DK955630
Clone id TST39A01NGRL0023_J22
Library
Length 592
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_J22. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GGCCTTTGCGTACAGATTCCACCTTGGCTTCCTCATGTCGAGAGCTCCTCGCCATTTCTG
TATTTGCCCCAATTCTACACTCGCAGCTCCATAGCCGGCCTTCAATTCCTGCTCGACACT
CTCTTTTTCTGTGGGGAAGTCAGCCTCGATCTTCCCCTTCTCCATGGCTACTCCCCCCCA
TGCGATCCTCCATCGATCCTCCATCCTTCCATCAGGCCTTCCTCCTGCCGCTGATGAGCT
TCTACAGCGGATGCTCCTCATGGCAACCGATTTTGTCGGCTCCCCTGCAGGTCTGCATTA
TCAACATCGCGAGAGACATACAGGTAAAACCCTCAGAACCCCCAAGTTGTCGGTACTAGG
GTTTGCATCCCTGCTTTTAGGCATCTCCTCCACCTTGATGCTGTTTGGTTCCTTTGCTTT
CTTGTTGGGCTTCATGCTCATGCCCCTCATTTTACCTACCAGCATCGTTGTATGCGTAAC
TGCACAGTTTCCAGCTTTCAAGGAAGGTCGCTCCCTTTGCTCGGTATCATCCATGTCAAT
GTGGGGCAGTAAGATTTTGCAGCAAGAAGCAAGGTGTTAGCTATGGATTGAG
■■Homology search results ■■ -
sp_hit_id Q05755
Definition sp|Q05755|GLTB_AZOBR Glutamate synthase [NADPH] large chain OS=Azospirillum brasilense
Align length 83
Score (bit) 32.0
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955630|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_J22, 5'
(592 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q05755|GLTB_AZOBR Glutamate synthase [NADPH] large chain OS=A... 32 2.4
sp|Q5XID0|YIPF5_RAT Protein YIPF5 OS=Rattus norvegicus GN=Yipf5 ... 32 3.1
sp|Q5R6W5|YIPF5_PONAB Protein YIPF5 OS=Pongo abelii GN=YIPF5 PE=... 32 3.1
sp|Q9EQQ2|YIPF5_MOUSE Protein YIPF5 OS=Mus musculus GN=Yipf5 PE=... 32 3.1
sp|Q4R5M4|YIPF5_MACFA Protein YIPF5 OS=Macaca fascicularis GN=YI... 32 3.1
sp|Q969M3|YIPF5_HUMAN Protein YIPF5 OS=Homo sapiens GN=YIPF5 PE=... 32 3.1
sp|Q5E9E8|YIPF5_BOVIN Protein YIPF5 OS=Bos taurus GN=YIPF5 PE=2 ... 32 3.1
sp|Q0U324|KATG_PHANO Catalase-peroxidase OS=Phaeosphaeria nodoru... 32 3.1
sp|Q3ATP4|RPOC_CHLCH DNA-directed RNA polymerase subunit beta' O... 31 4.1
sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabi... 31 4.1
sp|P20488|SYPH_BOVIN Synaptophysin OS=Bos taurus GN=SYP PE=2 SV=3 31 5.3
sp|A6LLL0|EFG_THEM4 Elongation factor G OS=Thermosipho melanesie... 31 5.3
sp|Q13061|TRDN_HUMAN Triadin OS=Homo sapiens GN=TRDN PE=1 SV=3 30 7.0
sp|A5D7K7|YIPF7_BOVIN Protein YIPF7 OS=Bos taurus GN=YIPF7 PE=2 ... 30 9.1
sp|Q4FM39|PYRG_PELUB CTP synthase OS=Pelagibacter ubique GN=pyrG... 30 9.1
sp|Q9QXD8|LIMD1_MOUSE LIM domain-containing protein 1 OS=Mus mus... 30 9.1
sp|Q8R4E0|IRF2_SIGHI Interferon regulatory factor 2 OS=Sigmodon ... 30 9.1
sp|P23906|IRF2_MOUSE Interferon regulatory factor 2 OS=Mus muscu... 30 9.1
sp|Q9VR07|INE_DROME Sodium- and chloride-dependent GABA transpor... 30 9.1
sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5 OS=Arabi... 30 9.1

>sp|Q05755|GLTB_AZOBR Glutamate synthase [NADPH] large chain
OS=Azospirillum brasilense GN=gltB PE=1 SV=1
Length = 1515

Score = 32.0 bits (71), Expect = 2.4
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Frame = -2

