DK955602 |
Clone id |
TST39A01NGRL0023_I17 |
Library |
TST39 |
Length |
574 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_I17. 5' end sequence. |
Accession |
DK955602 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GAAAAACGTATACAAGTGCCTTAGGGAAGAAGGAACTGTTGGATGGAGGGGGTGGAGAGC CCTTGGTTGATGACAATGTCAGAATGGCCTCAACAATGACAAATCAGGAACTTATTGATG GTGGTAATAAAACCATGGATGAAACTGACCAGGCAATTGAAAGATCTAAGAAGGTTGTAG AGGATACTGTCAACATTGGTGCACAGACGGCACAGACCTTGAAGGCTCAGACCGAACAAA TGGGACGAATCGTCAATGAGTTGGACACGATTCAGTTTTCCATAAAGAAAGCGTCGCAGC TTGTAAGAGAAATTGGCAGACAGATTGCGACAGACCGTTGCATTATGATGTTTCTCTTTT TGGTTGTTTGTGGAGTTATTGCTATCATAATTGTCAAGATTGTTCATCCAAACAACAAGA ATATACAAGACATTCCCGGGCTGGCACCTCCTGCAAATGGTAGCAGTCGGCGACTATTGG CAGCGTTCGACATTTAGCGGCGAACATGAAGTCTTTTCATGTGACTGAGCTTAGCATGTG GAGAAGTGGCTGTGGTTGCATGCGCTCCCCTGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LNH6 |
Definition |
sp|Q9LNH6|NPS12_ARATH Novel plant SNARE 12 OS=Arabidopsis thaliana |
Align length |
137 |
Score (bit) |
208.0 |
E-value |
1.0e-53 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NYG3 |
Definition |
tr|A9NYG3|A9NYG3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
137 |
Score (bit) |
219.0 |
E-value |
8.0e-56 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955602|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_I17, 5' (574 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NYG3|A9NYG3_PICSI Putative uncharacterized protein OS=Picea... 219 8e-56 tr|A7NVY7|A7NVY7_VITVI Chromosome chr5 scaffold_2, whole genome ... 213 6e-54 tr|Q541Y4|Q541Y4_ARATH Putative uncharacterized protein At1g4824... 208 1e-52 tr|A7PCH7|A7PCH7_VITVI Chromosome chr2 scaffold_11, whole genome... 199 9e-50 tr|A5C1H1|A5C1H1_VITVI Putative uncharacterized protein OS=Vitis... 199 9e-50 tr|B4FSW7|B4FSW7_MAIZE Putative uncharacterized protein OS=Zea m... 199 1e-49 tr|B6TAD9|B6TAD9_MAIZE Novel plant SNARE 11 OS=Zea mays PE=2 SV=1 196 1e-48 tr|B4FFR4|B4FFR4_MAIZE Putative uncharacterized protein OS=Zea m... 196 1e-48 tr|Q5Z9Q1|Q5Z9Q1_ORYSJ cDNA clone:001-019-G10, full insert seque... 193 6e-48 tr|B8B2I1|B8B2I1_ORYSI Putative uncharacterized protein OS=Oryza... 