DK955634
Clone id TST39A01NGRL0023_K02
Library
Length 633
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_K02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
TGAAAACTCTTTATACGTCTGCACTTCAAAGTTTAAAATCGCAGTGAATGATGCAAAGCA
AGAAACCAGCGTAGGCTGGTTATATGGGCAACCTCAGGGGAGGGCAACTGCTGCAAGATT
GGCTGCCAGTACACATCATCGATAGATATATGCTCCTTCTCACCGTCTGCTTCTTCCATG
GGCCTTCGGGTGCCCTTCCCTTCTAGCACCACAGAGAGACGATGGCGCTCTTCCATAATC
AGTTTGTGTGCGTGCACGCACACACGTTCACGCAGAAACTCACCTTCAATTGAGGGCTCT
CTTGCCCTTCTGTGTTTCTCTATGGGCTCTCCTTCTTGAGCTCATTCAACAAGCTCCAGC
AGCTCTTCATCTCTTCGTAGTCCTGGAAATATGGGGTGGATAGCAAGGTGCCATGCAGGG
AGCTCATCATCTCGTGCTTTTGCAAATGCTGAAGAGGCTGACATAGGAAGCTCAAGCCAG
CTTGAGATAAACATAATTTCAGCACAGGATTTGAAGAGGGAAAAGTTTGTGGCACAAATG
CATGTTTATGCTGTGGCATGGATCAGGGGAAGACTACAAGCTAAGGACCCATGTCGTGAA
CTGTGATGATCTTCACCCCTCTTGGAATGCGCA
■■Homology search results ■■ -
sp_hit_id Q59E36
Definition sp|Q59E36|RCOR_DROME REST corepressor OS=Drosophila melanogaster
Align length 59
Score (bit) 31.6
E-value 3.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955634|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_K02, 5'
(633 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q59E36|RCOR_DROME REST corepressor OS=Drosophila melanogaster... 32 3.5
sp|Q96JP5|ZFP91_HUMAN Zinc finger protein 91 homolog OS=Homo sap... 32 3.6
sp|A5EEC1|RNH2_BRASB Ribonuclease HII OS=Bradyrhizobium sp. (str... 31 4.6
sp|Q6P1G0|HEAT6_MOUSE HEAT repeat-containing protein 6 OS=Mus mu... 31 4.6
sp|Q8R4S4|AHR_MUSSI Aryl hydrocarbon receptor OS=Mus spicilegus ... 31 4.6
sp|Q8R4S5|AHR_MUSMM Aryl hydrocarbon receptor OS=Mus musculus mo... 31 4.6
sp|Q8R4S6|AHR_MUSMC Aryl hydrocarbon receptor OS=Mus musculus ca... 31 4.6
sp|P30561|AHR_MOUSE Aryl hydrocarbon receptor OS=Mus musculus GN... 31 4.6
sp|P01261|CALC_SHEEP Calcitonin OS=Ovis aries GN=CALCA PE=1 SV=2 31 6.1
sp|Q8R4S2|AHR_MUSSP Aryl hydrocarbon receptor OS=Mus spretus GN=... 31 6.1

>sp|Q59E36|RCOR_DROME REST corepressor OS=Drosophila melanogaster
GN=CoRest PE=1 SV=1
Length = 657

Score = 31.6 bits (70), Expect = 3.5
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = -2

Query: 242 LIMEERHRLSVVLEGKGTRRPMEEADGEKEHISIDDVYWQPILQQLPSPEVAHITSLRW 66
L + ER R L + R+ ME+ D E E I++DDV +P S + S RW
Sbjct: 318 LYLAERERKLTALMAEKNRQVMEQLDKECETINVDDVLSKPAAANTESAQPR--ISARW 374


>sp|Q96JP5|ZFP91_HUMAN Zinc finger protein 91 homolog OS=Homo
sapiens GN=ZFP91 PE=1 SV=1
Length = 570

Score = 31.6 bits (70), Expect = 3.6
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1

Query: 172 SSMGLRVPFPSSTTERRWRSSIISLCACTHTRSRRNSPSIEGSLALLC 315
S++ V +S R WRSS S+ T + R+S S GSL L+C
Sbjct: 135 SALPQEVSIAASRPSRGWRSSRTSVSRHRDTENTRSSRSKTGSLQLIC 182


>sp|A5EEC1|RNH2_BRASB Ribonuclease HII OS=Bradyrhizobium sp. (strain
BTAi1 / ATCC BAA-1182) GN=rnhB PE=3 SV=2
Length = 289

Score = 31.2 bits (69), Expect = 4.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +2