Query: 291 PAGEPTKSVAMRSIRCRSSSAAGG------RPDGRMEDRWRIAWGGVAMEKGKIEADFPT 130
P T +VAM I +S S GG RPD + D W A VA + + A++
Sbjct: 901 PEAHGTLNVAMNRIGAKSDSGEGGEDPARFRPD-KNGDNWNSAIKQVASGRFGVTAEYLN 959

Query: 129 EKESVEQELKAGYGAASVELGQI 61
+ E E+K GA E GQ+
Sbjct: 960 QCR--ELEIKVAQGAKPGEGGQL 980


>sp|Q5XID0|YIPF5_RAT Protein YIPF5 OS=Rattus norvegicus GN=Yipf5
PE=2 SV=1
Length = 257

Score = 31.6 bits (70), Expect = 3.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2

Query: 347 LSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTAQ 487
+ LG LL +S T + FG A +LG+ L+P+IL +S V + Q
Sbjct: 158 IGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSSFAVVFSLQ 204


>sp|Q5R6W5|YIPF5_PONAB Protein YIPF5 OS=Pongo abelii GN=YIPF5 PE=2
SV=1
Length = 257

Score = 31.6 bits (70), Expect = 3.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2

Query: 347 LSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTAQ 487
+ LG LL +S T + FG A +LG+ L+P+IL +S V + Q
Sbjct: 158 IGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSSFAVIFSLQ 204


>sp|Q9EQQ2|YIPF5_MOUSE Protein YIPF5 OS=Mus musculus GN=Yipf5 PE=2
SV=1
Length = 257

Score = 31.6 bits (70), Expect = 3.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2

Query: 347 LSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTAQ 487
+ LG LL +S T + FG A +LG+ L+P+IL +S V + Q
Sbjct: 158 IGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSSFAVVFSLQ 204


>sp|Q4R5M4|YIPF5_MACFA Protein YIPF5 OS=Macaca fascicularis GN=YIPF5
PE=2 SV=1
Length = 257

Score = 31.6 bits (70), Expect = 3.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2

Query: 347 LSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTAQ 487
+ LG LL +S T + FG A +LG+ L+P+IL +S V + Q
Sbjct: 158 IGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSSFAVIFSLQ 204


>sp|Q969M3|YIPF5_HUMAN Protein YIPF5 OS=Homo sapiens GN=YIPF5 PE=1
SV=1
Length = 257

Score = 31.6 bits (70), Expect = 3.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2

Query: 347 LSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTAQ 487
+ LG LL +S T + FG A +LG+ L+P+IL +S V + Q
Sbjct: 158 IGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSSFAVIFSLQ 204


>sp|Q5E9E8|YIPF5_BOVIN Protein YIPF5 OS=Bos taurus GN=YIPF5 PE=2
SV=1
Length = 257

Score = 31.6 bits (70), Expect = 3.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2

Query: 347 LSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTAQ 487
+ LG LL +S T + FG A +LG+ L+P+IL +S V + Q
Sbjct: 158 IGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSSFAVIFSLQ 204


>sp|Q0U324|KATG_PHANO Catalase-peroxidase OS=Phaeosphaeria nodorum
GN=katG PE=3 SV=1
Length = 751

Score = 31.6 bits (70), Expect = 3.1
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2

Query: 276 TKSVAMRSIRCRSSSAAGGRPDGRMEDRWRIAWGG 172
T +VA+ S+ C + AGGRPD D I WGG
Sbjct: 153 TGNVALESMGCETFGFAGGRPDTFQSDE-SIYWGG 186


>sp|Q3ATP4|RPOC_CHLCH DNA-directed RNA polymerase subunit beta'
OS=Chlorobium chlorochromatii (strain CaD3) GN=rpoC PE=3
SV=1
Length = 1502

Score = 31.2 bits (69), Expect = 4.1
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -2

Query: 555 ILLPHIDMDDTEQRERPSLKAGNCAVTHTTML----VGKMRGMSMKPNKKA-KEPNSIKV 391
+LL +ID+D+T R L+ N T L V + S +P+KK+ K+PN++
Sbjct: 198 MLLKNIDLDETAVHLRTVLRESNSEQKRTDALKRLKVVESFRKSYEPHKKSRKKPNALFA 257

Query: 390 E-EMPKSRDANPSTDNLGVLRVLPV 319
E +MP+ + V+ V+PV
Sbjct: 258 EDDMPEPYVYEGNKPEYMVMEVIPV 282


>sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2
OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2
Length = 441

Score = 31.2 bits (69), Expect = 4.1
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +2