193 6e-48 tr|Q8H5R6|Q8H5R6_ORYSJ Os07g0637400 protein OS=Oryza sativa subs... 192 1e-47 tr|Q5XQQ5|Q5XQQ5_ORYSJ SNARE 13 OS=Oryza sativa subsp. japonica ... 192 1e-47 tr|B6U1B4|B6U1B4_MAIZE Novel plant SNARE 11 OS=Zea mays PE=2 SV=1 190 4e-47 tr|Q9FRD2|Q9FRD2_ORYSA Putative vesicle soluble NSF attachment p... 189 9e-47 tr|Q10KU8|Q10KU8_ORYSJ Os03g0369800 protein OS=Oryza sativa subs... 189 9e-47 tr|A2XH67|A2XH67_ORYSI Putative uncharacterized protein OS=Oryza... 189 9e-47 tr|Q5XQQ6|Q5XQQ6_ORYSJ SNARE 12 OS=Oryza sativa subsp. japonica ... 187 3e-46 tr|B8B522|B8B522_ORYSI Putative uncharacterized protein OS=Oryza... 182 9e-45 tr|A9SQW5|A9SQW5_PHYPA Qb-SNARE, NPSN1-family OS=Physcomitrella ... 180 6e-44 tr|A3BMM0|A3BMM0_ORYSJ Putative uncharacterized protein OS=Oryza... 174 2e-42 tr|A3BFE0|A3BFE0_ORYSJ Putative uncharacterized protein OS=Oryza... 171 3e-41 tr|A5C3A4|A5C3A4_VITVI Putative uncharacterized protein OS=Vitis... 134 4e-30 tr|Q2V2S5|Q2V2S5_ARATH Uncharacterized protein At3g17440.2 OS=Ar... 129 2e-28 tr|A9S9X3|A9S9X3_PHYPA Predicted protein OS=Physcomitrella paten... 124 3e-27 tr|B4FEF9|B4FEF9_MAIZE Putative uncharacterized protein OS=Zea m... 120 4e-26 tr|Q5Z9Q0|Q5Z9Q0_ORYSJ Os06g0715100 protein OS=Oryza sativa subs... 118 3e-25 tr|A4S6J0|A4S6J0_OSTLU Predicted protein (Fragment) OS=Ostreococ... 110 7e-23 tr|A6MZI1|A6MZI1_ORYSI Novel plant snare 11 (Fragment) OS=Oryza ... 109 9e-23 tr|Q00X15|Q00X15_OSTTA Putative NPSN12 (ISS) OS=Ostreococcus tau... 107 6e-22 tr|A8ITN9|A8ITN9_CHLRE Qb-SNARE protein, NPSN-family OS=Chlamydo... 105 2e-21
>tr|A9NYG3|A9NYG3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 273
Score = 219 bits (558), Expect = 8e-56 Identities = 109/137 (79%), Positives = 128/137 (93%) Frame = +3
Query: 69 DDNVRMASTMTNQELIDGGNKTMDETDQAIERSKKVVEDTVNIGAQTAQTLKAQTEQMGR 248 ++NVR+AS+MTNQEL++GG K MDETDQ IERSKKVVE+TVN+GAQTA TLK+QTEQMGR Sbjct: 126 EENVRVASSMTNQELVEGGTKMMDETDQTIERSKKVVEETVNVGAQTAATLKSQTEQMGR 185
Query: 249 IVNELDTIQFSIKKASQLVREIGRQIATDRCIMMFLFLVVCGVIAIIIVKIVHPNNKNIQ 428 IVNELDTIQFSIKKA+QLV+EIGRQ+ATDRCIM FLFL+VCGVIAII+VKIV+P NK+I+ Sbjct: 186 IVNELDTIQFSIKKATQLVKEIGRQVATDRCIMAFLFLIVCGVIAIIVVKIVNPKNKSIR 245
Query: 429 DIPGLAPPANGSSRRLL 479 DIPGLAPP +SR+LL Sbjct: 246 DIPGLAPPV--ASRKLL 260
