DK955625 |
Clone id |
TST39A01NGRL0023_J17 |
Library |
TST39 |
Length |
343 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_J17. 5' end sequence. |
Accession |
DK955625 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL7Contig2 |
Sequence |
GGCAACTTCGGCACAGACAGTTGAATTGAAAGTGGCTATGAGTTGCCAAGGTTGTGTTGG TGCAGTGAAGAGGGTGCTTAGGGAAGATGGAAGGGGTAAATACATATGATATAGACTGGC ATCCGTTTAACGCCACGGACAAAGGTATCGTAAAGCCAGAGGATGTTCTTTCTACTGTTT CCAAAACTGGGAAAGCTACATCGTTTTGGCCAAGTGAAGGAAGTACAGCATCATAGTTTT ATTTGTAAATTGATTTTTGGCTATTGTGACAAGAGCTATGCTCATGAAGTGGCTGATGAT TAAAAAAACTCTTGCATACTAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6BK66 |
Definition |
sp|Q6BK66|CCS1_DEBHA Superoxide dismutase 1 copper chaperone OS=Debaryomyces hansenii |
Align length |
39 |
Score (bit) |
31.6 |
E-value |
1.3 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NJS2 |
Definition |
tr|A9NJS2|A9NJS2_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
51 |
Score (bit) |
62.4 |
E-value |
6.0e-15 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955625|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_J17, 5' (320 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NJS2|A9NJS2_PICSI Putative uncharacterized protein OS=Picea... 62 6e-15 tr|Q5ZF67|Q5ZF67_PLAMJ Copper chaperone OS=Plantago major GN=cch... 59 6e-15 tr|B6SPL7|B6SPL7_MAIZE Copper chaperone OS=Zea mays PE=4 SV=1 60 1e-14 tr|Q94BT9|Q94BT9_ARATH At1g66240/T6J19_6 OS=Arabidopsis thaliana... 62 2e-14 tr|Q9SE04|Q9SE04_ORYSA Copper chaperone homolog CCH OS=Oryza sat... 62 3e-14 tr|Q6H759|Q6H759_ORYSJ Os02g0530100 protein OS=Oryza sativa subs... 62 3e-14 tr|A2X5L0|A2X5L0_ORYSI Putative uncharacterized protein OS=Oryza... 62 3e-14 tr|Q6J338|Q6J338_9ROSI Copper chaperone OS=Populus alba x Populu... 60 5e-14 tr|A9PIL5|A9PIL5_POPJC Putative uncharacterized protein OS=Popul... 60 5e-14 tr|A9PCL8|A9PCL8_POPTR Putative uncharacterized protein OS=Popul... 60 5e-14 tr|O82089|O82089_ARATH Copper homeostasis factor (AT3g56240/F18O... 59 5e-14 tr|B6T1K0|B6T1K0_MAIZE Copper chaperone OS=Zea mays PE=4 SV=1 60 6e-14 tr|Q84KJ2|Q84KJ2_SOLLC Copper chaperone OS=Solanum lycopersicum ... 59 8e-14 tr|B2CM19|B2CM19_SOLCH Copper chaperone OS=Solanum chacoense PE=... 59 8e-14 tr|Q5QL92|Q5QL92_ORYSJ cDNA clone:001-016-H06, full insert seque... 62 1e-13 tr|A7QBE3|A7QBE3_VITVI Chromosome chr13 scaffold_74, whole genom... 61 1e-13 tr|Q70DK1|Q70DK1_HORVD Chopper chaperone OS=Hordeum vulgare var.... 62 1e-13 tr|B6ST82|B6ST82_MAIZE Putative uncharacterized protein OS=Zea m... 61 1e-13 tr|B6SQL3|B6SQL3_MAIZE Putative uncharacterized protein OS=Zea m... 61 1e-13 tr|B6SHX8|B6SHX8_MAIZE Putative uncharacterized protein OS=Zea m... 61 1e-13 tr|A9P875|A9P875_POPTR Putative uncharacterized protein OS=Popul... 60 1e-13 tr|A1ECK4|A1ECK4_9ROSI Putative copper chaperone OS=Citrus hybri... 57 4e-13 tr|A9SR07|A9SR07_PHYPA Predicted protein OS=Physcomitrella paten... 57 7e-13 tr|Q6ZCF3|Q6ZCF3_ORYSJ Os08g0205400 protein OS=Oryza sativa subs... 57 9e-13 tr|A2YSB2|A2YSB2_ORYSI Putative uncharacterized protein OS=Oryza... 57 9e-13 tr|Q9SE03|Q9SE03_SOYBN Copper chaperone homolog CCH OS=Glycine m... 55 3e-12 tr|B7FJ81|B7FJ81_MEDTR Putative uncharacterized protein OS=Medic... 56 1e-11 tr|Q9C7U6|Q9C7U6_ARATH Copper homeostasis factor, putative; 2714... 62 2e-11 tr|B2MUN5|B2MUN5_9CARY Copper chaperone protein OS=Knorringia si... 52 3e-11 tr|B5M1W7|B5M1W7_RHEAU Copper homeostasis factor OS=Rheum austra... 51 6e-11
