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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955633
Clone id TST39A01NGRL0023_K01
Library
Length 772
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_K01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTAAACATGGGTACCCTTCCCCTTCTCTCCTGCTTGTTAGTGTCTACCTTGTTTGTCTGT
GTTTGCCGTAGCTCAGCTGCAGCTTTCGATGCTTCCACAGTGAAGACCTCTCACTCCTTC
GACTCCTACGACTTGTTCATGGAGCTTTCGCCCGTTGCCGAGCAGAAAACTGTGAGCACC
CGCAAGCAAGCTGCCGGATCCTCCTCCAAGGACAGCACCCCCCACATGAAGGTCGGCAAG
GAATATGCCTTGTGCAAGGCCACCTCATCCTCCTGCCTCGGGAATCAACTCTCTTGCTCC
ACCTCTTGCTTGGACGGTTTCTATGGTGGAGGCTATGGACCCGGATATGGCTATGGAGGT
GGCTATGGGCGGGGCTACGGAGGCGGTTATGGACGTGGTTATGGCTATGGTCCTGGCTAT
GGCTATGGTCGTGGTGGTGGAGGTGGCGGCGGTGGAGGTGGTAGTTTTGGGGGTGGAGGT
GGTGGCGGTGGCGGTGGTGGTGGTGGGCGGGTGGTGGTGGTGGAAGTGGTTGGCGTAGTG
CATGCCAATATTGATTGCTTCTCCTCATGCAAGGGCCACTTGCAACAACCAGGAGGGAGG
GCAATTTGGGTCTTCAAGTATATGTGGTGCCCGTTACACTTTTTTCACCGGGTTTCAACC
CCTTGAGGCAAAAAAAAAATTAATGTTTTTCTGAGAAAAAGTTCCCCACAAAAAAAAAAT
TTTAATTAAACAAATTTAAACGGTGTTTTTAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q8TB68
Definition sp|Q8TB68|PRR7_HUMAN Proline-rich protein 7 OS=Homo sapiens
Align length 65
Score (bit) 33.9
E-value 0.97
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955633|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_K01, 5'
         (750 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8TB68|PRR7_HUMAN Proline-rich protein 7 OS=Homo sapiens GN=P...    34   0.97 

>sp|Q8TB68|PRR7_HUMAN Proline-rich protein 7 OS=Homo sapiens GN=PRR7
           PE=2 SV=1
          Length = 274

 Score = 33.9 bits (76), Expect = 0.97
 Identities = 19/65 (29%), Positives = 24/65 (36%)
 Frame = -3

Query: 385 RLRSPAHSHLHSHIRVHSLHHRNRPSKRWSKRVDSRGRRMRWPCTRHIPCRPSCGGCCPW 206
           RL +PAH+H H H+ VH L H                  +  P   H+   P      PW
Sbjct: 83  RLEAPAHAHSHPHVHVHPLLHHGPAQPHAHAHPHPHHHALPHPPPTHLSVPPR-----PW 137

Query: 205 RRIRQ 191
              RQ
Sbjct: 138 SYPRQ 142
tr_hit_id Q3U9R3
Definition tr|Q3U9R3|Q3U9R3_MOUSE Putative uncharacterized protein OS=Mus musculus
Align length 58
Score (bit) 38.1
E-value 0.63
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955633|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_K01, 5'
         (750 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q3U9R3|Q3U9R3_MOUSE Putative uncharacterized protein OS=Mus m...    38   0.63 
tr|Q3U5K6|Q3U5K6_MOUSE Putative uncharacterized protein OS=Mus m...    38   0.63 
tr|Q2KFP6|Q2KFP6_MAGGR Putative uncharacterized protein OS=Magna...    38   0.63 
tr|Q8VYQ3|Q8VYQ3_ARATH AT3g04930/T9J14_12 OS=Arabidopsis thalian...    28   1.2  
tr|A6BL21|A6BL21_9CYAN Putative uncharacterized protein OS=Lepto...    35   4.1  
tr|Q6ESE4|Q6ESE4_ORYSJ Putative uncharacterized protein P0605D08...    35   4.1  
tr|Q0E0P6|Q0E0P6_ORYSJ Os02g0533000 protein OS=Oryza sativa subs...    35   4.1  
tr|A8PFC4|A8PFC4_BRUMA 3'5'-cyclic nucleotide phosphodiesterase ...    35   6.9  

>tr|Q3U9R3|Q3U9R3_MOUSE Putative uncharacterized protein OS=Mus
           musculus GN=I830134H01Rik PE=2 SV=1
          Length = 150

 Score = 38.1 bits (87), Expect = 0.63
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = -3

Query: 379 RSPAHSHLHSHIRVHSLHHRNRPSK---RWSKRVDSRGRRMRWPCTRHIPCRPSCGGC 215
           RSP H+H H+H   H+  H + P       + R   +GR +    T  +    SCG C
Sbjct: 91  RSPTHTHTHTHTHTHTHTHTHTPGAGEGSLNSRAQRKGREVHCSSTSALQNLGSCGSC 148


