DK955583 |
Clone id |
TST39A01NGRL0023_H22 |
Library |
TST39 |
Length |
580 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_H22. 5' end sequence. |
Accession |
DK955583 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL980Contig1 |
Sequence |
GGCAGGTCCTTGCTGTCAGCGGGCTTTGGAATACCGCAATGGCGCACCCCAATGATCCTG AGTTCATTGAGCTGGGAGTATTTGAGTGCATGGAAGCCCTTATTTGGAAAGGGATCAAGA ACAGGCAATGGCTAGCAAAGGATCAGAACATCTACATTCCTTATTATGCTGCCCATATTA TTGGCTCTTACACTATGAATATTGAGGAGTTCGCAGAAAGGGCAGTCAGGGCAGGTGTTA TTCAGCCATTGGTAGAGCTACTTCGAGGGAGGCTGACCTGGGTGGAGCAGAGGGTGGCTG TACGAGCACTAGGCCACCTGGCAACCTATGATTCCACTTTTCCATTTGTTGCATCACAGC CTCAAATCCTGGAGCTAGCTATTCAACTTGCTGTCAATGCCCTCGAGATTGTGTACACAC ATTTTTTCCAATTTGTGGATAAGCGTTTAAGCTACCATTGTGATTTGCTGACAAGGGGAA TGGGAGGTGTGGAGATGGAGTCAAGGAAGGCAGAAGAGTGGGCGAGTCAGTTGCAATGTT GGTCATTGCAGCTGATAAATTGCTTTGCTTTCAAACCTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O60179 |
Definition |
sp|O60179|UTP10_SCHPO U3 small nucleolar RNA-associated protein 10 OS=Schizosaccharomyces pombe |
Align length |
123 |
Score (bit) |
38.1 |
E-value |
0.032 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LX10 |
Definition |
tr|Q9LX10|Q9LX10_ARATH Putative uncharacterized protein T31P16_190 OS=Arabidopsis thaliana |
Align length |
192 |
Score (bit) |
352.0 |
E-value |
6.0e-96 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955583|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_H22, 5' (580 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9LX10|Q9LX10_ARATH Putative uncharacterized protein T31P16_1... 352 6e-96 tr|Q0WMT6|Q0WMT6_ARATH Putative uncharacterized protein At5g1020... 352 6e-96 tr|B7U9S2|B7U9S2_CARAS AT5G10200-like protein OS=Cardaminopsis a... 352 8e-96 tr|A7R002|A7R002_VITVI Chromosome chr7 scaffold_294, whole genom... 351 2e-95 tr|A5C8E6|A5C8E6_VITVI Putative uncharacterized protein OS=Vitis... 351 2e-95 tr|A9SVL4|A9SVL4_PHYPA Predicted protein OS=Physcomitrella paten... 350 4e-95 tr|Q6L4Y6|Q6L4Y6_ORYSJ Os05g0421300 protein OS=Oryza sativa subs... 349 5e-95 tr|B8AYC8|B8AYC8_ORYSI Putative uncharacterized protein OS=Oryza... 349 5e-95 tr|A3B457|A3B457_ORYSJ Putative uncharacterized protein OS=Oryza... 349 5e-95 tr|Q4ABQ0|Q4ABQ0_BRARP 80A08_17 OS=Brassica rapa subsp. pekinens... 345 8e-94 tr|A9THA5|A9THA5_PHYPA Predicted protein OS=Physcomitrella paten... 325 1e-87 tr|A7NU61|A7NU61_VITVI Chromosome chr18 scaffold_1, whole genome... 257 4e-67 tr|A5B9D4|A5B9D4_VITVI Putative uncharacterized protein OS=Vitis... 257 4e-67 tr|A7PLL7|A7PLL7_VITVI Chromosome chr7 scaffold_20, whole genome... 246 7e-64 tr|Q9FMH1|Q9FMH1_ARATH Similarity to unknown protein OS=Arabidop... 233 4e-60 tr|Q9SN15|Q9SN15_ARATH Putative uncharacterized protein F3A4.110... 223 5e-57 tr|Q8H061|Q8H061_ORYSJ Putative uncharacterized protein OSJNBa00... 183 5e-45 tr|Q70JP1|Q70JP1_WHEAT Putative uncharacterized protein (Fragmen... 183 5e-45 tr|B8AQG6|B8AQG6_ORYSI Putative uncharacterized protein OS=Oryza... 183 5e-45 tr|A3AFB3|A3AFB3_ORYSJ Putative uncharacterized protein OS=Oryza... 177 3e-43 tr|A9TWA5|A9TWA5_PHYPA Predicted protein OS=Physcomitrella paten... 37 1.0 tr|B6A9W1|B6A9W1_9CRYT RNA-metabolising metallo-beta-lactamase f... 35 3.0 tr|Q2TVY3|Q2TVY3_ASPOR Regulator of Rac1 OS=Aspergillus oryzae G... 35 3.9 tr|Q0C7D9|Q0C7D9_ASPTN Putative uncharacterized protein OS=Asper... 35 3.9 tr|A1C8D5|A1C8D5_ASPCL Predicted protein OS=Aspergillus clavatus... 35 3.9 tr|A9SHX6|A9SHX6_PHYPA Predicted protein OS=Physcomitrella paten... 34 5.1 tr|A2QHH9|A2QHH9_ASPNC Similarity to hypothetical protein CG5336... 34 5.1 tr|A9SKE0|A9SKE0_PHYPA Predicted protein OS=Physcomitrella paten... 34 6.7 tr|A7PU99|A7PU99_VITVI Chromosome chr7 scaffold_31, whole genome... 34 6.7 tr|A4S8D9|A4S8D9_OSTLU Predicted protein OS=Ostreococcus lucimar... 34 6.7
