DK955614 |
Clone id |
TST39A01NGRL0023_J05 |
Library |
TST39 |
Length |
630 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_J05. 5' end sequence. |
Accession |
DK955614 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL240Contig1 |
Sequence |
CCCCTCCCGCTTTTTCCGCACAGATGGCTACTACGGCTCCGTCCTCATCTACCAAAGCGC TCCATTCATCATCGTGGCCCTCCTCAGCCTCGTCGTCGTCGAGCTCAGGAAGAAGTTGAA TTCCTCATCAAGCCATGAAACTGAAAAGGGAATAAGCAAAAGCTCTCCAAGTCTCACGAC TTACCCGCTCGTGATCAAGAGTTTCATGGGAGTGCTCACAAGTGCAGACGTTCTCTTCAT TCTAGGGATCCTCTTCCTTGTCGCCTACACTTTTGGGAGACAATGCCACTTGTCCTTCCA AGACCTTGAGAGAGAATATAAGGAGAACCCTAGCGAATTCGATGACTCTTTGGTGATCAT AAAGTTTGCATATGCTGCTTATTACATGGGACGATCGGCTATGATACCATTTTCTCTGCT TTGGATCCCTGTATCAAGAGGATCTCCTTTCTTAAGATTGATCAACATGCCTTTTGAGCA TGCTGTCAAATATCACATTTGGTTGTCCATGTTGTCTCTCTTCATGTTGACTCTCCACGG AATCTTGTATATAGTATACTATGTGGGTGCCGACGAAGCCAAAGCGGTAATCACTCTGTG ATCGTGTGCGCGTGTGTGTTTTGACATCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZLR4 |
Definition |
sp|Q9ZLR4|Y567_HELPJ UPF0118 membrane protein jhp_0514 OS=Helicobacter pylori J99 |
Align length |
123 |
Score (bit) |
34.3 |
E-value |
0.54 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SL39 |
Definition |
tr|A9SL39|A9SL39_PHYPA Ferric reductase-like transmembrane component OS=Physcomitrella patens subsp. patens |
Align length |
190 |
Score (bit) |
105.0 |
E-value |
2.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955614|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_J05, 5' (630 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SL39|A9SL39_PHYPA Ferric reductase-like transmembrane compo... 105 2e-21 tr|A9U5F8|A9U5F8_PHYPA Ferric reductase-like transmembrane compo... 97 8e-19 tr|A9S0A4|A9S0A4_PHYPA Ferric reductase like transmembrane compo... 95 4e-18 tr|A5C425|A5C425_VITVI Putative uncharacterized protein OS=Vitis... 93 1e-17 tr|A7PZM2|A7PZM2_VITVI Chromosome chr15 scaffold_40, whole genom... 93 1e-17 tr|A7R0A2|A7R0A2_VITVI Chromosome undetermined scaffold_301, who... 92 3e-17 tr|Q6T303|Q6T303_MEDTR Ferric reductase OS=Medicago truncatula G... 91 4e-17 tr|A9RKK9|A9RKK9_PHYPA Ferric reductase like transmembrane compo... 89 3e-16 tr|B8A3B5|B8A3B5_MAIZE Putative uncharacterized protein OS=Zea m... 88 4e-16 tr|A7PZM1|A7PZM1_VITVI Chromosome chr15 scaffold_40, whole genom... 88 4e-16 tr|A5ATI3|A5ATI3_VITVI Putative uncharacterized protein OS=Vitis... 88 4e-16 tr|B6SW74|B6SW74_MAIZE Ferric reductase-like transmembrane compo... 