BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955598|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_I13, 5'
         (549 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A2C5T5|MUTS_PROM3 DNA mismatch repair protein mutS OS=Prochlo...    31   3.4  
sp|Q7V978|MUTS_PROMM DNA mismatch repair protein mutS OS=Prochlo...    30   5.9  

>sp|A2C5T5|MUTS_PROM3 DNA mismatch repair protein mutS
           OS=Prochlorococcus marinus (strain MIT 9303) GN=mutS
           PE=3 SV=1
          Length = 927

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
 Frame = -3

Query: 217 PFLGE*AGKRKESHVRHMIERENLSGALLRVIYPRGERMRKAHRS----HGQRELLA 59
           P L   A + +++ V H++E  +L  +L R++ P G+  R A R+     G REL+A
Sbjct: 418 PLLDSKAIRARQAVVNHLVETRSLRHSLRRLLRPMGDLERLAGRAGAGHAGARELVA 474


>sp|Q7V978|MUTS_PROMM DNA mismatch repair protein mutS
           OS=Prochlorococcus marinus (strain MIT 9313) GN=mutS
           PE=3 SV=1
          Length = 927

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
 Frame = -3

Query: 217 PFLGE*AGKRKESHVRHMIERENLSGALLRVIYPRGERMRKAHRS----HGQRELLA 59
           P L   A + +++ V H++E  +L  +L R + P G+  R A R+     G REL+A
Sbjct: 418 PLLDSKAIRARQAVVNHLVETRSLRHSLRRFLRPMGDLERLAGRAGAGHAGARELVA 474

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955598|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_I13, 5'
         (549 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9QKD0|Q9QKD0_9VIRU Glycine and proline-rich protein P69 OS=H...    34   4.5  
tr|Q2J696|Q2J696_FRASC Glycosyl transferase, family 2 OS=Frankia...    33   7.5  
tr|B1ZCA4|B1ZCA4_METPB FAD dependent oxidoreductase OS=Methyloba...    33   7.5  
tr|A2G112|A2G112_TRIVA Putative uncharacterized protein OS=Trich...    33   7.5  

>tr|Q9QKD0|Q9QKD0_9VIRU Glycine and proline-rich protein P69
           OS=Hyposoter didymator virus GN=P69 PE=2 SV=1
          Length = 683

 Score = 34.3 bits (77), Expect = 4.5
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +1

Query: 244 GKRSRSWGMRPVRRPSVAALEASYKGEGDKK*GARGRLQTQDGSW 378
           G R+   G  PV  P+  A+     G GD      GR+Q +DGSW
Sbjct: 249 GPRAYRGGRPPVPMPAAGAVPPRLGGGGDSMGPGTGRVQLEDGSW 293


>tr|Q2J696|Q2J696_FRASC Glycosyl transferase, family 2 OS=Frankia
           sp. (strain CcI3) GN=Francci3_3846 PE=4 SV=1
          Length = 311

 Score = 33.5 bits (75), Expect = 7.5
 Identities = 23/76 (30%), Positives = 35/76 (46%)
 Frame = +3

Query: 171 LTWLSFLLPAYSPKKGQIASHGCCWQEIEELGNAAGEKTERRSIGSILQRGGGQEMRSEG 350
           LTW  F    Y+  KG++A+          +G+AA    ERR +   L  G  +E+R+  
Sbjct: 223 LTWRYFWKRCYTVNKGKVAA-------FRGMGSAASMAAERRFVAQTLSGGLARELRAVR 275

Query: 351 *TPDTGRVMVQTRLAG 398
               +G +   T LAG
Sbjct: 276 AGELSGALRSATMLAG 291


>tr|B1ZCA4|B1ZCA4_METPB FAD dependent oxidoreductase
           OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB
           13946 / BJ001) GN=Mpop_2640 PE=4 SV=1
          Length = 366

 Score = 33.5 bits (75), Expect = 7.5
 Identities = 22/73 (30%), Positives = 33/73 (45%)
 Frame = +3

Query: 180 LSFLLPAYSPKKGQIASHGCCWQEIEELGNAAGEKTERRSIGSILQRGGGQEMRSEG*TP 359
           LS +   +SP  G + SH      + ++ +A G    R  I +  +R GG ++R  G  P
Sbjct: 129 LSCVAALHSPATGIVDSHALMLSLLGDIEDAGGVLALRTPIDAAERRDGGWQVRFGGEAP 188

Query: 360 DTGRVMVQTRLAG 398
           D  RV      AG
Sbjct: 189 DVLRVDCLVNAAG 201


>tr|A2G112|A2G112_TRIVA Putative uncharacterized protein
           OS=Trichomonas vaginalis G3 GN=TVAG_409320 PE=4 SV=1
          Length = 1457

 Score = 33.5 bits (75), Expect = 7.5
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +3

Query: 213 KGQIASHGCCWQEIEELGNAAGEKTERRSIGSILQRGGGQEMR 341
           KG IA+H  CW E+++L NA    T   ++  +++R  G+ +R
Sbjct: 569 KGMIANHQFCWDELQDLLNA----TSAENVPIVVKRAAGEFIR 607