 129 2e-28 tr|A9T3G3|A9T3G3_PHYPA Predicted protein (Fragment) OS=Physcomit... 127 4e-28 tr|A9RJQ3|A9RJQ3_PHYPA Predicted protein (Fragment) OS=Physcomit... 127 4e-28 tr|A9RFC1|A9RFC1_PHYPA Predicted protein (Fragment) OS=Physcomit... 127 8e-28 tr|B8LKC7|B8LKC7_PICSI Putative uncharacterized protein OS=Picea... 121 4e-26 tr|B7ZX91|B7ZX91_MAIZE Putative uncharacterized protein OS=Zea m... 119 1e-25 tr|B4FHJ8|B4FHJ8_MAIZE Putative uncharacterized protein OS=Zea m... 117 5e-25 tr|B4FEN7|B4FEN7_MAIZE Putative uncharacterized protein OS=Zea m... 117 5e-25 tr|A2YE63|A2YE63_ORYSI Putative uncharacterized protein OS=Oryza... 117 5e-25 tr|Q9FM47|Q9FM47_ARATH Similarity to RNA binding protein (Ribonu... 117 6e-25 tr|B6TGB9|B6TGB9_MAIZE Heterogeneous nuclear ribonucleoprotein A... 117 6e-25 tr|Q6YVH4|Q6YVH4_ORYSJ Putative heterogeneous nuclearribonucleop... 116 1e-24 tr|Q6YVH3|Q6YVH3_ORYSJ Os02g0221500 protein OS=Oryza sativa subs... 116 1e-24 tr|A3BCV5|A3BCV5_ORYSJ Putative uncharacterized protein OS=Oryza... 113 9e-24 tr|A7Q2X6|A7Q2X6_VITVI Chromosome chr12 scaffold_47, whole genom... 112 3e-23 tr|Q8W569|Q8W569_ARATH AT4g26650/T15N24_100 OS=Arabidopsis thali... 110 6e-23 tr|A7QH87|A7QH87_VITVI Chromosome chr18 scaffold_96, whole genom... 110 6e-23 tr|A5APB9|A5APB9_VITVI Putative uncharacterized protein (Chromos... 110 7e-23 tr|Q9SU99|Q9SU99_ARATH HnRNP-like protein OS=Arabidopsis thalian... 110 1e-22 tr|A7PM30|A7PM30_VITVI Chromosome chr14 scaffold_21, whole genom... 110 1e-22 tr|A5AKR4|A5AKR4_VITVI Putative uncharacterized protein OS=Vitis... 108 4e-22 tr|Q9LHL2|Q9LHL2_ARATH Similarity to RNA binding protein (Putati... 107 6e-22 tr|Q8W4A6|Q8W4A6_ARATH Putative uncharacterized protein MJH23.3 ... 107 6e-22 tr|Q0WNB9|Q0WNB9_ARATH Putative uncharacterized protein At3g1322... 107 6e-22 tr|A7P0F4|A7P0F4_VITVI Chromosome chr19 scaffold_4, whole genome... 106 1e-21 tr|A5C205|A5C205_VITVI Putative uncharacterized protein OS=Vitis... 106 1e-21 tr|B8A305|B8A305_MAIZE Putative uncharacterized protein OS=Zea m... 105 2e-21 tr|A7NXG9|A7NXG9_VITVI Chromosome chr5 scaffold_2, whole genome ... 104 4e-21 tr|A5BK88|A5BK88_VITVI Putative uncharacterized protein OS=Vitis... 104 4e-21
>tr|B8LPT8|B8LPT8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 411
Score = 131 bits (330), Expect = 3e-29 Identities = 65/118 (55%), Positives = 82/118 (69%), Gaps = 2/118 (1%) Frame = +3
Query: 294 NIENNEDAQKPSLDMAVKEPTSSKA--ASGSGKIFIGGLAGETTTEKLTKHFRKYGEIID 467 ++ +NED + +E K S GKIFIGGL+ TT+ TKHF KYGE+ D Sbjct: 11 DVASNEDGDSEREENVEEEQKQEKNNDVSSPGKIFIGGLSRSTTSSAFTKHFSKYGELTD 70
Query: 468 SVIMRNRVTGHTRGFGFVTYADPSVCERVLQDKHVLDGKTVEIXRSIPREKMVKGPRT 641 SVIM++R+TG RGFGFVTYADPSV ++V+QDKH+LDGKTVEI R+IPR K P+T Sbjct: 71 SVIMKDRLTGQPRGFGFVTYADPSVIDKVIQDKHILDGKTVEIKRTIPRGNSSKAPKT 128
Score = 67.0 bits (162), Expect = 9e-10 Identities = 32/106 (30%), Positives = 61/106 (57%), Gaps = 2/106 (1%) Frame = +3
Query: 312 DAQKPSLDMAVKEPTSSKAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRV 491 D + + + SSKA + K+F+GG+ T ++ +F K+G++++ IM++R Sbjct: 107 DGKTVEIKRTIPRGNSSKAPK-TKKVFVGGIPTSITEDEFKDYFSKFGKVVEHQIMQDRN 165