88 5e-16 tr|Q7XUW2|Q7XUW2_ORYSJ OSJNBa0027P08.6 protein OS=Oryza sativa s... 86 1e-15 tr|Q6L8G3|Q6L8G3_ORYSJ Ferric reductase OS=Oryza sativa subsp. j... 86 1e-15 tr|Q0JCX7|Q0JCX7_ORYSJ Os04g0444800 protein OS=Oryza sativa subs... 86 1e-15 tr|B8AUC6|B8AUC6_ORYSI Putative uncharacterized protein OS=Oryza... 86 1e-15 tr|A3AU74|A3AU74_ORYSJ Putative uncharacterized protein OS=Oryza... 86 1e-15 tr|Q6EMC0|Q6EMC0_SOLLC Ferric-chelate reductase OS=Solanum lycop... 86 2e-15 tr|Q94EK6|Q94EK6_PEA Ferric-chelate reductase (Iron reductase) O... 85 3e-15 tr|Q2HST1|Q2HST1_MEDTR Ferric reductase-like transmembrane compo... 85 4e-15 tr|Q9LMM3|Q9LMM3_ARATH F22L4.12 protein OS=Arabidopsis thaliana ... 84 7e-15 tr|P92949|P92949_ARATH FRO2 protein (Ferric-chelate reductase) O... 84 7e-15 tr|Q6PND7|Q6PND7_CUCSA Ferric reductase OS=Cucumis sativus PE=2 ... 83 2e-14 tr|Q3KTM0|Q3KTM0_ARATH FRO1-like protein OS=Arabidopsis thaliana... 82 2e-14 tr|A9S7N1|A9S7N1_PHYPA Ferric reductase-like transmembrane compo... 82 2e-14 tr|Q5XMI8|Q5XMI8_PEA Iron reductase OS=Pisum sativum GN=FRO1 PE=... 81 5e-14 tr|A7QG55|A7QG55_VITVI Chromosome undetermined scaffold_91, whol... 81 5e-14 tr|A7PCT0|A7PCT0_VITVI Chromosome chr17 scaffold_12, whole genom... 80 8e-14 tr|A5BMV8|A5BMV8_VITVI Putative uncharacterized protein OS=Vitis... 79 2e-13 tr|A5BJK1|A5BJK1_VITVI Putative uncharacterized protein OS=Vitis... 79 3e-13
>tr|A9SL39|A9SL39_PHYPA Ferric reductase-like transmembrane component OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165498 PE=4 SV=1 Length = 760
Score = 105 bits (263), Expect = 2e-21 Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 5/190 (2%) Frame = +2
Query: 35 GSVLIYQSAPFIIVALLSLVVVELRKKLNS---SSSHETEKGISKSSPSLTTYPLVIKSF 205 G + S P I+ AL +L+ +E+ ++L + SS + K + L T P+++KS Sbjct: 56 GPFFLMWSFPVILFALFALLYLEVDQRLKAKKESSCTDVPKW-KRVWLRLRTQPILVKSL 114
Query: 206 MGVLTSADVLFILGILFLVAYTFGRQCHLSFQDLEREYKENPSEFDDSLVIIKFAYAAYY 385 +GVLT D+L I ++F + F + ++++R N + +IK + Sbjct: 115 LGVLTGVDLLVISFVVFATMWIFVKPLIPMLEEVDR----NTMKPGIDRWMIKVGRVGTW 170
Query: 386 MGRSAMIPFSLLWIPVSRGSPFLRLINMPFEHAVKYHIWLSMLSLFMLTLHGILYI--VY 559 GR+ +P +LL+IPVSR SPFLRL+N+P+EHAV+ H WL SL +L LH I + +Y Sbjct: 171 TGRAWYLPMALLFIPVSRNSPFLRLVNLPYEHAVRLHRWLGHFSLVILLLHSITFSLHIY 230
Query: 560 YVGADEAKAV 589 Y G K + Sbjct: 231 YTGGGSVKGI 240
>tr|A9U5F8|A9U5F8_PHYPA Ferric reductase-like transmembrane component OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_173734 PE=4 SV=1 Length = 782
Score = 97.1 bits (240), Expect = 8e-19 Identities = 58/185 (31%), Positives = 106/185 (57%) Frame = +2
