DK955588 |
Clone id |
TST39A01NGRL0023_I03 |
Library |
TST39 |
Length |
562 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_I03. 5' end sequence. |
Accession |
DK955588 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GTCAGGTGGCAGTTATGGCATCGGAAAGAGAATGAAGCTTGCATATACTAGAAAGATCAT TGACGCAATTCATGATGGGTCATTGCTGAAAGCCCAGTACAGTGCAACTTCCGTGTTCGG CTTGCAAATACCTGATAAAGTTGGTGGTGTCCCAAGCGATATACTACATCCAGAGAACAT GTGGAGTGATCAAAAGGTGTATCGCGAGACTTTAGAAAAATTGACTGGCCGTCTTTTTAC GACTTCGAAAAATTTTGTGAACTACAAGATTGGTGATGACAACAATTTGACTAGTGAGAT ACTTGCAGCCGGACCCAAACTATGAAACCAGGCTGCAGATCCAAAGTACAAAGGATGGTT TTCGGGTGTAGAATGTATATATATTTACTCATAGCAGGCATGGTTAGAGATTGTACATGT CCCTGCAAATGAATGTGCAGAAAAGCATTCTTTGGTCAGGTTGTGCTAGTCTTAAGTCGT TTAGCCCTGGAAAATTTTACCTGTTCAAATAAACCATGGACTAGGACAAATAAAATAATA GAGTCTGTATTTGTCCCAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P49292 |
Definition |
sp|P49292|PEPC1_UROPA Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Urochloa panicoides |
Align length |
105 |
Score (bit) |
135.0 |
E-value |
2.0e-31 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SXH2 |
Definition |
tr|A9SXH2|A9SXH2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
107 |
Score (bit) |
139.0 |
E-value |
8.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955588|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_I03, 5' (562 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SXH2|A9SXH2_PHYPA Predicted protein OS=Physcomitrella paten... 139 8e-32 tr|A7R835|A7R835_VITVI Chromosome undetermined scaffold_2224, wh... 139 8e-32 tr|A7R327|A7R327_VITVI Chromosome chr7 scaffold_476, whole genom... 139 8e-32 tr|A7R2X1|A7R2X1_VITVI Chromosome undetermined scaffold_461, who... 139 8e-32 tr|Q94LX7|Q94LX7_FLAPR Phosphoenolpyruvate carboxykinase OS=Flav... 138 2e-31 tr|Q94LX9|Q94LX9_FLATR Phosphoenolpyruvate carboxykinase OS=Flav... 137 5e-31 tr|Q94LX8|Q94LX8_FLATR Phosphoenolpyruvate carboxykinase OS=Flav... 135 1e-30 tr|Q5KQS7|Q5KQS7_9POAL Phosphoenolpyruvate carboxykinase OS=Zoys... 135 2e-30 tr|Q39294|Q39294_BRANA PEP-carboxykinase (Fragment) OS=Brassica ... 134 3e-30 tr|Q56WR5|Q56WR5_ARATH Phosphoenolpyruvate carboxykinase-like pr... 134 3e-30 tr|Q0WWL8|Q0WWL8_ARATH Phosphoenolpyruvate carboxykinase (ATP)-l... 134 3e-30 tr|B7ZZR2|B7ZZR2_MAIZE Putative uncharacterized protein OS=Zea m... 134 3e-30 tr|B5X574|B5X574_ARATH At5g65690 OS=Arabidopsis thaliana PE=2 SV=1 134 3e-30 tr|A9RC11|A9RC11_PHYPA Predicted protein OS=Physcomitrella paten... 