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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955593
Clone id TST39A01NGRL0023_I08
Library
Length 650
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_I08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GCTTGATGGGGCACTGGAGAAGCAGCGGCTGAAGATTGTTCGGAGCTTTTGCATTGCGAA
GCATCTGTATGATGAGCAGCTGAGTATGCGAAGGAATAGGAGCATGCACGACGGCATGCA
TGCATTGAAAGTGCTTGAAAGCTTTCAAGCAAATGAAAGGAGATACTTGGAAGTTGGGGC
TAACTTTTTACAGTCGACCAAGGCCACGCTCAACACACAACAAGAGAAGATGCTGAAGCA
GGTGGGTGCAACCGTTCGAAACTCATCTGTCTTTCTTGAAAGAATGGACTACCTTAAGGA
TAGGGAAGTCAAAGCTAAGTTGCTGTTAGAGAGGCTTGGGACTCATGAGCTGCATGATCT
CCTCGATTTCTACAAGATGATGGCCATGGCTACTTCAAATGTTCTAGAGAAAAGGCAAAA
TTCCGGCACTCTATAGTTGACATCGTCTCTCATGGTCTCCAATTGGACTTCAGCAATGGC
ATGAATGCCTTGCAAGAGGCAAATCCACATCCTTTGTATCGAGGGCTTCAGTAAAAAGTC
TCTCTTTCTCATAAAAAGCTTGTCTCCTCTTTCCTTATGTGTACCCTTACTCTGTGTTTA
TGCTAAGGTGATTAAGGGTTCAGCTTCCGTAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q17Y14
Definition sp|Q17Y14|CNPD_HELAH 2',3'-cyclic-nucleotide 2'-phosphodiesterase OS=Helicobacter acinonychis (strain Sheeba)
Align length 67
Score (bit) 31.2
E-value 4.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955593|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_I08, 5'
         (630 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q17Y14|CNPD_HELAH 2',3'-cyclic-nucleotide 2'-phosphodiesteras...    31   4.6  
sp|Q1RHE5|DAPB_RICBR Dihydrodipicolinate reductase OS=Rickettsia...    30   7.8  
sp|A8GV42|DAPB_RICB8 Dihydrodipicolinate reductase OS=Rickettsia...    30   7.8  

>sp|Q17Y14|CNPD_HELAH 2',3'-cyclic-nucleotide 2'-phosphodiesterase
           OS=Helicobacter acinonychis (strain Sheeba) GN=Hac_0656
           PE=3 SV=2
          Length = 529

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = +2

Query: 137 ESFQANERRYLEVGANFLQSTKATLNTQQEKMLKQVGATVRNSS----VFLERMDYLKDR 304
           + F  +E+RYLE     L+  +  L  ++E   KQ      N S    V L  M Y K+ 
Sbjct: 101 KEFVRDEKRYLEKEKQELEKERQILEQEKENFKKQYATCKENQSKALDVMLNYMAYTKE- 159

Query: 305 EVKAKLL 325
           E+K+ +L
Sbjct: 160 EIKSMIL 166


>sp|Q1RHE5|DAPB_RICBR Dihydrodipicolinate reductase OS=Rickettsia
           bellii (strain RML369-C) GN=dapB PE=3 SV=1
          Length = 250

 Score = 30.4 bits (67), Expect = 7.8
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
 Frame = +2

Query: 245 GATVRNSSVFLERMDYLKDREVKAKLLLERLGTHELHDLLDFYK----MMAMATSNVLEK 412
           GAT +     LER+D  K+ ++ AK       T +LH+L D  K    ++  +T  +LEK
Sbjct: 9   GATGKMGRTILERIDNFKNCKISAKF----NSTRDLHELNDLCKNSDVVIDFSTPEILEK 64

Query: 413 RQNS 424
             +S
Sbjct: 65  LVDS 68


>sp|A8GV42|DAPB_RICB8 Dihydrodipicolinate reductase OS=Rickettsia
           bellii (strain OSU 85-389) GN=dapB PE=3 SV=1
          Length = 250

 Score = 30.4 bits (67), Expect = 7.8
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
 Frame = +2