Query: 35 GSVLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKSSPSLTTYPLVIKSFMGV 214 G +L+ ++P +++ LL+++ +E+ ++ + + + +K SL +PL I +MG+ Sbjct: 100 GGLLVLFASPLLVLTLLAIINLEVSSRMVTFNREK-----AKGRASLQKHPLFIGGWMGI 154
Query: 215 LTSADVLFILGILFLVAYTFGRQCHLSFQDLEREYKENPSEFDDSLVIIKFAYAAYYMGR 394 +++A+ L+IL LFLV +T+ +L +D R + + +++ K A ++G Sbjct: 155 VSAAEFLWIL--LFLVMFTWIMGNYL-IRD-SRHFDVTSLKPVETVWSKKLKRTASHLGF 210
Query: 395 SAMIPFSLLWIPVSRGSPFLRLINMPFEHAVKYHIWLSMLSLFMLTLHGILYIVYYVGAD 574 +I + L++PVSRGS LR +++PFEHAVKYHIWL + TLHG YI+ + D Sbjct: 211 FGLICLNFLFLPVSRGSVLLRALDIPFEHAVKYHIWLGYFMMTCFTLHGHFYIIAWYSED 270
Query: 575 EAKAV 589 + Sbjct: 271 SLSKI 275
>tr|A9S0A4|A9S0A4_PHYPA Ferric reductase like transmembrane component OS=Physcomitrella patens subsp. patens GN=FRO1 PE=4 SV=1 Length = 761
Score = 94.7 bits (234), Expect = 4e-18 Identities = 55/177 (31%), Positives = 96/177 (54%) Frame = +2
Query: 26 GYYGSVLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKSSPSLTTYPLVIKSF 205 G G++LI+ APF+++ + S+ +E+ SS K ++ L P++ + Sbjct: 77 GLNGTILIFFGAPFLLLTVFSIASLEV------SSHSPVSKKKARGRAPLKAQPVITEGL 130
Query: 206 MGVLTSADVLFILGILFLVAYTFGRQCHLSFQDLEREYKENPSEFDDSLVIIKFAYAAYY 385 MG++++A++L+I+ L + + F+ E E K P E S+ K + Sbjct: 131 MGMVSAAELLWIVFFLAMCLWIMANYLVPDFKRAETE-KLKPYE---SVWGNKIKFIGLR 186
Query: 386 MGRSAMIPFSLLWIPVSRGSPFLRLINMPFEHAVKYHIWLSMLSLFMLTLHGILYIV 556 +G ++ +LL++PV+RGS LR I++PFEHA KYH+WL + + TLHG+ Y V Sbjct: 187 LGFIGIVCLNLLFLPVARGSVMLRAIDIPFEHATKYHVWLGHFMMAVFTLHGVFYAV 243
>tr|A5C425|A5C425_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035329 PE=4 SV=1 Length = 694
Score = 93.2 bits (230), Expect = 1e-17 Identities = 53/181 (29%), Positives = 102/181 (56%), Gaps = 4/181 (2%) Frame = +2
Query: 26 GYYGSVLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKSSPS--LTTYPLVIK 199 G GS+ + S P +I+A L++V + + + S E ++ + + P L T+P+++ Sbjct: 68 GITGSIFLVFSGPILIIAFLAIVYLVI----SDSGEEELQEKRTSNCPRFRLWTFPVLVD 123
Query: 200 SFMGVLTSADVLFILGILFLVAYTFGRQCHLSFQD--LEREYKENPSEFDDSLVIIKFAY 373 GV+++A+ +GIL + + C + ++ L E+ + PS+ L++ Sbjct: 124 GPFGVVSAAE---FIGILLFIVFIIWAVCSYTLKNFSLLAEF-QLPSKLQCYLML---EL 176
Query: 374 AAYYMGRSAMIPFSLLWIPVSRGSPFLRLINMPFEHAVKYHIWLSMLSLFMLTLHGILYI 553 + G + + L++P++RGS LRL+++PFEHA KYH+WL L++F+ TLHG+ Y+ Sbjct: 177 SGLRFGLIGLFCXAFLFLPIARGSVLLRLVDIPFEHATKYHVWLGHLTMFLFTLHGLFYV 236
Query: 554 V 556 + Sbjct: 237 I 237
>tr|A7PZM2|A7PZM2_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026930001 PE=4 SV=1 Length = 715
Score = 92.8 bits (229), Expect = 1e-17 Identities = 53/182 (29%), Positives = 95/182 (52%), Gaps = 2/182 (1%) Frame = +2