134 3e-30 tr|Q56X60|Q56X60_ARATH Phosphoenolpyruvate carboxykinase (Fragme... 134 4e-30 tr|Q8W505|Q8W505_SOLLC Phosphoenolpyruvate carboxykinase OS=Sola... 133 8e-30 tr|Q8W2C2|Q8W2C2_SOLLC Phosphoenolpyruvate carboxykinase (Fragme... 133 8e-30 tr|A2XEP1|A2XEP1_ORYSI Putative uncharacterized protein OS=Oryza... 131 3e-29 tr|Q10NX2|Q10NX2_ORYSJ Os03g0255500 protein OS=Oryza sativa subs... 130 4e-29 tr|Q10NX1|Q10NX1_ORYSJ Phosphoenolpyruvate carboxykinase, putati... 130 4e-29 tr|A3AG67|A3AG67_ORYSJ Putative uncharacterized protein OS=Oryza... 130 4e-29 tr|A9T3G9|A9T3G9_PHYPA Predicted protein OS=Physcomitrella paten... 129 1e-28 tr|Q7XAU8|Q7XAU8_9POAL Phosphoenolpyruvate carboxykinase OS=Uroc... 128 2e-28 tr|O49547|O49547_ARATH Phosphoenolpyruvate carboxykinase (ATP) -... 128 2e-28 tr|A2I993|A2I993_9CARY Cold-induced phosphoenolpyruvate carboxyk... 128 2e-28 tr|A9SAK3|A9SAK3_PHYPA Predicted protein OS=Physcomitrella paten... 127 3e-28 tr|Q6EZB0|Q6EZB0_CUCSA PEPCK OS=Cucumis sativus GN=Pepck PE=4 SV=1 124 4e-27 tr|Q8RV78|Q8RV78_ORYSJ Putative phosphoenolpyruvate carboxykinas... 116 1e-24 tr|Q7G466|Q7G466_ORYSJ Os10g0204400 protein OS=Oryza sativa subs... 116 1e-24 tr|A2Z5S5|A2Z5S5_ORYSI Putative uncharacterized protein OS=Oryza... 116 1e-24
>tr|A9SXH2|A9SXH2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_136941 PE=4 SV=1 Length = 649
Score = 139 bits (351), Expect = 8e-32 Identities = 64/107 (59%), Positives = 82/107 (76%) Frame = +2
Query: 2 SGGSYGIGKRMKLAYTRKIIDAIHDGSLLKAQYSATSVFGLQIPDKVGGVPSDILHPENM 181 +GGSYG+G RMKLAYTRKIIDAIHDGSLL A+Y T +F L +P +V GVPS++L P+N Sbjct: 542 TGGSYGVGSRMKLAYTRKIIDAIHDGSLLNAKYVQTPIFNLSVPTEVNGVPSEVLEPQNA 601
Query: 182 WSDQKVYRETLEKLTGRLFTTSKNFVNYKIGDDNNLTSEILAAGPKL 322 WSD+K+Y +TL+KL G + + +YK+G DNNLT +IL AGP L Sbjct: 602 WSDKKLYNKTLKKLAGLFQKNFEVYADYKVGGDNNLTQKILEAGPVL 648
>tr|A7R835|A7R835_VITVI Chromosome undetermined scaffold_2224, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011154001 PE=4 SV=1 Length = 446
Score = 139 bits (351), Expect = 8e-32 Identities = 70/105 (66%), Positives = 79/105 (75%) Frame = +2
Query: 2 SGGSYGIGKRMKLAYTRKIIDAIHDGSLLKAQYSATSVFGLQIPDKVGGVPSDILHPENM 181 SGGSYG GKR+KLA+TRKIIDAIH GSLLKA Y T VFGL+IP +V GVPS+IL P N Sbjct: 340 SGGSYGSGKRIKLAHTRKIIDAIHSGSLLKANYKKTQVFGLEIPTEVEGVPSEILDPVNT 399
Query: 182 WSDQKVYRETLEKLTGRLFTTSKNFVNYKIGDDNNLTSEILAAGP 316 W+D+K Y ETL KL G + F NYKIG DN LT EI+AAGP Sbjct: 400 WTDKKAYDETLLKLAGLFKKNFEVFANYKIGKDNKLTEEIVAAGP 444