>tr|Q3U5K6|Q3U5K6_MOUSE Putative uncharacterized protein OS=Mus
           musculus GN=I830134H01Rik PE=2 SV=1
          Length = 150

 Score = 38.1 bits (87), Expect = 0.63
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = -3

Query: 379 RSPAHSHLHSHIRVHSLHHRNRPSK---RWSKRVDSRGRRMRWPCTRHIPCRPSCGGC 215
           RSP H+H H+H   H+  H + P       + R   +GR +    T  +    SCG C
Sbjct: 91  RSPTHTHTHTHTHTHTHTHTHTPGAGEGSLNSRAQRKGREVHCSSTSALQNLGSCGSC 148


>tr|Q2KFP6|Q2KFP6_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea 70-15 GN=MGCH7_ch7g639 PE=4 SV=1
          Length = 1139

 Score = 38.1 bits (87), Expect = 0.63
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = -3

Query: 367 HSHLHSHIRVHSLHHRNRPSKRWSKRVDSRGRRMRWPCTRHIPCRPSCGGCCPWRRIRQL 188
           HSH+H+H+ V S    + P +  S+    R +R R  C +    R  C G CP RR    
Sbjct: 15  HSHVHTHMAVDSPQPDDVPDEDLSEHARPR-KRTRRACDKCSNSRTRCNGECPCRRCVDY 73

Query: 187 ACGCS-QFSARQRAKAP 140
              C      ++R +AP
Sbjct: 74  GYTCRYNREVKKRGRAP 90


>tr|Q8VYQ3|Q8VYQ3_ARATH AT3g04930/T9J14_12 OS=Arabidopsis thaliana
           PE=2 SV=1
          Length = 416

 Score = 27.7 bits (60), Expect(2) = 1.2
 Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
 Frame = +2

Query: 512 WWWWKWLA*CMPILIASPHARATC--NNQEGG 601
           WWWW W     P +  +   R  C    ++GG
Sbjct: 383 WWWWSWFWLAKPHVYTAVQFRFWCRGRRKQGG 414



 Score = 26.9 bits (58), Expect(2) = 1.2
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 509 GWWWWKW 529
           GWWWW W
Sbjct: 379 GWWWWWW 385


>tr|A6BL21|A6BL21_9CYAN Putative uncharacterized protein
           OS=Leptolyngbya valderiana BDU 20041 GN=LVAL_00016 PE=4
           SV=1
          Length = 111

 Score = 35.4 bits (80), Expect = 4.1
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
 Frame = -3

Query: 382 LRSPAHSHLHSHIRVHSLHHRN-----RPSKRWSKRVDSRGRRMRWPCTRHIPCRPSCGG 218
           L  PAH+H H H    S   +      RP +RW  R++   R       R IPC      
Sbjct: 4   LTHPAHTHPHPHPVAVSPRRQTGFDIFRPLRRWIDRIEVTHRLFAHLVCRVIPC------ 57

Query: 217 CCPWRR 200
           CCP+ R
Sbjct: 58  CCPFER 63


>tr|Q6ESE4|Q6ESE4_ORYSJ Putative uncharacterized protein P0605D08.33
           OS=Oryza sativa subsp. japonica GN=P0605D08.33 PE=4 SV=1
          Length = 528

 Score = 35.4 bits (80), Expect = 4.1
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -3

Query: 376 SPAHSHLHSHIRV---HSLHHRNRPSKRWSKRVDSRGRRMRWP 257
           SP H HLH H+RV   H   H + PS RW   V +R   ++ P
Sbjct: 35  SPYHHHLHLHLRVAHHHHGRHPHPPSPRWRHDVRARAGTIQAP 77


>tr|Q0E0P6|Q0E0P6_ORYSJ Os02g0533000 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0533000 PE=4 SV=1
          Length = 527

 Score = 35.4 bits (80), Expect = 4.1
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -3

Query: 376 SPAHSHLHSHIRV---HSLHHRNRPSKRWSKRVDSRGRRMRWP 257
           SP H HLH H+RV   H   H + PS RW   V +R   ++ P
Sbjct: 35  SPYHHHLHLHLRVAHHHHGRHPHPPSPRWRHDVRARAGTIQAP 77


>tr|A8PFC4|A8PFC4_BRUMA 3'5'-cyclic nucleotide phosphodiesterase
           family protein OS=Brugia malayi GN=Bm1_24025 PE=4 SV=1
          Length = 663

 Score = 34.7 bits (78), Expect = 6.9
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = -3

Query: 679 FFFCLKGLKPGEKSVTGTTYT*RPKLPSLLVVASGPCMRRSNQYW 545
           FFFC    KP   S+T +T T    LP+   +A+ P   RS+ YW
Sbjct: 117 FFFCFSSSKPRLSSITFSTVTSATGLPT---IAAEPSRPRSSSYW 158