>tr|A9NJS2|A9NJS2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 75
Score = 62.4 bits (150), Expect(2) = 6e-15 Identities = 31/51 (60%), Positives = 34/51 (66%) Frame = +3
Query: 78 LGKMEGVNTYDIDWHPFNATDKGIVKPEDVLSTVSKTGKATSFWPSEGSTA 230 L KMEGV TYD++ T KG VKP+ VL TVSKTGK TSFWP E A Sbjct: 24 LNKMEGVETYDVNLKEQKVTVKGNVKPDAVLQTVSKTGKETSFWPEEKDIA 74
Score = 42.4 bits (98), Expect(2) = 6e-15 Identities = 19/25 (76%), Positives = 22/25 (88%) Frame = +2
Query: 11 AQTVELKVAMSCQGCVGAVKRVLRE 85 A+TV LKV MSC+GCVGAVKRVL + Sbjct: 2 AETVVLKVGMSCEGCVGAVKRVLNK 26
>tr|Q5ZF67|Q5ZF67_PLAMJ Copper chaperone OS=Plantago major GN=cch1 PE=4 SV=1 Length = 109
Score = 58.9 bits (141), Expect(2) = 6e-15 Identities = 29/49 (59%), Positives = 33/49 (67%) Frame = +3
Query: 78 LGKMEGVNTYDIDWHPFNATDKGIVKPEDVLSTVSKTGKATSFWPSEGS 224 LGKMEGV ++DID T KG V+ E VL TVSKTGK T FWP E + Sbjct: 24 LGKMEGVESFDIDIEKQKVTVKGNVEKEAVLQTVSKTGKKTEFWPEEAA 72
Score = 45.8 bits (107), Expect(2) = 6e-15 Identities = 21/23 (91%), Positives = 22/23 (95%) Frame = +2
Query: 11 AQTVELKVAMSCQGCVGAVKRVL 79 +QTVELKV MSCQGCVGAVKRVL Sbjct: 2 SQTVELKVGMSCQGCVGAVKRVL 24
>tr|B6SPL7|B6SPL7_MAIZE Copper chaperone OS=Zea mays PE=4 SV=1 Length = 84
Score = 60.5 bits (145), Expect(2) = 1e-14 Identities = 30/51 (58%), Positives = 35/51 (68%) Frame = +3
Query: 78 LGKMEGVNTYDIDWHPFNATDKGIVKPEDVLSTVSKTGKATSFWPSEGSTA 230 LGKMEGV +YD+D T KG V P+ VL TVSKTGK TSFW +E T+ Sbjct: 24 LGKMEGVESYDVDIMEQKVTVKGNVTPDAVLQTVSKTGKKTSFWEAEAVTS 74
Score = 43.1 bits (100), Expect(2) = 1e-14 Identities = 20/23 (86%), Positives = 21/23 (91%) Frame = +2
Query: 11 AQTVELKVAMSCQGCVGAVKRVL 79 AQTV LKV MSC+GCVGAVKRVL Sbjct: 2 AQTVVLKVGMSCEGCVGAVKRVL 24
>tr|Q94BT9|Q94BT9_ARATH At1g66240/T6J19_6 OS=Arabidopsis thaliana GN=At1g66240 PE=4 SV=1 Length = 106
Score = 62.0 bits (149), Expect(2) = 2e-14 Identities = 29/51 (56%), Positives = 37/51 (72%) Frame = +3
Query: 78 LGKMEGVNTYDIDWHPFNATDKGIVKPEDVLSTVSKTGKATSFWPSEGSTA 230 LGKMEGV ++D+D T KG V+P+ VL TV+KTGK T+FW +EG TA Sbjct: 54 LGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGKKTAFWEAEGETA 104
Score = 41.2 bits (95), Expect(2) = 2e-14 Identities = 18/23 (78%), Positives = 22/23 (95%) Frame = +2
Query: 11 AQTVELKVAMSCQGCVGAVKRVL 79 +QTV L+VAM+C+GCVGAVKRVL Sbjct: 32 SQTVVLRVAMTCEGCVGAVKRVL 54
>tr|Q9SE04|Q9SE04_ORYSA Copper chaperone homolog CCH OS=Oryza sativa PE=2 SV=1 Length = 132
Score = 61.6 bits (148), Expect(2) = 3e-14 Identities = 31/47 (65%), Positives = 32/47 (68%) Frame = +3
Query: 69 RGCLGKMEGVNTYDIDWHPFNATDKGIVKPEDVLSTVSKTGKATSFW 209 R L KMEGV T+DID T KG VKPEDV TVSKTGK TSFW Sbjct: 22 RRVLTKMEGVETFDIDMEQQKVTVKGNVKPEDVFQTVSKTGKKTSFW 68
Score = 40.8 bits (94), Expect(2) = 3e-14 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = +2