>tr|A7NVY7|A7NVY7_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019715001 PE=4 SV=1 Length = 269
Score = 213 bits (542), Expect = 6e-54 Identities = 107/137 (78%), Positives = 124/137 (90%) Frame = +3
Query: 69 DDNVRMASTMTNQELIDGGNKTMDETDQAIERSKKVVEDTVNIGAQTAQTLKAQTEQMGR 248 DDNV++AS+M+NQELI GNKTMDETDQ IERSK+VV T+ +G TA TLK QT+QMGR Sbjct: 126 DDNVQVASSMSNQELIQAGNKTMDETDQTIERSKQVVAQTIEVGTGTAVTLKGQTDQMGR 185
Query: 249 IVNELDTIQFSIKKASQLVREIGRQIATDRCIMMFLFLVVCGVIAIIIVKIVHPNNKNIQ 428 IVNELDTIQFSIKKASQLV+EIGRQ+ATD+CIM+FLFL+VCGVIAIIIVKIV+PNNK+I+ Sbjct: 186 IVNELDTIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIIVKIVNPNNKSIK 245
Query: 429 DIPGLAPPANGSSRRLL 479 D+PGLAPPA SRRLL Sbjct: 246 DVPGLAPPA--PSRRLL 260
>tr|Q541Y4|Q541Y4_ARATH Putative uncharacterized protein At1g48240/F21D18_3 OS=Arabidopsis thaliana GN=At1g48240/F21D18_3 PE=2 SV=1 Length = 265
Score = 208 bits (530), Expect = 1e-52 Identities = 103/137 (75%), Positives = 123/137 (89%) Frame = +3
Query: 69 DDNVRMASTMTNQELIDGGNKTMDETDQAIERSKKVVEDTVNIGAQTAQTLKAQTEQMGR 248 ++NV+MASTM+NQEL+D G K MDETDQAIERSK+VV T+ +G QTA LK QT+QMGR Sbjct: 127 EENVQMASTMSNQELVDAGMKRMDETDQAIERSKQVVHQTLEVGTQTASNLKGQTDQMGR 186
Query: 249 IVNELDTIQFSIKKASQLVREIGRQIATDRCIMMFLFLVVCGVIAIIIVKIVHPNNKNIQ 428 +VN+LDTIQFS+KKASQLV+EIGRQ+ATD+CIM FLFL+VCGVIAIIIVKIV+PNNK+I+ Sbjct: 187 VVNDLDTIQFSLKKASQLVKEIGRQVATDKCIMAFLFLIVCGVIAIIIVKIVNPNNKDIR 246
Query: 429 DIPGLAPPANGSSRRLL 479 DIPGLAPPA SR+LL Sbjct: 247 DIPGLAPPA--QSRKLL 261
>tr|A7PCH7|A7PCH7_VITVI Chromosome chr2 scaffold_11, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015866001 PE=4 SV=1 Length = 261
Score = 199 bits (506), Expect = 9e-50 Identities = 98/137 (71%), Positives = 122/137 (89%) Frame = +3
Query: 69 DDNVRMASTMTNQELIDGGNKTMDETDQAIERSKKVVEDTVNIGAQTAQTLKAQTEQMGR 248 ++NV +AS+MTNQ+L+D GN+ MDETDQ IERSKKVV+DTVN+G +TA LK+QTEQM R Sbjct: 123 EENVLLASSMTNQQLMDNGNRMMDETDQVIERSKKVVQDTVNVGTETAAALKSQTEQMSR 182
Query: 249 IVNELDTIQFSIKKASQLVREIGRQIATDRCIMMFLFLVVCGVIAIIIVKIVHPNNKNIQ 428 IVNELD+I FSIKKASQLV+EIGRQ+ATDRCIM LF++V GVIA+IIVK+V+PNNK+I+ Sbjct: 183 IVNELDSIHFSIKKASQLVKEIGRQVATDRCIMALLFILVIGVIAVIIVKLVNPNNKDIR 242