Query: 26 GYYGSVLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKSSPSLTTY--PLVIK 199 G G+ ++ + P + A+L V + L KKLN + S + K LT + P ++K Sbjct: 64 GQQGTTMLIYTFPVLFAAVLGCVYLHLGKKLNDNKSISSPK-----EDRLTVWKKPALVK 118
Query: 200 SFMGVLTSADVLFILGILFLVAYTFGRQCHLSFQDLEREYKENPSEFDDSLVIIKFAYAA 379 +G+++ ++LF + + L+ ++F H FQ +E ++ + L + K AA Sbjct: 119 GPLGIVSMTELLFFVMFIALLVWSFWEYLHNGFQGIEA----TAAKKGEKLWVSKLGAAA 174
Query: 380 YYMGRSAMIPFSLLWIPVSRGSPFLRLINMPFEHAVKYHIWLSMLSLFMLTLHGILYIVY 559 +G + I + L+ PV+RGS L L + E ++KYHIWL + L + T HG+ YI+ Sbjct: 175 LRLGLTGNIVLAFLFFPVARGSSILPLFGLTSEGSIKYHIWLGHICLALFTSHGVCYIIR 234
Query: 560 YV 565 ++ Sbjct: 235 WI 236
>tr|A7R0A2|A7R0A2_VITVI Chromosome undetermined scaffold_301, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011355001 PE=4 SV=1 Length = 735
Score = 92.0 bits (227), Expect = 3e-17 Identities = 52/181 (28%), Positives = 102/181 (56%), Gaps = 4/181 (2%) Frame = +2
Query: 26 GYYGSVLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKSSPS--LTTYPLVIK 199 G GS+ + S P +I+A L++V + + + S E ++ + + P L T+P+++ Sbjct: 68 GITGSIFLVFSGPILIIAFLAIVYLVI----SDSGEEELQEKRTSNCPRFRLWTFPVLVD 123
Query: 200 SFMGVLTSADVLFILGILFLVAYTFGRQCHLSFQD--LEREYKENPSEFDDSLVIIKFAY 373 GV+++A+ +GIL + + C + ++ L E+ + PS+ + L++ Sbjct: 124 GPFGVVSAAE---FIGILLFIVFIIWAVCSYTLKNFSLLAEF-QLPSKLECYLML---EL 176
Query: 374 AAYYMGRSAMIPFSLLWIPVSRGSPFLRLINMPFEHAVKYHIWLSMLSLFMLTLHGILYI 553 + G + + L++P++RGS LRL+++PFEHA KYH+WL L++ + TLHG+ Y+ Sbjct: 177 SGLRFGLIGLFCLAFLFLPIARGSVLLRLVDIPFEHATKYHVWLGHLTMLLFTLHGLFYV 236
Query: 554 V 556 + Sbjct: 237 I 237
>tr|Q6T303|Q6T303_MEDTR Ferric reductase OS=Medicago truncatula GN=FRO1 PE=2 SV=1 Length = 703
Score = 91.3 bits (225), Expect = 4e-17 Identities = 46/189 (24%), Positives = 98/189 (51%) Frame = +2
Query: 26 GYYGSVLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKSSPSLTTYPLVIKSF 205 G G ++ + P +++A L V + + KK ++ S+ E G K ++ P+++K Sbjct: 50 GAQGETILMYTFPVLLIATLGCVYLHIAKKSSNESNIEIRNG-KKHGTTIWNRPMLVKGP 108
Query: 206 MGVLTSADVLFILGILFLVAYTFGRQCHLSFQDLEREYKENPSEFDDSLVIIKFAYAAYY 385 +G+++ ++ F+L + L+ ++F H+ F+ + + +E+ +++ K + Sbjct: 109 LGIVSITEIAFLLMFIALLVWSFTTYLHIGFKTVAK----TAAEYGNTVEQEKLYSVGIW 164
Query: 386 MGRSAMIPFSLLWIPVSRGSPFLRLINMPFEHAVKYHIWLSMLSLFMLTLHGILYIVYYV 565 +G I + L+ PV+RGS L + + E +KYHIWL + + + T HGI YI Y+ Sbjct: 165 LGLVGNICLAFLFFPVTRGSSVLPIFGLTSEGCIKYHIWLGHILMAIFTTHGICYITYWA 224
Query: 566 GADEAKAVI 592 ++ ++ Sbjct: 225 STNKMSEML 233