Query: 245 GATVRNSSVFLERMDYLKDREVKAKLLLERLGTHELHDLLDFYK----MMAMATSNVLEK 412
           GAT +     LER+D  K+ ++ AK       T +LH+L D  K    ++  +T  +LEK
Sbjct: 9   GATGKMGRTILERIDNFKNCKISAKF----NSTRDLHELNDLCKNSDVVIDFSTPEILEK 64

Query: 413 RQNS 424
             +S
Sbjct: 65  LVDS 68
tr_hit_id B8AD57
Definition tr|B8AD57|B8AD57_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 141
Score (bit) 90.1
E-value 1.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955593|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_I08, 5'
         (630 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8AD57|B8AD57_ORYSI Putative uncharacterized protein OS=Oryza...    90   1e-16
tr|A9SY38|A9SY38_PHYPA Predicted protein OS=Physcomitrella paten...    88   4e-16
tr|Q5ZC52|Q5ZC52_ORYSJ Putative uncharacterized protein P0443D08...    87   1e-15
tr|A7P3D5|A7P3D5_VITVI Chromosome chr1 scaffold_5, whole genome ...    85   4e-15
tr|A5BKM3|A5BKM3_VITVI Putative uncharacterized protein OS=Vitis...    85   4e-15
tr|A7PAU8|A7PAU8_VITVI Chromosome chr14 scaffold_9, whole genome...    82   3e-14
tr|A2ZP21|A2ZP21_ORYSJ Putative uncharacterized protein OS=Oryza...    80   1e-13
tr|Q9C9N8|Q9C9N8_ARATH Putative uncharacterized protein F4N21_3 ...    72   4e-11
tr|Q93Z85|Q93Z85_ARATH AT5g38200/MXA21_90 OS=Arabidopsis thalian...    71   6e-11
tr|B4FP54|B4FP54_MAIZE Putative uncharacterized protein OS=Zea m...    67   1e-09
tr|B4FH76|B4FH76_MAIZE Putative uncharacterized protein OS=Zea m...    66   2e-09
tr|Q8H0Z4|Q8H0Z4_ARATH Putative uncharacterized protein At1g1504...    58   4e-07
tr|A9P280|A9P280_PICSI Putative uncharacterized protein OS=Picea...    58   4e-07
tr|B1X2I7|B1X2I7_CYAA5 Putative uncharacterized protein OS=Cyano...    44   0.008
tr|Q8E1E1|Q8E1E1_STRA5 Protease, putative OS=Streptococcus agala...    41   0.067
tr|Q3DR84|Q3DR84_STRAG Streptococcal C5a peptidase OS=Streptococ...    41   0.067
tr|Q3DFB3|Q3DFB3_STRAG Reticulocyte binding protein OS=Streptoco...    41   0.067
tr|Q8E6V8|Q8E6V8_STRA3 Putative uncharacterized protein gbs0451 ...    40   0.12 
tr|Q3D1L9|Q3D1L9_STRAG Reticulocyte binding protein OS=Streptoco...    40   0.12 
tr|Q2L5U8|Q2L5U8_CLOPE Putative SpaB protein OS=Clostridium perf...    37   1.3  
tr|B1RK49|B1RK49_CLOPE Putative SpaB protein OS=Clostridium perf...    37   1.3  
tr|Q69U68|Q69U68_ORYSJ Putative uncharacterized protein P0015C07...    37   1.3  
tr|Q7P2X2|Q7P2X2_FUSNV Fe-S OXIDOREDUCTASE (1.8.-.-) OS=Fusobact...    35   2.8  
tr|Q3Y3W8|Q3Y3W8_ENTFC Resolvase, N-terminal:Resolvase helix-tur...    35   4.8  
tr|B0X660|B0X660_CULQU Putative uncharacterized protein OS=Culex...    35   4.8  
tr|B0WDP9|B0WDP9_CULQU Putative uncharacterized protein OS=Culex...    35   4.8  
tr|Q8ZZS3|Q8ZZS3_PYRAE Putative uncharacterized protein PAE0109 ...    35   4.8  
tr|Q3DLL7|Q3DLL7_STRAG Serine protease, subtilase family OS=Stre...    34   6.3  
tr|Q8ILR1|Q8ILR1_PLAF7 RNA helicase, putative OS=Plasmodium falc...    34   6.3  
tr|B0XES2|B0XES2_CULQU Putative uncharacterized protein OS=Culex...    34   6.3  