>tr|Q9LX10|Q9LX10_ARATH Putative uncharacterized protein T31P16_190 OS=Arabidopsis thaliana GN=T31P16_190 PE=4 SV=1 Length = 621
Score = 352 bits (904), Expect = 6e-96 Identities = 167/192 (86%), Positives = 181/192 (94%) Frame = +3
Query: 3 QVLAVSGLWNTAMAHPNDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHII 182 QVL +SGLWNTAMAHPNDPEFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHII Sbjct: 46 QVLPISGLWNTAMAHPNDPEFIELGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHII 105
Query: 183 GSYTMNIEEFAERAVRAGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQP 362 GSYTMN+EEFAERAV AGVI PLVELLRGRLTWVEQRVAVRALGHLATY STFP VA Sbjct: 106 GSYTMNMEEFAERAVEAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPAVADHG 165
Query: 363 QILELAIQLAVNALEIVYTHFFQFVDKRLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW 542 +ILELAIQLA+++LEIVY+HF+Q+ D+RLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW Sbjct: 166 EILELAIQLAMSSLEIVYSHFYQYPDRRLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW 225
Query: 543 SLQLINCFAFKP 578 SLQLINCFAFKP Sbjct: 226 SLQLINCFAFKP 237
>tr|Q0WMT6|Q0WMT6_ARATH Putative uncharacterized protein At5g10200 OS=Arabidopsis thaliana GN=At5g10200 PE=2 SV=1 Length = 631
Score = 352 bits (904), Expect = 6e-96 Identities = 167/192 (86%), Positives = 181/192 (94%) Frame = +3
Query: 3 QVLAVSGLWNTAMAHPNDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHII 182 QVL +SGLWNTAMAHPNDPEFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHII Sbjct: 46 QVLPISGLWNTAMAHPNDPEFIELGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHII 105
Query: 183 GSYTMNIEEFAERAVRAGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQP 362 GSYTMN+EEFAERAV AGVI PLVELLRGRLTWVEQRVAVRALGHLATY STFP VA Sbjct: 106 GSYTMNMEEFAERAVEAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPAVADHG 165
Query: 363 QILELAIQLAVNALEIVYTHFFQFVDKRLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW 542 +ILELAIQLA+++LEIVY+HF+Q+ D+RLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW Sbjct: 166 EILELAIQLAMSSLEIVYSHFYQYPDRRLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW 225
Query: 543 SLQLINCFAFKP 578 SLQLINCFAFKP Sbjct: 226 SLQLINCFAFKP 237
>tr|B7U9S2|B7U9S2_CARAS AT5G10200-like protein OS=Cardaminopsis arenosa PE=4 SV=1 Length = 630
Score = 352 bits (903), Expect = 8e-96 Identities = 166/192 (86%), Positives = 181/192 (94%) Frame = +3
Query: 3 QVLAVSGLWNTAMAHPNDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHII 182 QVL +SGLWNTAMAHPNDPEFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHII Sbjct: 46 QVLPISGLWNTAMAHPNDPEFIELGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHII 105
Query: 183 GSYTMNIEEFAERAVRAGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQP 362 GSYTMN+EEFAERAV AGV+ PLVELLRGRLTWVEQRVAVRALGHLATY STFP VA Sbjct: 106 GSYTMNMEEFAERAVEAGVVAPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPAVADHG 165
Query: 363 QILELAIQLAVNALEIVYTHFFQFVDKRLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW 542 +ILELAIQLA+++LEIVY+HF+Q+ D+RLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW Sbjct: 166 EILELAIQLAMSSLEIVYSHFYQYPDRRLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW 225
Query: 543 SLQLINCFAFKP 578 SLQLINCFAFKP Sbjct: 226 SLQLINCFAFKP 237
>tr|A7R002|A7R002_VITVI Chromosome chr7 scaffold_294, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010915001 PE=4 SV=1 Length = 627