Query: 492 TGHTRGFGFVTYADPSVCERVLQDKHVLD--GKTVEIXRSIPREKM 623 TG +RGFGF+T+ E ++ +L+ GK VEI ++ P++ + Sbjct: 166 TGRSRGFGFITFETEQAVEEIISQGRMLELGGKQVEIKKAEPKKPL 211
>tr|A9NVM3|A9NVM3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 375
Score = 129 bits (323), Expect = 2e-28 Identities = 62/99 (62%), Positives = 76/99 (76%) Frame = +3
Query: 345 KEPTSSKAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVT 524 K +S+ AS GKIFIGGL+ TTT TKHF KYGE+ DSVIM++R TG RGFGFVT Sbjct: 34 KNNDTSREASSPGKIFIGGLSRSTTTVVFTKHFSKYGELTDSVIMKDRHTGQPRGFGFVT 93
Query: 525 YADPSVCERVLQDKHVLDGKTVEIXRSIPREKMVKGPRT 641 YAD SV ++V++DKH+LDG+TVEI R+IPR KGP+T Sbjct: 94 YADASVVDKVIEDKHILDGRTVEIKRTIPRGNTSKGPKT 132
Score = 63.2 bits (152), Expect = 1e-08 Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 2/80 (2%) Frame = +3
Query: 384 KIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYADPSVCERVL-Q 560 KIF+GG+ T ++ +F K+G++ + IM++R TG +RGFGF+T+ V E ++ Q Sbjct: 134 KIFVGGIPTTITEDEFKDYFSKFGKVAEHQIMQDRSTGRSRGFGFITFDSEQVVEEIISQ 193
Query: 561 DKHV-LDGKTVEIXRSIPRE 617 K + L GK VEI ++ P++ Sbjct: 194 GKMIELGGKQVEIKKAEPKK 213
>tr|A9T3G3|A9T3G3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_139747 PE=4 SV=1 Length = 199
Score = 127 bits (320), Expect = 4e-28 Identities = 58/89 (65%), Positives = 75/89 (84%), Gaps = 2/89 (2%) Frame = +3
Query: 381 GKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYADPSVCERVLQ 560 GKIFIGGL+ +T+T+ L HF+KYGEIID+VIM++R TGH RGFGFVT+ADP+VC+ V+ Sbjct: 1 GKIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPAVCDNVVL 60
Query: 561 DKHVLDGKTVEIXRSIPREKMV--KGPRT 641 DKHV+DG+TVE +S+PRE M KGP+T Sbjct: 61 DKHVIDGRTVEAKKSVPRENMAASKGPKT 89
Score = 57.8 bits (138), Expect = 6e-07 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 5/85 (5%) Frame = +3
Query: 351 PTSSKAASG---SGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFV 521 P + AAS + KIF+GG+ T E+ +F +G +++ IM++ TG +RGFGFV Sbjct: 77 PRENMAASKGPKTKKIFVGGIPPSITDEEFKSYFASFGSVVEHQIMQDHSTGRSRGFGFV 136
Query: 522 TYADPSVCERVLQ--DKHVLDGKTV 590 T+ V E +L H L GK V Sbjct: 137 TFDSEQVVEDILAHGKMHELGGKQV 161
>tr|A9RJQ3|A9RJQ3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_115456 PE=4 SV=1 Length = 177
Score = 127 bits (320), Expect = 4e-28 Identities = 58/89 (65%), Positives = 75/89 (84%), Gaps = 2/89 (2%) Frame = +3
Query: 381 GKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYADPSVCERVLQ 560 GKIFIGGL+ +T+T+ L HF+KYGEIID+VIM++R TGH RGFGFVT+ADP+VC+ V+ Sbjct: 1 GKIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPAVCDNVVL 60
Query: 561 DKHVLDGKTVEIXRSIPREKMV--KGPRT 641 DKHV+DG+TVE +S+PRE M KGP+T Sbjct: 61 DKHVIDGRTVEAKKSVPRENMAASKGPKT 89
Score = 57.0 bits (136), Expect = 1e-06 Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 5/85 (5%) Frame = +3
Query: 351 PTSSKAASG---SGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFV 521 P + AAS + KIF+GG+ T E+ +F +G +++ IM++ TG +RGFGFV Sbjct: 77 PRENMAASKGPKTKKIFVGGIPPSITDEEFKSYFGGFGSVVEHQIMQDHSTGRSRGFGFV 136
Query: 522 TYADPSVCERVLQ--DKHVLDGKTV 590 T+ + V E +L H L GK V Sbjct: 137 TFDNEQVVEDILAHGKMHELGGKQV 161