>tr|B8AD57|B8AD57_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_00310 PE=4 SV=1
          Length = 426

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 53/141 (37%), Positives = 79/141 (56%)
 Frame = +2

Query: 2   LDGALEKQRLKIVRSFCIAKHLYDEQLSMRRNRSMHDGMHALKVLESFQANERRYLEVGA 181
           L+  +EKQR  +VRSF +AK+LY         R                  E+R L+ GA
Sbjct: 297 LNQEMEKQRKVLVRSFSLAKNLYVSGAEAGTPRPA----------------EQRDLDAGA 340

Query: 182 NFLQSTKATLNTQQEKMLKQVGATVRNSSVFLERMDYLKDREVKAKLLLERLGTHELHDL 361
            FL+S  A L+ QQEK LKQ+GATVRN+S ++ R+   ++RE  A+ L+ ++   +L DL
Sbjct: 341 EFLESNTAALSVQQEKRLKQMGATVRNASGYINRLKLNEEREAAARALMAKMSIDQLSDL 400

Query: 362 LDFYKMMAMATSNVLEKRQNS 424
             FY +M    S VL+++ +S
Sbjct: 401 ASFYHIMGTICSEVLDRKLHS 421


>tr|A9SY38|A9SY38_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_189639 PE=4 SV=1
          Length = 454

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 52/135 (38%), Positives = 82/135 (60%)
 Frame = +2

Query: 14  LEKQRLKIVRSFCIAKHLYDEQLSMRRNRSMHDGMHALKVLESFQANERRYLEVGANFLQ 193
           +EK+R ++V SF +AK++Y+EQ   RR  S+H+   AL+ L    +  +  L +GA FL+
Sbjct: 321 IEKRRKELVYSFSLAKNMYEEQ---RRAHSVHNASIALQALSLSFSKSQHDLNLGAEFLK 377

Query: 194 STKATLNTQQEKMLKQVGATVRNSSVFLERMDYLKDREVKAKLLLERLGTHELHDLLDFY 373
              + LN QQ   L Q+GATVRNS  F   ++  + +E  A+  LE +   E+ +L +FY
Sbjct: 378 -VNSPLNKQQVNRLNQMGATVRNSKNFQLTLEIARKKESSARKWLEDMSRAEVQELHEFY 436

Query: 374 KMMAMATSNVLEKRQ 418
           +MM   +S VLE++Q
Sbjct: 437 QMMVDVSSQVLEQKQ 451


>tr|Q5ZC52|Q5ZC52_ORYSJ Putative uncharacterized protein P0443D08.44
           (Os01g0138800 protein) OS=Oryza sativa subsp. japonica
           GN=P0443D08.44 PE=4 SV=1
          Length = 431

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2   LDGALEKQRLKIVRSFCIAKHLYDEQLSMRRNRSMHDGMHALKVLESFQANERRYLEVGA 181
           L+  +EKQR  +VRSF +AK+LY         R                  E+R L+ GA
Sbjct: 301 LNQEMEKQRKVLVRSFSLAKNLYVSGAEAGTPRPA----------------EQRDLDAGA 344

Query: 182 NFL-QSTKATLNTQQEKMLKQVGATVRNSSVFLERMDYLKDREVKAKLLLERLGTHELHD 358
            FL QS  A L+ QQEK LKQ+GATVRN+S ++ R+   ++RE  A+ L+ ++   +L D
Sbjct: 345 EFLEQSNTAALSVQQEKRLKQMGATVRNASGYINRLKLNEEREAAARALMAKMSIDQLSD 404

Query: 359 LLDFYKMMAMATSNVLEKRQNS 424
           L  FY +M    S VL+++ +S
Sbjct: 405 LASFYHIMGTICSEVLDRKLHS 426


>tr|A7P3D5|A7P3D5_VITVI Chromosome chr1 scaffold_5, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00030398001
           PE=4 SV=1
          Length = 397

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 52/143 (36%), Positives = 81/143 (56%)
 Frame = +2