>tr|A9RKK9|A9RKK9_PHYPA Ferric reductase like transmembrane component OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_115851 PE=4 SV=1 Length = 666
Score = 88.6 bits (218), Expect = 3e-16 Identities = 56/171 (32%), Positives = 90/171 (52%) Frame = +2
Query: 41 VLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKSSPSLTTYPLVIKSFMGVLT 220 + + S P I++ +++ + ++++ S + + L T PLV+ F+GVL Sbjct: 1 MFVLYSMPVIVLTIIATAYLAIKQQYPSDLRASWFRRFCRL---LWTRPLVVNEFLGVLN 57
Query: 221 SADVLFILGILFLVAYTFGRQCHLSFQDLEREYKENPSEFDDSLVIIKFAYAAYYMGRSA 400 D+L IL +F+V + + + L NP ++K+ +GR A Sbjct: 58 GFDLLVILSTIFVVLWMVLNELLPQLRSLHG----NPMAG-----LLKWKPIGVVLGRVA 108
Query: 401 MIPFSLLWIPVSRGSPFLRLINMPFEHAVKYHIWLSMLSLFMLTLHGILYI 553 ++P SLL IPVSR SP LR I++PFE AVKYHIWL L++ ML H ++I Sbjct: 109 VLPISLLLIPVSRSSPILRAIDIPFEQAVKYHIWLGHLTMAMLLGHVSIFI 159
>tr|B8A3B5|B8A3B5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 760
Score = 88.2 bits (217), Expect = 4e-16 Identities = 54/179 (30%), Positives = 96/179 (53%), Gaps = 2/179 (1%) Frame = +2
Query: 26 GYYGSVLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKS-SPSLTTYPLVIKS 202 G G + + SAP +I+ALL+ V + S H EK +S S L T+P+++ Sbjct: 84 GIAGGIFLTFSAPILIIALLAYVYISF-----FPSEHVVEKRKLRSLSFRLWTFPVLVDG 138
Query: 203 FMGVLTSADVLFILGILFLVAYTFGRQCHLSFQDLEREYK-ENPSEFDDSLVIIKFAYAA 379 GV+++ + +GI+ + + + + + + K + PS + L++ Sbjct: 139 PFGVVSAVE---FIGIVLFIVFVVYSMTYYAVEAVSLVSKFDIPSMTESELILDVIGLRL 195
Query: 380 YYMGRSAMIPFSLLWIPVSRGSPFLRLINMPFEHAVKYHIWLSMLSLFMLTLHGILYIV 556 +G M+ L++PV+RGS LRLI++PFEHA +YH+WL L++ + TLHG+ Y++ Sbjct: 196 GAVGLFCML---FLFLPVARGSVLLRLIDIPFEHATRYHVWLGHLTMALFTLHGLFYVI 251
>tr|A7PZM1|A7PZM1_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026928001 PE=4 SV=1 Length = 714
Score = 88.2 bits (217), Expect = 4e-16 Identities = 49/183 (26%), Positives = 95/183 (51%) Frame = +2
Query: 26 GYYGSVLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKSSPSLTTYPLVIKSF 205 G G+ ++ + P + A+L + L KKLN++ S K K ++ P+++K Sbjct: 64 GRQGATILIYTFPVLFSAVLGCAYLHLGKKLNNNKS----KSSPKDRLAVLKRPVLVKGP 119
Query: 206 MGVLTSADVLFILGILFLVAYTFGRQCHLSFQDLEREYKENPSEFDDSLVIIKFAYAAYY 385 +G+++ ++LF++ + L+ ++ FQ +E + ++ + L + K AA Sbjct: 120 LGIVSMIEMLFLVMFIALLVWSIYTYLRTGFQGIE----DKAAKKGEKLWVSKLGAAALR 175
Query: 386 MGRSAMIPFSLLWIPVSRGSPFLRLINMPFEHAVKYHIWLSMLSLFMLTLHGILYIVYYV 565 + + I + L+ PV+RGS L LI + E ++KYHIWL L + T HG+ +I+ ++ Sbjct: 176 LALTGNIALAFLFFPVARGSSILPLIGLTSEASIKYHIWLGHTCLTLFTTHGVCFIIRWI 235
Query: 566 GAD 574 D Sbjct: 236 AKD 238
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