>tr|A9RFC1|A9RFC1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113207 PE=4 SV=1 Length = 176
Score = 127 bits (318), Expect = 8e-28 Identities = 57/89 (64%), Positives = 75/89 (84%), Gaps = 2/89 (2%) Frame = +3
Query: 381 GKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYADPSVCERVLQ 560 GKIFIGGL+ +T+T+ L HF+KYGEIID+VIM++R TGH RGFGFVT+ADP VC++V+ Sbjct: 1 GKIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPDVCDKVVL 60
Query: 561 DKHVLDGKTVEIXRSIPREKMV--KGPRT 641 DKHV+DG+TVE +S+PRE + KGP+T Sbjct: 61 DKHVIDGRTVEAKKSVPRENLATSKGPKT 89
Score = 55.5 bits (132), Expect = 3e-06 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%) Frame = +3
Query: 345 KEPTSSKAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVT 524 +E ++ + KIF+GG+ T E+ +F +G +++ IM++ TG +RGFGFVT Sbjct: 78 RENLATSKGPKTKKIFVGGIPPSITDEEFKSYFAGFGSVMEHQIMQDHSTGRSRGFGFVT 137
Query: 525 YADPSVCERVLQ--DKHVLDGKTV 590 + V E +L H L GK V Sbjct: 138 FDSEQVVEDILAHGKLHELAGKQV 161
>tr|B8LKC7|B8LKC7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 371
Score = 121 bits (303), Expect = 4e-26 Identities = 59/100 (59%), Positives = 76/100 (76%), Gaps = 1/100 (1%) Frame = +3
Query: 345 KEPTSSKAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVT 524 K +S+ S GKIFIGGL+ ET++ TK+F KYGE+ DSVIM++R TG+ RGFGFVT Sbjct: 39 KNNGASRDTSSPGKIFIGGLSRETSSATFTKYFSKYGELTDSVIMKDRATGNPRGFGFVT 98
Query: 525 YADPSVCERVLQDKHVLDGKTVEIXRSIPR-EKMVKGPRT 641 YADPSV ++V++DKH +DGK VEI R+IPR KGP+T Sbjct: 99 YADPSVVDKVIKDKHFIDGKMVEIKRTIPRGNAATKGPKT 138
Score = 62.4 bits (150), Expect = 2e-08 Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 4/95 (4%) Frame = +3
Query: 351 PTSSKAASG--SGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVT 524 P + A G + KIF+GG+ T ++ +F K+G++++ IM++ TG +RGFGFVT Sbjct: 127 PRGNAATKGPKTKKIFVGGIPTSITEDEFKDYFSKFGKVLEHQIMQDHGTGRSRGFGFVT 186
Query: 525 YADPSVCERVLQDKHV--LDGKTVEIXRSIPREKM 623 + E +L + L GK VEI ++ P++ + Sbjct: 187 FDSEEAVEEILSHGKMCELGGKQVEIKKAEPKKAL 221
>tr|B7ZX91|B7ZX91_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 413
Score = 119 bits (299), Expect = 1e-25 Identities = 56/96 (58%), Positives = 75/96 (78%), Gaps = 2/96 (2%) Frame = +3
Query: 360 SKAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYADPS 539 S SGKIF+GG+A ETT E TKHF+KYG I DSVIM+++ T RGFGFVT++DPS Sbjct: 93 SSGGDASGKIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPS 152
Query: 540 VCERVLQDKHVLDGKTVEIXRSIPREKMVK--GPRT 641 V +RVL+D+HV+DG+TVE+ R++P+E+M GP+T Sbjct: 153 VLDRVLEDEHVIDGRTVEVKRTVPKEEMSSKDGPKT 188
Score = 77.8 bits (190), Expect = 5e-13 Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 2/93 (2%) Frame = +3
Query: 345 KEPTSSKAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVT 524 KE SSK + KIF+GG+ T +KL +HF YG++++ IM + TG +RGFGFVT Sbjct: 177 KEEMSSKDGPKTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVT 236
Query: 525 YADPSVCERVLQD--KHVLDGKTVEIXRSIPRE 617 + ERV+ + H L GK VEI ++ P++ Sbjct: 237 FESEDAVERVMSEGRMHDLGGKQVEIKKAEPKK 269
>tr|B4FHJ8|B4FHJ8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 384