Query: 251 MLLMATDFVGSPAGLHYQHRERHTGKTLRTPKLSVLGFASLLLGISSTLMLF 406
+LLMA + PA LHY H E H G + +L++ F+S ++ I+ LF
Sbjct: 204 LLLMAVMGILFPAVLHYTHSEVHAGSS----ELALSRFSSCIMLIAYAAYLF 251


tr_hit_id B5TV75
Definition tr|B5TV75|B5TV75_CAMSI Putative uncharacterized protein OS=Camellia sinensis
Align length 74
Score (bit) 55.5
E-value 2.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955630|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_J22, 5'
(592 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B5TV75|B5TV75_CAMSI Putative uncharacterized protein OS=Camel... 55 2e-06
tr|A7QP35|A7QP35_VITVI Chromosome chr1 scaffold_136, whole genom... 54 9e-06
tr|A9PJ93|A9PJ93_POPJC Putative uncharacterized protein OS=Popul... 53 1e-05
tr|A9PFD3|A9PFD3_POPTR Putative uncharacterized protein OS=Popul... 53 1e-05
tr|A9NMY2|A9NMY2_PICSI Putative uncharacterized protein OS=Picea... 52 3e-05
tr|Q9FZK6|Q9FZK6_ARATH F17L21.8 OS=Arabidopsis thaliana PE=4 SV=1 49 2e-04
tr|Q94F23|Q94F23_ARATH Putative uncharacterized protein F17L21.8... 49 2e-04
tr|A9NXB6|A9NXB6_PICSI Putative uncharacterized protein OS=Picea... 44 0.005
tr|Q0J0I6|Q0J0I6_ORYSJ Os09g0507400 protein OS=Oryza sativa subs... 42 0.034
tr|B8BDB8|B8BDB8_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.034
tr|Q8RYH1|Q8RYH1_ORYSJ cDNA clone:J023064M05, full insert sequen... 41 0.045
tr|A3A119|A3A119_ORYSJ Putative uncharacterized protein OS=Oryza... 41 0.045
tr|B6TAH5|B6TAH5_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.077
tr|B6TAE9|B6TAE9_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.077
tr|B6SQ42|B6SQ42_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.077
tr|A2WYI0|A2WYI0_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.077
tr|B0D1X1|B0D1X1_LACBS Predicted protein OS=Laccaria bicolor (st... 39 0.29
tr|A3C0G7|A3C0G7_ORYSJ Putative uncharacterized protein OS=Oryza... 38 0.38
tr|A8ICH4|A8ICH4_CHLRE Predicted protein OS=Chlamydomonas reinha... 37 0.65
tr|A8H2G4|A8H2G4_SHEPA Polysaccharide biosynthesis protein OS=Sh... 37 0.85
tr|B3MXQ9|B3MXQ9_DROAN GF19392 OS=Drosophila ananassae GN=GF1939... 37 1.1
tr|B6TN46|B6TN46_MAIZE Putative uncharacterized protein OS=Zea m... 36 1.4
tr|B0DH81|B0DH81_LACBS Predicted protein OS=Laccaria bicolor (st... 35 4.2
tr|A8WVN6|A8WVN6_CAEBR Putative uncharacterized protein (Fragmen... 34 5.5
tr|A2SPE5|A2SPE5_METLZ Putative uncharacterized protein OS=Metha... 34 5.5
tr|A2VV23|A2VV23_9BURK Metallophosphoesterase OS=Burkholderia ce... 34 7.1
tr|A3URT6|A3URT6_VIBSP RfbJ protein OS=Vibrio splendidus 12B01 G... 34 7.2
tr|Q667M9|Q667M9_YERPS Putative Nucleobase:Cation symporter, NCS... 33 9.2
tr|Q1CFI8|Q1CFI8_YERPN Permease OS=Yersinia pestis bv. Antiqua (... 33 9.2
tr|Q1CAJ3|Q1CAJ3_YERPA Putative permease OS=Yersinia pestis bv. ... 33 9.2

>tr|B5TV75|B5TV75_CAMSI Putative uncharacterized protein OS=Camellia
sinensis PE=2 SV=1
Length = 129

Score = 55.5 bits (132), Expect = 2e-06
Identities = 36/74 (48%), Positives = 41/74 (55%)
Frame = +2

Query: 338 TPKLSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTAQFPAFKEGRSL 517
TP +S GFASLLLGIS LML GS F +GFMLMP +L +V V
Sbjct: 49 TPPISPAGFASLLLGISLALMLCGSVTFFIGFMLMPWVLGLVMVFYVVG----------- 97

Query: 518 CSVSSMSMWGSKIL 559
VSS+SM G IL
Sbjct: 98 -IVSSLSMIGRAIL 110


>tr|A7QP35|A7QP35_VITVI Chromosome chr1 scaffold_136, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00002783001
PE=4 SV=1
Length = 127

Score = 53.5 bits (127), Expect = 9e-06
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +2