Score = 351 bits (900), Expect = 2e-95 Identities = 166/192 (86%), Positives = 182/192 (94%) Frame = +3
Query: 3 QVLAVSGLWNTAMAHPNDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHII 182 QVL +SGLWNTAMAHPNDPEFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHII Sbjct: 45 QVLPISGLWNTAMAHPNDPEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHII 104
Query: 183 GSYTMNIEEFAERAVRAGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQP 362 GSYTMN+EEFAE AV AGVI PLVELLRGRLTWVEQRVAVRALGHLATY STFP +AS Sbjct: 105 GSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYASTFPALASHG 164
Query: 363 QILELAIQLAVNALEIVYTHFFQFVDKRLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW 542 +ILEL+IQLA+++LEIVY+HF+Q+VD+RLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW Sbjct: 165 EILELSIQLAMSSLEIVYSHFYQYVDRRLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW 224
Query: 543 SLQLINCFAFKP 578 SLQLINCFAFKP Sbjct: 225 SLQLINCFAFKP 236
>tr|A5C8E6|A5C8E6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023407 PE=4 SV=1 Length = 635
Score = 351 bits (900), Expect = 2e-95 Identities = 166/192 (86%), Positives = 182/192 (94%) Frame = +3
Query: 3 QVLAVSGLWNTAMAHPNDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHII 182 QVL +SGLWNTAMAHPNDPEFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHII Sbjct: 45 QVLPISGLWNTAMAHPNDPEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHII 104
Query: 183 GSYTMNIEEFAERAVRAGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQP 362 GSYTMN+EEFAE AV AGVI PLVELLRGRLTWVEQRVAVRALGHLATY STFP +AS Sbjct: 105 GSYTMNMEEFAESAVHAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYASTFPALASHG 164
Query: 363 QILELAIQLAVNALEIVYTHFFQFVDKRLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW 542 +ILEL+IQLA+++LEIVY+HF+Q+VD+RLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW Sbjct: 165 EILELSIQLAMSSLEIVYSHFYQYVDRRLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW 224
Query: 543 SLQLINCFAFKP 578 SLQLINCFAFKP Sbjct: 225 SLQLINCFAFKP 236
>tr|A9SVL4|A9SVL4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_188847 PE=4 SV=1 Length = 643
Score = 350 bits (897), Expect = 4e-95 Identities = 167/191 (87%), Positives = 180/191 (94%) Frame = +3
Query: 3 QVLAVSGLWNTAMAHPNDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHII 182 QVLA+SGLWNTAMAHPNDPEFIELG+FECM LIWKGI++R WLA+DQNIYIPYYAAHII Sbjct: 45 QVLAISGLWNTAMAHPNDPEFIELGIFECMARLIWKGIEDRNWLAQDQNIYIPYYAAHII 104
Query: 183 GSYTMNIEEFAERAVRAGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQP 362 GSYTMN+EEFAE+AVRAGVI LVELLR RLTWVEQRVAVRALGHLATYDSTFP VA+ Sbjct: 105 GSYTMNVEEFAEQAVRAGVIPALVELLRDRLTWVEQRVAVRALGHLATYDSTFPAVAAHT 164
Query: 363 QILELAIQLAVNALEIVYTHFFQFVDKRLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW 542 ILEL+IQLA++ALEIVYTHF QFVDKRLSYHCDLLTRGMGG+EMESRKAEEWASQLQCW Sbjct: 165 DILELSIQLAIDALEIVYTHFLQFVDKRLSYHCDLLTRGMGGLEMESRKAEEWASQLQCW 224
Query: 543 SLQLINCFAFK 575 SLQLINC+AFK Sbjct: 225 SLQLINCYAFK 235
>tr|Q6L4Y6|Q6L4Y6_ORYSJ Os05g0421300 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0092E21.8 PE=2 SV=1 Length = 601
Score = 349 bits (896), Expect = 5e-95 Identities = 165/191 (86%), Positives = 179/191 (93%) Frame = +3
Query: 3 QVLAVSGLWNTAMAHPNDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHII 182 QVL +SGLWNTAMAHPNDPEFI LG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHII Sbjct: 45 QVLPISGLWNTAMAHPNDPEFINLGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHII 104