Query: 2   LDGALEKQRLKIVRSFCIAKHLYDEQLSMRRNRSMHDGMHALKVLESFQANERRYLEVGA 181
           LD  +EK+R  I RSF IA+ +Y  +  M                      E   LEVGA
Sbjct: 270 LDEDVEKKRKVIGRSFSIARDMYSTRRGML-------------------GEEESELEVGA 310

Query: 182 NFLQSTKATLNTQQEKMLKQVGATVRNSSVFLERMDYLKDREVKAKLLLERLGTHELHDL 361
            FL++  A L+ QQEK LKQ+GATVRN+SV++ER+   +++E  A+ ++ ++   +L ++
Sbjct: 311 KFLEANTA-LSLQQEKRLKQMGATVRNASVYMERLKMNEEKEKLARTMMGKMSIEQLSEI 369

Query: 362 LDFYKMMAMATSNVLEKRQNSGT 430
           + FY MM    S VLE++ ++ T
Sbjct: 370 VSFYHMMGRICSEVLERKLHNLT 392


>tr|A5BKM3|A5BKM3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_027946 PE=4 SV=1
          Length = 425

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 52/143 (36%), Positives = 81/143 (56%)
 Frame = +2

Query: 2   LDGALEKQRLKIVRSFCIAKHLYDEQLSMRRNRSMHDGMHALKVLESFQANERRYLEVGA 181
           LD  +EK+R  I RSF IA+ +Y  +  M                      E   LEVGA
Sbjct: 298 LDEDVEKKRKVIGRSFSIARDMYSTRRGML-------------------GEEESELEVGA 338

Query: 182 NFLQSTKATLNTQQEKMLKQVGATVRNSSVFLERMDYLKDREVKAKLLLERLGTHELHDL 361
            FL++  A L+ QQEK LKQ+GATVRN+SV++ER+   +++E  A+ ++ ++   +L ++
Sbjct: 339 KFLEANTA-LSLQQEKRLKQMGATVRNASVYMERLKMNEEKEKLARTMMGKMSIEQLSEI 397

Query: 362 LDFYKMMAMATSNVLEKRQNSGT 430
           + FY MM    S VLE++ ++ T
Sbjct: 398 VSFYHMMGRICSEVLERKLHNLT 420


>tr|A7PAU8|A7PAU8_VITVI Chromosome chr14 scaffold_9, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00038266001
           PE=4 SV=1
          Length = 208

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 53/138 (38%), Positives = 75/138 (54%)
 Frame = +2

Query: 2   LDGALEKQRLKIVRSFCIAKHLYDEQLSMRRNRSMHDGMHALKVLESFQANERRYLEVGA 181
           LD  +E +R  IVRSF IAK +Y          +   GM+  K  E         LE GA
Sbjct: 80  LDQEMENRRKIIVRSFSIAKDIY----------TTGRGMNPSKESE---------LEAGA 120

Query: 182 NFLQSTKATLNTQQEKMLKQVGATVRNSSVFLERMDYLKDREVKAKLLLERLGTHELHDL 361
            FL+S    L+ QQE  LKQ+GATVRN S + +R+   ++R+  AK L+ ++   +L +L
Sbjct: 121 EFLESN-TVLSLQQENRLKQMGATVRNGSSYFQRLKMNEERDRAAKTLMRKMSVEQLSEL 179

Query: 362 LDFYKMMAMATSNVLEKR 415
           + FY MM    S VL+K+
Sbjct: 180 MSFYHMMGQICSEVLDKK 197


>tr|A2ZP21|A2ZP21_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_000293 PE=4 SV=1
          Length = 464

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 22/163 (13%)
 Frame = +2

Query: 2   LDGALEKQRLKIVRSFCIAKHLYDE----------------------QLSMRRNRSMHDG 115
           L+  +EKQR  +VRSF +AK+LY                        ++  + N     G
Sbjct: 301 LNQEMEKQRKVLVRSFSLAKNLYVSGAEAGTPRPAEQRDLDAGAEFLEVKTQPNHRTSTG 360

Query: 116 MHALKVLESFQANERRYLEVGANFLQSTKATLNTQQEKMLKQVGATVRNSSVFLERMDYL 295
            H  +  + F+AN R  + V     QS  A L+ QQEK LKQ+GATVRN+S ++ R+   
Sbjct: 361 AHGCQPPD-FKANRRGVVCV---VQQSNTAALSVQQEKRLKQMGATVRNASGYINRLKLN 416