Query: 281 SPAGLHYQHRERHTGKTLRTPKLSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLIL 454
SPA E +T + T ++S GFASLLLGIS LML GS F +GF+LMP +L
Sbjct: 28 SPAPFSEHSPEVYTSRRPTTTQISPAGFASLLLGISLALMLCGSVTFFIGFILMPWVL 85


>tr|A9PJ93|A9PJ93_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 129

Score = 52.8 bits (125), Expect = 1e-05
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +2

Query: 335 RTPKLSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTAQFPAFKEGRS 514
R P+++ GFASLLLG+S TLML GS F +GF+LMP +L +V V
Sbjct: 47 RLPEITPAGFASLLLGMSLTLMLCGSVTFFIGFLLMPWVLGLVMVFYVAG---------- 96

Query: 515 LCSVSSMSMWGSKIL 559
VS++SM G +L
Sbjct: 97 --IVSTISMLGRSLL 109


>tr|A9PFD3|A9PFD3_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 129

Score = 52.8 bits (125), Expect = 1e-05
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +2

Query: 335 RTPKLSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTAQFPAFKEGRS 514
R P+++ GFASLLLG+S TLML GS F +GF+LMP +L +V V
Sbjct: 47 RLPEITPAGFASLLLGMSLTLMLCGSVTFFIGFLLMPWVLGLVMVFYVAG---------- 96

Query: 515 LCSVSSMSMWGSKIL 559
VS++SM G +L
Sbjct: 97 --IVSTISMLGRSLL 109


>tr|A9NMY2|A9NMY2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 133

Score = 52.0 bits (123), Expect = 3e-05
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +2

Query: 332 LRTPKLSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTA 484
+R ++ +GFASLL GI+STLM GS AF++G M+MPL+ ++V V A
Sbjct: 49 VRKSHMTPVGFASLLFGIASTLMFIGSTAFMIGVMMMPLVAMVAMVFSVIA 99


>tr|Q9FZK6|Q9FZK6_ARATH F17L21.8 OS=Arabidopsis thaliana PE=4 SV=1
Length = 142

Score = 49.3 bits (116), Expect = 2e-04
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = +2

Query: 347 LSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTAQFPAFKEGRSLCSV 526
+S GFASLLLGIS LML GS F +GF+LMP +L +V V V
Sbjct: 63 ISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAG------------IV 110

Query: 527 SSMSMWGSKIL 559
S++SM G IL
Sbjct: 111 SAISMVGRSIL 121


>tr|Q94F23|Q94F23_ARATH Putative uncharacterized protein F17L21.8
(Putative uncharacterized protein At1g27290; F17L21.8)
OS=Arabidopsis thaliana GN=At1g27290/F17L21.8 PE=2 SV=1
Length = 142

Score = 49.3 bits (116), Expect = 2e-04
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = +2

Query: 347 LSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTAQFPAFKEGRSLCSV 526
+S GFASLLLGIS LML GS F +GF+LMP +L +V V V
Sbjct: 64 ISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAG------------IV 111

Query: 527 SSMSMWGSKIL 559
S++SM G IL
Sbjct: 112 SAISMVGRSIL 122


>tr|A9NXB6|A9NXB6_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 128

Score = 44.3 bits (103), Expect = 0.005
Identities = 26/83 (31%), Positives = 42/83 (50%)
Frame = +2

Query: 221 PPAADELLQRMLLMATDFVGSPAGLHYQHRERHTGKTLRTPKLSVLGFASLLLGISSTLM 400
P AD+L + + L+ + P + H L+ +G LL GI+S LM
Sbjct: 18 PHQADDLFRDLGLLLFSILDCPISTNLSFVRTH---------LTPVGLTWLLFGIASALM 68

Query: 401 LFGSFAFLLGFMLMPLILPTSIV 469
L GS AF++G M+MP++ ++V
Sbjct: 69 LVGSVAFMIGIMMMPVVAIVAMV 91


>tr|Q0J0I6|Q0J0I6_ORYSJ Os09g0507400 protein OS=Oryza sativa subsp.
japonica GN=Os09g0507400 PE=2 SV=1
Length = 124

Score = 41.6 bits (96), Expect = 0.034
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +2

Query: 344 KLSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIV 469
+++ G AS+LLG S LML GS F+LGF LMP ++ + V
Sbjct: 49 QVTAAGVASMLLGASVALMLCGSVTFMLGFFLMPWVIGLACV 90


>tr|B8BDB8|B8BDB8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_31968 PE=4 SV=1
Length = 139

Score = 41.6 bits (96), Expect = 0.034
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +2

Query: 344 KLSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIV 469
+++ G AS+LLG S LML GS F+LGF LMP ++ + V
Sbjct: 49 QVTAAGVASMLLGASVALMLCGSVTFMLGFFLMPWVIGLACV 90