Query: 183 GSYTMNIEEFAERAVRAGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQP 362 GSYTMN+EEFAERAVRAGVI PLVELLRGRLTWVEQRVAVRALGHLATY STFP VA Sbjct: 105 GSYTMNMEEFAERAVRAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPAVADHG 164
Query: 363 QILELAIQLAVNALEIVYTHFFQFVDKRLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW 542 ++LELAIQLA ++LEIVY+HF+QFVD+R+ YHCDLLTRGMGGVEMESRKAEEWASQLQCW Sbjct: 165 EVLELAIQLASSSLEIVYSHFYQFVDRRIGYHCDLLTRGMGGVEMESRKAEEWASQLQCW 224
Query: 543 SLQLINCFAFK 575 SLQLINCFAFK Sbjct: 225 SLQLINCFAFK 235
>tr|B8AYC8|B8AYC8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20013 PE=4 SV=1 Length = 601
Score = 349 bits (896), Expect = 5e-95 Identities = 165/191 (86%), Positives = 179/191 (93%) Frame = +3
Query: 3 QVLAVSGLWNTAMAHPNDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHII 182 QVL +SGLWNTAMAHPNDPEFI LG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHII Sbjct: 45 QVLPISGLWNTAMAHPNDPEFINLGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHII 104
Query: 183 GSYTMNIEEFAERAVRAGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQP 362 GSYTMN+EEFAERAVRAGVI PLVELLRGRLTWVEQRVAVRALGHLATY STFP VA Sbjct: 105 GSYTMNMEEFAERAVRAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPAVADHG 164
Query: 363 QILELAIQLAVNALEIVYTHFFQFVDKRLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW 542 ++LELAIQLA ++LEIVY+HF+QFVD+R+ YHCDLLTRGMGGVEMESRKAEEWASQLQCW Sbjct: 165 EVLELAIQLASSSLEIVYSHFYQFVDRRIGYHCDLLTRGMGGVEMESRKAEEWASQLQCW 224
Query: 543 SLQLINCFAFK 575 SLQLINCFAFK Sbjct: 225 SLQLINCFAFK 235
>tr|A3B457|A3B457_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017829 PE=4 SV=1 Length = 540
Score = 349 bits (896), Expect = 5e-95 Identities = 165/191 (86%), Positives = 179/191 (93%) Frame = +3
Query: 3 QVLAVSGLWNTAMAHPNDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHII 182 QVL +SGLWNTAMAHPNDPEFI LG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHII Sbjct: 45 QVLPISGLWNTAMAHPNDPEFINLGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHII 104
Query: 183 GSYTMNIEEFAERAVRAGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQP 362 GSYTMN+EEFAERAVRAGVI PLVELLRGRLTWVEQRVAVRALGHLATY STFP VA Sbjct: 105 GSYTMNMEEFAERAVRAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPAVADHG 164
Query: 363 QILELAIQLAVNALEIVYTHFFQFVDKRLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW 542 ++LELAIQLA ++LEIVY+HF+QFVD+R+ YHCDLLTRGMGGVEMESRKAEEWASQLQCW Sbjct: 165 EVLELAIQLASSSLEIVYSHFYQFVDRRIGYHCDLLTRGMGGVEMESRKAEEWASQLQCW 224
Query: 543 SLQLINCFAFK 575 SLQLINCFAFK Sbjct: 225 SLQLINCFAFK 235
>tr|Q4ABQ0|Q4ABQ0_BRARP 80A08_17 OS=Brassica rapa subsp. pekinensis GN=80A08_17 PE=4 SV=1 Length = 631
Score = 345 bits (886), Expect = 8e-94 Identities = 164/191 (85%), Positives = 179/191 (93%) Frame = +3
Query: 3 QVLAVSGLWNTAMAHPNDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHII 182 QVL +SGLWNTAMAHPNDPEFI+LG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHII Sbjct: 46 QVLPISGLWNTAMAHPNDPEFIDLGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHII 105
Query: 183 GSYTMNIEEFAERAVRAGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQP 362 GSYTMN+EEFAERAV AGVI PLVELLRGRLTWVEQRVAVRALGHLATY STF VAS Sbjct: 106 GSYTMNMEEFAERAVEAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFSSVASHG 165
Query: 363 QILELAIQLAVNALEIVYTHFFQFVDKRLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW 542 +ILELAIQL +++LEIVY+HF+Q+ D+RLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW Sbjct: 166 EILELAIQLGMSSLEIVYSHFYQYPDRRLSYHCDLLTRGMGGVEMESRKAEEWASQLQCW 225
Query: 543 SLQLINCFAFK 575 SLQLINCFAFK Sbjct: 226 SLQLINCFAFK 236
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