Query: 296 KDREVKAKLLLERLGTHELHDLLDFYKMMAMATSNVLEKRQNS 424
           ++RE  A+ L+ ++   +L DL  FY +M    S VL+++ +S
Sbjct: 417 EEREAAARALMAKMSIDQLSDLASFYHIMGTICSEVLDRKLHS 459


>tr|Q9C9N8|Q9C9N8_ARATH Putative uncharacterized protein F4N21_3
           OS=Arabidopsis thaliana GN=F4N21_3 PE=4 SV=1
          Length = 433

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 49/138 (35%), Positives = 77/138 (55%)
 Frame = +2

Query: 2   LDGALEKQRLKIVRSFCIAKHLYDEQLSMRRNRSMHDGMHALKVLESFQANERRYLEVGA 181
           L+  +E +R  +VRSF +A             RSM+   H+LK     Q+ E   LEVGA
Sbjct: 302 LNPEMENKRKILVRSFSLA-------------RSMYTRSHSLKN----QSTESE-LEVGA 343

Query: 182 NFLQSTKATLNTQQEKMLKQVGATVRNSSVFLERMDYLKDREVKAKLLLERLGTHELHDL 361
            FL+S  A L+ QQE  LK++GAT+RN   F E++   + ++ KA  +++ +    L +L
Sbjct: 344 EFLESNTA-LSVQQEMRLKEMGATMRNGGSFTEKLRLDEKKQRKAMNIMKNMNIERLSEL 402

Query: 362 LDFYKMMAMATSNVLEKR 415
           + FY +M   +S VLE++
Sbjct: 403 MAFYHLMGKISSEVLERK 420


>tr|Q93Z85|Q93Z85_ARATH AT5g38200/MXA21_90 OS=Arabidopsis thaliana
           PE=2 SV=1
          Length = 266

 Score = 70.9 bits (172), Expect = 6e-11
 Identities = 40/138 (28%), Positives = 76/138 (55%)
 Frame = +2

Query: 2   LDGALEKQRLKIVRSFCIAKHLYDEQLSMRRNRSMHDGMHALKVLESFQANERRYLEVGA 181
           LD  +E +R  +VRSF +AK++Y                  ++       ++   LEVGA
Sbjct: 136 LDSEMENKRKMLVRSFSLAKYMY------------------VRGAPGKNPSKESELEVGA 177

Query: 182 NFLQSTKATLNTQQEKMLKQVGATVRNSSVFLERMDYLKDREVKAKLLLERLGTHELHDL 361
            FL+S  A L+ +QE  LK++GATVRN   +++++   +D++  A+ +++++   +L +L
Sbjct: 178 EFLESNTA-LSAEQEMRLKEMGATVRNGGSYMKKLKVDEDKQRMARNMMKKMNIEQLSEL 236

Query: 362 LDFYKMMAMATSNVLEKR 415
           + FY +M      VL+++
Sbjct: 237 MAFYHLMGNICGEVLDRK 254


>tr|B4FP54|B4FP54_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 421

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 45/138 (32%), Positives = 68/138 (49%)
 Frame = +2

Query: 2   LDGALEKQRLKIVRSFCIAKHLYDEQLSMRRNRSMHDGMHALKVLESFQANERRYLEVGA 181
           L   + ++R  I RSF +A  +Y              G H        +  E+R  E GA
Sbjct: 300 LSKEMMRRRKVIPRSFSLAMDMY------------LSGSHT-------KPAEKRDHEAGA 340

Query: 182 NFLQSTKATLNTQQEKMLKQVGATVRNSSVFLERMDYLKDREVKAKLLLERLGTHELHDL 361
            FL+S  A+++  QEK LKQ+GAT RN+S +L  +     RE  A+ L+  +  ++L DL
Sbjct: 341 EFLESNTASVSAWQEKRLKQMGATARNASGYLNSVKVNGVREAAARALMAEMSVNQLSDL 400

Query: 362 LDFYKMMAMATSNVLEKR 415
             FY+ M    S VL+ +
Sbjct: 401 ATFYQTMGKICSEVLDTK 418