>tr|A7R327|A7R327_VITVI Chromosome chr7 scaffold_476, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013415001 PE=4 SV=1 Length = 136
Score = 139 bits (351), Expect = 8e-32 Identities = 70/105 (66%), Positives = 79/105 (75%) Frame = +2
Query: 2 SGGSYGIGKRMKLAYTRKIIDAIHDGSLLKAQYSATSVFGLQIPDKVGGVPSDILHPENM 181 SGGSYG GKR+KLA+TRKIIDAIH GSLLKA Y T VFGL+IP +V GVPS+IL P N Sbjct: 30 SGGSYGSGKRIKLAHTRKIIDAIHSGSLLKANYKKTQVFGLEIPTEVEGVPSEILDPVNT 89
Query: 182 WSDQKVYRETLEKLTGRLFTTSKNFVNYKIGDDNNLTSEILAAGP 316 W+D+K Y ETL KL G + F NYKIG DN LT EI+AAGP Sbjct: 90 WTDKKAYDETLLKLAGLFKKNFEVFANYKIGKDNKLTEEIVAAGP 134
>tr|A7R2X1|A7R2X1_VITVI Chromosome undetermined scaffold_461, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013328001 PE=4 SV=1 Length = 171
Score = 139 bits (351), Expect = 8e-32 Identities = 70/105 (66%), Positives = 79/105 (75%) Frame = +2
Query: 2 SGGSYGIGKRMKLAYTRKIIDAIHDGSLLKAQYSATSVFGLQIPDKVGGVPSDILHPENM 181 SGGSYG GKR+KLA+TRKIIDAIH GSLLKA Y T VFGL+IP +V GVPS+IL P N Sbjct: 65 SGGSYGSGKRIKLAHTRKIIDAIHSGSLLKANYKKTQVFGLEIPTEVEGVPSEILDPVNT 124
Query: 182 WSDQKVYRETLEKLTGRLFTTSKNFVNYKIGDDNNLTSEILAAGP 316 W+D+K Y ETL KL G + F NYKIG DN LT EI+AAGP Sbjct: 125 WTDKKAYDETLLKLAGLFKKNFEVFANYKIGKDNKLTEEIVAAGP 169
>tr|Q94LX7|Q94LX7_FLAPR Phosphoenolpyruvate carboxykinase OS=Flaveria pringlei GN=pck3-11 PE=2 SV=1 Length = 658
Score = 138 bits (347), Expect = 2e-31 Identities = 69/105 (65%), Positives = 78/105 (74%) Frame = +2
Query: 2 SGGSYGIGKRMKLAYTRKIIDAIHDGSLLKAQYSATSVFGLQIPDKVGGVPSDILHPENM 181 SGGSYG G RMKLAYTRKIIDAIH G LL A Y T VFGL+IP +V GVPS+IL P N Sbjct: 552 SGGSYGAGSRMKLAYTRKIIDAIHSGKLLNANYKKTEVFGLEIPTEVEGVPSEILDPVNT 611
Query: 182 WSDQKVYRETLEKLTGRLFTTSKNFVNYKIGDDNNLTSEILAAGP 316 WS++K Y+ETL KL G + FVN+KIG D+ LT EILAAGP Sbjct: 612 WSNKKAYKETLLKLAGLFKNNFEVFVNHKIGKDDKLTQEILAAGP 656
>tr|Q94LX9|Q94LX9_FLATR Phosphoenolpyruvate carboxykinase OS=Flaveria trinervia GN=pck4-9 PE=2 SV=1 Length = 662
Score = 137 bits (344), Expect = 5e-31 Identities = 69/105 (65%), Positives = 77/105 (73%) Frame = +2
Query: 2 SGGSYGIGKRMKLAYTRKIIDAIHDGSLLKAQYSATSVFGLQIPDKVGGVPSDILHPENM 181 SGGSYG G RMKLAYTRKIIDAIH G LL A Y T VFGL+IP V GVPS+IL P N Sbjct: 556 SGGSYGSGSRMKLAYTRKIIDAIHSGKLLNANYKKTEVFGLEIPTDVEGVPSEILDPVNT 615
Query: 182 WSDQKVYRETLEKLTGRLFTTSKNFVNYKIGDDNNLTSEILAAGP 316 WS++K Y+ETL KL G + FVN+KIG D+ LT EILAAGP Sbjct: 616 WSNKKAYKETLLKLAGLFKNNFEVFVNHKIGKDDKLTQEILAAGP 660