Query: 8 SAQTVELKVAMSCQGCVGAVKRVL 79 +A+TV LKV MSCQGC GAV+RVL Sbjct: 2 AAETVVLKVGMSCQGCAGAVRRVL 25
>tr|Q6H759|Q6H759_ORYSJ Os02g0530100 protein OS=Oryza sativa subsp. japonica GN=P0476H10.30-1 PE=4 SV=1 Length = 132
Score = 61.6 bits (148), Expect(2) = 3e-14 Identities = 31/47 (65%), Positives = 32/47 (68%) Frame = +3
Query: 69 RGCLGKMEGVNTYDIDWHPFNATDKGIVKPEDVLSTVSKTGKATSFW 209 R L KMEGV T+DID T KG VKPEDV TVSKTGK TSFW Sbjct: 22 RRVLTKMEGVETFDIDMEQQKVTVKGNVKPEDVFQTVSKTGKKTSFW 68
Score = 40.8 bits (94), Expect(2) = 3e-14 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = +2
Query: 8 SAQTVELKVAMSCQGCVGAVKRVL 79 +A+TV LKV MSCQGC GAV+RVL Sbjct: 2 AAETVVLKVGMSCQGCAGAVRRVL 25
>tr|A2X5L0|A2X5L0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07492 PE=4 SV=1 Length = 132
Score = 61.6 bits (148), Expect(2) = 3e-14 Identities = 31/47 (65%), Positives = 32/47 (68%) Frame = +3
Query: 69 RGCLGKMEGVNTYDIDWHPFNATDKGIVKPEDVLSTVSKTGKATSFW 209 R L KMEGV T+DID T KG VKPEDV TVSKTGK TSFW Sbjct: 22 RRVLTKMEGVETFDIDMEQQKVTVKGNVKPEDVFQTVSKTGKKTSFW 68
Score = 40.8 bits (94), Expect(2) = 3e-14 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = +2
Query: 8 SAQTVELKVAMSCQGCVGAVKRVL 79 +A+TV LKV MSCQGC GAV+RVL Sbjct: 2 AAETVVLKVGMSCQGCAGAVRRVL 25
>tr|Q6J338|Q6J338_9ROSI Copper chaperone OS=Populus alba x Populus tremula var. glandulosa GN=CCH PE=4 SV=1 Length = 85
Score = 59.7 bits (143), Expect(2) = 5e-14 Identities = 29/47 (61%), Positives = 34/47 (72%) Frame = +3
Query: 78 LGKMEGVNTYDIDWHPFNATDKGIVKPEDVLSTVSKTGKATSFWPSE 218 LGKMEGV +YDID T KG V+P+ VL TVSKTGK T+FW +E Sbjct: 24 LGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAFWEAE 70
Score = 42.0 bits (97), Expect(2) = 5e-14 Identities = 19/23 (82%), Positives = 21/23 (91%) Frame = +2
Query: 11 AQTVELKVAMSCQGCVGAVKRVL 79 +QTV LKV MSC+GCVGAVKRVL Sbjct: 2 SQTVVLKVGMSCEGCVGAVKRVL 24
>tr|A9PIL5|A9PIL5_POPJC Putative uncharacterized protein OS=Populus jackii PE=4 SV=1 Length = 85
Score = 59.7 bits (143), Expect(2) = 5e-14 Identities = 29/47 (61%), Positives = 34/47 (72%) Frame = +3
Query: 78 LGKMEGVNTYDIDWHPFNATDKGIVKPEDVLSTVSKTGKATSFWPSE 218 LGKMEGV +YDID T KG V+P+ VL TVSKTGK T+FW +E Sbjct: 24 LGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAFWEAE 70
Score = 42.0 bits (97), Expect(2) = 5e-14 Identities = 19/23 (82%), Positives = 21/23 (91%) Frame = +2
Query: 11 AQTVELKVAMSCQGCVGAVKRVL 79 +QTV LKV MSC+GCVGAVKRVL Sbjct: 2 SQTVVLKVGMSCEGCVGAVKRVL 24
>tr|A9PCL8|A9PCL8_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 85
Score = 59.7 bits (143), Expect(2) = 5e-14 Identities = 29/47 (61%), Positives = 34/47 (72%) Frame = +3
Query: 78 LGKMEGVNTYDIDWHPFNATDKGIVKPEDVLSTVSKTGKATSFWPSE 218 LGKMEGV +YDID T KG V+P+ VL TVSKTGK T+FW +E Sbjct: 24 LGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKTGKKTAFWEAE 70
Score = 42.0 bits (97), Expect(2) = 5e-14 Identities = 19/23 (82%), Positives = 21/23 (91%) Frame = +2
Query: 11 AQTVELKVAMSCQGCVGAVKRVL 79 +QTV LKV MSC+GCVGAVKRVL Sbjct: 2 SQTVVLKVGMSCEGCVGAVKRVL 24
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