Query: 429 DIPGLAPPANGSSRRLL 479 D+PGLAPPA +R+LL Sbjct: 243 DVPGLAPPA--LTRKLL 257
>tr|A5C1H1|A5C1H1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030969 PE=4 SV=1 Length = 261
Score = 199 bits (506), Expect = 9e-50 Identities = 98/137 (71%), Positives = 122/137 (89%) Frame = +3
Query: 69 DDNVRMASTMTNQELIDGGNKTMDETDQAIERSKKVVEDTVNIGAQTAQTLKAQTEQMGR 248 ++NV +AS+MTNQ+L+D GN+ MDETDQ IERSKKVV+DTVN+G +TA LK+QTEQM R Sbjct: 123 EENVLLASSMTNQQLMDNGNRMMDETDQVIERSKKVVQDTVNVGTETAAALKSQTEQMSR 182
Query: 249 IVNELDTIQFSIKKASQLVREIGRQIATDRCIMMFLFLVVCGVIAIIIVKIVHPNNKNIQ 428 IVNELD+I FSIKKASQLV+EIGRQ+ATDRCIM LF++V GVIA+IIVK+V+PNNK+I+ Sbjct: 183 IVNELDSIHFSIKKASQLVKEIGRQVATDRCIMALLFILVIGVIAVIIVKLVNPNNKDIR 242
Query: 429 DIPGLAPPANGSSRRLL 479 D+PGLAPPA +R+LL Sbjct: 243 DVPGLAPPA--LTRKLL 257
>tr|B4FSW7|B4FSW7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 275
Score = 199 bits (505), Expect = 1e-49 Identities = 103/142 (72%), Positives = 117/142 (82%), Gaps = 3/142 (2%) Frame = +3
Query: 69 DDNVRMASTMTNQELIDGGNKTMDETDQAIERSKKVVEDTVNIGAQTAQTLKAQTEQMGR 248 +DN++MAS MTNQ+LID G MD+TDQAIERSK VV TV GAQTA TL QTEQM R Sbjct: 128 EDNIQMASAMTNQQLIDTGRNQMDQTDQAIERSKMVVAQTVETGAQTAATLTQQTEQMKR 187
Query: 249 IVNELDTIQFSIKKASQLVREIGRQIATDRCIMMFLFLVVCGVIAIIIVKIVHPNNKNIQ 428 I NELDT+ FS+KKASQLV+EIGRQ+ATD+CIM FLFL+V GVIAII+VKIVHPNNKNI+ Sbjct: 188 IGNELDTVHFSLKKASQLVKEIGRQVATDKCIMAFLFLIVLGVIAIIVVKIVHPNNKNIR 247
Query: 429 DIPGLAPPANG---SSRRLLAA 485 DIPGLAPPA +RRLL A Sbjct: 248 DIPGLAPPAQNYQIHNRRLLWA 269
>tr|B6TAD9|B6TAD9_MAIZE Novel plant SNARE 11 OS=Zea mays PE=2 SV=1 Length = 256
Score = 196 bits (497), Expect = 1e-48 Identities = 99/137 (72%), Positives = 119/137 (86%) Frame = +3
Query: 69 DDNVRMASTMTNQELIDGGNKTMDETDQAIERSKKVVEDTVNIGAQTAQTLKAQTEQMGR 248 ++NV +AS MTNQ+L+D GN+ MDETDQAI RSK+ V++TVN+G +TA LKAQTEQM R Sbjct: 122 EENVLLASNMTNQQLMDQGNQLMDETDQAIARSKQTVQETVNVGTETAAALKAQTEQMSR 181
Query: 249 IVNELDTIQFSIKKASQLVREIGRQIATDRCIMMFLFLVVCGVIAIIIVKIVHPNNKNIQ 428 +VNELD+I FSIKKASQLV+EIGRQ+ATDRCIM LFL+V GVIAIIIVKIV+P+NK+I+ Sbjct: 182 VVNELDSIHFSIKKASQLVKEIGRQVATDRCIMAMLFLIVAGVIAIIIVKIVNPHNKDIR 241
Query: 429 DIPGLAPPANGSSRRLL 479 DIPGLAPP SRRLL Sbjct: 242 DIPGLAPPV---SRRLL 255