>tr|Q94LX8|Q94LX8_FLATR Phosphoenolpyruvate carboxykinase OS=Flaveria trinervia GN=pck3-19 PE=2 SV=1 Length = 662
Score = 135 bits (341), Expect = 1e-30 Identities = 68/105 (64%), Positives = 77/105 (73%) Frame = +2
Query: 2 SGGSYGIGKRMKLAYTRKIIDAIHDGSLLKAQYSATSVFGLQIPDKVGGVPSDILHPENM 181 SGGSYG G RMKLAYTRKIIDAIH G LL A Y T VFGL+IP +V VPS+IL P N Sbjct: 556 SGGSYGAGSRMKLAYTRKIIDAIHSGKLLNANYKKTEVFGLEIPTEVESVPSEILDPVNT 615
Query: 182 WSDQKVYRETLEKLTGRLFTTSKNFVNYKIGDDNNLTSEILAAGP 316 WS++K Y+ETL KL G + FVN+KIG D+ LT EILAAGP Sbjct: 616 WSNKKAYKETLLKLAGLFKNNFEVFVNHKIGKDDKLTQEILAAGP 660
>tr|Q5KQS7|Q5KQS7_9POAL Phosphoenolpyruvate carboxykinase OS=Zoysia japonica GN=PCK PE=4 SV=1 Length = 653
Score = 135 bits (339), Expect = 2e-30 Identities = 65/105 (61%), Positives = 77/105 (73%) Frame = +2
Query: 2 SGGSYGIGKRMKLAYTRKIIDAIHDGSLLKAQYSATSVFGLQIPDKVGGVPSDILHPENM 181 SGG YG+GKR+KL YTRKIIDAIH G LL A Y T VFGL+IP ++ GVPS+IL P N Sbjct: 547 SGGRYGVGKRIKLPYTRKIIDAIHSGELLTASYKKTEVFGLEIPTQIDGVPSEILDPINT 606
Query: 182 WSDQKVYRETLEKLTGRLFTTSKNFVNYKIGDDNNLTSEILAAGP 316 W D+ Y+ETL KL G + F +YKIGDD++LT EILAAGP Sbjct: 607 WEDKAAYKETLLKLAGLFKNNFEVFASYKIGDDSSLTDEILAAGP 651
>tr|Q39294|Q39294_BRANA PEP-carboxykinase (Fragment) OS=Brassica napus PE=2 SV=1 Length = 412
Score = 134 bits (338), Expect = 3e-30 Identities = 64/105 (60%), Positives = 78/105 (74%) Frame = +2
Query: 2 SGGSYGIGKRMKLAYTRKIIDAIHDGSLLKAQYSATSVFGLQIPDKVGGVPSDILHPENM 181 SGGSYG+G R+KLAYTRKIIDAIH G+LLKA Y T +FG +IP ++ G+PS+IL P N Sbjct: 306 SGGSYGVGNRIKLAYTRKIIDAIHSGTLLKANYKKTEIFGFEIPTEIEGIPSEILDPINS 365
Query: 182 WSDQKVYRETLEKLTGRLFTTSKNFVNYKIGDDNNLTSEILAAGP 316 WSD+K ++ETL KL G + F N+KIG D LT EILAAGP Sbjct: 366 WSDKKAHKETLLKLGGLFKKNFETFANHKIGVDGKLTEEILAAGP 410
>tr|Q56WR5|Q56WR5_ARATH Phosphoenolpyruvate carboxykinase-like protein OS=Arabidopsis thaliana GN=At4g37870 PE=2 SV=1 Length = 455
Score = 134 bits (337), Expect = 3e-30 Identities = 64/105 (60%), Positives = 78/105 (74%) Frame = +2
Query: 2 SGGSYGIGKRMKLAYTRKIIDAIHDGSLLKAQYSATSVFGLQIPDKVGGVPSDILHPENM 181 SGGSYG+G R+KLAYTRKIIDAIH GSLLKA Y T +FG +IP ++ G+PS+IL P N Sbjct: 349 SGGSYGVGNRIKLAYTRKIIDAIHSGSLLKANYKKTEIFGFEIPTEIEGIPSEILDPVNS 408
Query: 182 WSDQKVYRETLEKLTGRLFTTSKNFVNYKIGDDNNLTSEILAAGP 316 WSD+K +++TL KL G + F N+KIG D LT EILAAGP Sbjct: 409 WSDKKAHKDTLVKLGGLFKKNFEVFANHKIGVDGKLTEEILAAGP 453
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