Score = 117 bits (294), Expect = 5e-25 Identities = 56/104 (53%), Positives = 76/104 (73%), Gaps = 2/104 (1%) Frame = +3
Query: 336 MAVKEPTSSKAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFG 515 +AV E GKIF+GG+A ETT E +KHF KYG I DSVIM+++ T RGFG Sbjct: 40 VAVGEDGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFG 99
Query: 516 FVTYADPSVCERVLQDKHVLDGKTVEIXRSIPREKMV--KGPRT 641 FVT++DPSV ++VL+D HV+DG+TVE+ R++PRE+M+ GP+T Sbjct: 100 FVTFSDPSVIDKVLEDDHVIDGRTVEVKRTVPREEMITKDGPKT 143
Score = 68.9 bits (167), Expect = 2e-10 Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 2/93 (2%) Frame = +3
Query: 345 KEPTSSKAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVT 524 +E +K + KIFIGGL T ++L HF YG +++ IM + TG +RGFGF+T Sbjct: 132 REEMITKDGPKTRKIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFIT 191
Query: 525 YADPSVCERVLQDKHVLD--GKTVEIXRSIPRE 617 + ERV+ + + D GK VEI ++ P++ Sbjct: 192 FESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 224
>tr|B4FEN7|B4FEN7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 227
Score = 117 bits (294), Expect = 5e-25 Identities = 56/104 (53%), Positives = 76/104 (73%), Gaps = 2/104 (1%) Frame = +3
Query: 336 MAVKEPTSSKAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFG 515 +AV E GKIF+GG+A ETT E +KHF KYG I DSVIM+++ T RGFG Sbjct: 40 VAVGEDGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFG 99
Query: 516 FVTYADPSVCERVLQDKHVLDGKTVEIXRSIPREKMV--KGPRT 641 FVT++DPSV ++VL+D HV+DG+TVE+ R++PRE+M+ GP+T Sbjct: 100 FVTFSDPSVIDKVLEDDHVIDGRTVEVKRTVPREEMITKDGPKT 143
Score = 68.9 bits (167), Expect = 2e-10 Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 2/93 (2%) Frame = +3
Query: 345 KEPTSSKAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVT 524 +E +K + KIFIGGL T ++L HF YG +++ IM + TG +RGFGF+T Sbjct: 132 REEMITKDGPKTRKIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFIT 191
Query: 525 YADPSVCERVLQDKHVLD--GKTVEIXRSIPRE 617 + ERV+ + + D GK VEI ++ P++ Sbjct: 192 FESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 224
>tr|A2YE63|A2YE63_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23407 PE=4 SV=1 Length = 407
Score = 117 bits (294), Expect = 5e-25 Identities = 55/95 (57%), Positives = 73/95 (76%), Gaps = 2/95 (2%) Frame = +3
Query: 363 KAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVTYADPSV 542 + SGKIF+GG+A ETT E TKHF KYG I DSVIM+++ T RGFGFVT++DPSV Sbjct: 85 EGGDSSGKIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSV 144
Query: 543 CERVLQDKHVLDGKTVEIXRSIPREKMVK--GPRT 641 ++VLQD+H +DG+TVE+ R++PRE+M GP+T Sbjct: 145 IDKVLQDEHTIDGRTVEVKRTVPREEMSSKDGPKT 179
Score = 76.3 bits (186), Expect = 2e-12 Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 2/93 (2%) Frame = +3
Query: 345 KEPTSSKAASGSGKIFIGGLAGETTTEKLTKHFRKYGEIIDSVIMRNRVTGHTRGFGFVT 524 +E SSK + KIF+GG+ T +KL +HF YG++++ IM + TG +RGFGFVT Sbjct: 168 REEMSSKDGPKTRKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVT 227
Query: 525 YADPSVCERVLQD--KHVLDGKTVEIXRSIPRE 617 + + ERV+ + H L GK VEI ++ P++ Sbjct: 228 FENEDAVERVMSEGRMHDLAGKQVEIKKAEPKK 260
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