>tr|B4FFR4|B4FFR4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 256
Score = 196 bits (497), Expect = 1e-48 Identities = 99/137 (72%), Positives = 119/137 (86%) Frame = +3
Query: 69 DDNVRMASTMTNQELIDGGNKTMDETDQAIERSKKVVEDTVNIGAQTAQTLKAQTEQMGR 248 ++NV +AS MTNQ+L+D GN+ MDETDQAI RSK+ V++TVN+G +TA LKAQTEQM R Sbjct: 122 EENVLLASNMTNQQLMDQGNQLMDETDQAIARSKQTVQETVNVGTETAAALKAQTEQMSR 181
Query: 249 IVNELDTIQFSIKKASQLVREIGRQIATDRCIMMFLFLVVCGVIAIIIVKIVHPNNKNIQ 428 +VNELD+I FSIKKASQLV+EIGRQ+ATDRCIM LFL+V GVIAIIIVKIV+P+NK+I+ Sbjct: 182 VVNELDSIHFSIKKASQLVKEIGRQVATDRCIMAMLFLIVAGVIAIIIVKIVNPHNKDIR 241
Query: 429 DIPGLAPPANGSSRRLL 479 DIPGLAPP SRRLL Sbjct: 242 DIPGLAPPV---SRRLL 255
>tr|Q5Z9Q1|Q5Z9Q1_ORYSJ cDNA clone:001-019-G10, full insert sequence OS=Oryza sativa subsp. japonica GN=P0481E08.11-2 PE=2 SV=1 Length = 261
Score = 193 bits (490), Expect = 6e-48 Identities = 96/138 (69%), Positives = 118/138 (85%) Frame = +3
Query: 69 DDNVRMASTMTNQELIDGGNKTMDETDQAIERSKKVVEDTVNIGAQTAQTLKAQTEQMGR 248 ++NV +AS MTNQ+L+D GN+ MDETDQAI RSK+ V++T+N+G +TA LK+QTEQM R Sbjct: 122 EENVLLASNMTNQQLMDQGNQLMDETDQAIARSKQTVQETINVGTETAAALKSQTEQMSR 181
Query: 249 IVNELDTIQFSIKKASQLVREIGRQIATDRCIMMFLFLVVCGVIAIIIVKIVHPNNKNIQ 428 IVNELD+I FSIKKASQ+V+EIGRQ+ATDRCIM LFL+V GVIAII+VKIV+P NK I+ Sbjct: 182 IVNELDSIHFSIKKASQMVKEIGRQVATDRCIMALLFLIVAGVIAIIVVKIVNPQNKTIR 241
Query: 429 DIPGLAPPANGSSRRLLA 482 DIPGLAPP SRRLL+ Sbjct: 242 DIPGLAPPV---SRRLLS 256
>tr|B8B2I1|B8B2I1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24460 PE=4 SV=1 Length = 261
Score = 193 bits (490), Expect = 6e-48 Identities = 96/138 (69%), Positives = 118/138 (85%) Frame = +3
Query: 69 DDNVRMASTMTNQELIDGGNKTMDETDQAIERSKKVVEDTVNIGAQTAQTLKAQTEQMGR 248 ++NV +AS MTNQ+L+D GN+ MDETDQAI RSK+ V++T+N+G +TA LK+QTEQM R Sbjct: 122 EENVLLASNMTNQQLMDQGNQLMDETDQAIARSKQTVQETINVGTETAAALKSQTEQMSR 181
Query: 249 IVNELDTIQFSIKKASQLVREIGRQIATDRCIMMFLFLVVCGVIAIIIVKIVHPNNKNIQ 428 IVNELD+I FSIKKASQ+V+EIGRQ+ATDRCIM LFL+V GVIAII+VKIV+P NK I+ Sbjct: 182 IVNELDSIHFSIKKASQMVKEIGRQVATDRCIMALLFLIVAGVIAIIVVKIVNPQNKTIR 241
Query: 429 DIPGLAPPANGSSRRLLA 482 DIPGLAPP SRRLL+ Sbjct: 242 DIPGLAPPV---SRRLLS 256
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