Query: 83 YGQPQGRATAARLAASTHHR*IYAP---SHRLLLPWA 184
YG P+ A RL S HHR ++AP + R PWA
Sbjct: 230 YGVPEHLAALDRLGPSVHHRSLFAPVVAARRKHQPWA 266


>sp|Q6P1G0|HEAT6_MOUSE HEAT repeat-containing protein 6 OS=Mus
musculus GN=Heatr6 PE=2 SV=1
Length = 1184

Score = 31.2 bits (69), Expect = 4.6
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -3

Query: 496 LCLSQAGLSFLCQPLQHLQKHEMMSSLHGTLLSTPYFQDYEEMKSCWSLLNELK 335
LCLS G +L +P QH+ + T+L +P D +++ C L N LK
Sbjct: 192 LCLSVPGQPYLEEPYQHVCFQAFL-----TILQSPKSSDMDDITFCMLLQNALK 240


>sp|Q8R4S4|AHR_MUSSI Aryl hydrocarbon receptor OS=Mus spicilegus
GN=Ahr PE=2 SV=1
Length = 854

Score = 31.2 bits (69), Expect = 4.6
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = -3

Query: 547 KHAFVPQTFPSSNPVLKLCLSQAGLSFLCQPLQHLQKHEMMSSLHGTLLSTPY 389
KH + TF S NP +SF C P Q L+ +++ SSL GT PY
Sbjct: 651 KHTQINGTFASWNPT-------PPVSFNC-PQQELKHYQLFSSLQGTAQEFPY 695


>sp|Q8R4S5|AHR_MUSMM Aryl hydrocarbon receptor OS=Mus musculus
molossinus GN=Ahr PE=2 SV=1
Length = 883

Score = 31.2 bits (69), Expect = 4.6
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = -3

Query: 547 KHAFVPQTFPSSNPVLKLCLSQAGLSFLCQPLQHLQKHEMMSSLHGTLLSTPY 389
KH + TF S NP +SF C P Q L+ +++ SSL GT PY
Sbjct: 645 KHTQINGTFASWNPT-------PPVSFNC-PQQELKHYQLFSSLQGTAQEFPY 689


>sp|Q8R4S6|AHR_MUSMC Aryl hydrocarbon receptor OS=Mus musculus
castaneus GN=Ahr PE=2 SV=1
Length = 848

Score = 31.2 bits (69), Expect = 4.6
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = -3

Query: 547 KHAFVPQTFPSSNPVLKLCLSQAGLSFLCQPLQHLQKHEMMSSLHGTLLSTPY 389
KH + TF S NP +SF C P Q L+ +++ SSL GT PY
Sbjct: 645 KHTQINGTFASWNPT-------PPVSFNC-PQQELKHYQLFSSLQGTAQEFPY 689


>sp|P30561|AHR_MOUSE Aryl hydrocarbon receptor OS=Mus musculus
GN=Ahr PE=1 SV=3
Length = 848

Score = 31.2 bits (69), Expect = 4.6
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = -3

Query: 547 KHAFVPQTFPSSNPVLKLCLSQAGLSFLCQPLQHLQKHEMMSSLHGTLLSTPY 389
KH + TF S NP +SF C P Q L+ +++ SSL GT PY
Sbjct: 645 KHTQINGTFASWNPT-------PPVSFNC-PQQELKHYQLFSSLQGTAQEFPY 689


>sp|P01261|CALC_SHEEP Calcitonin OS=Ovis aries GN=CALCA PE=1 SV=2
Length = 143

Score = 30.8 bits (68), Expect = 6.1
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 7/132 (5%)
Frame = -3

Query: 523 FPSSNPVLK---LCLSQAG---LSFLCQPLQHLQKHEMMSSLHGTLLSTPYFQDYEEMKS 362
F S+P L L L QAG + L L+ L +S G LL + Y + K+
Sbjct: 3 FGKSSPFLAFSILVLCQAGSLQATPLRSALETLPDPGALSEKEGRLLLAALVKAYVQRKT 62

Query: 361 CWSLLNELKKESP*RNTEGQESPQLKVSFCVNVCACTHTN*LWKSA-IVSLWC*KGRAPE 185
NEL++E TE + C N+ C + WK + G PE
Sbjct: 63 -----NELEQEEEQEETEDSSLDSSRAKRCSNLSTCV-LSAYWKDLNNYHRYSGMGFGPE 116

Query: 184 GPWKKQTVRRSI 149
P KK+ + S+
Sbjct: 117 TPGKKRDIANSL 128


>sp|Q8R4S2|AHR_MUSSP Aryl hydrocarbon receptor OS=Mus spretus GN=Ahr
PE=2 SV=1
Length = 854

Score = 30.8 bits (68), Expect = 6.1
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = -3

Query: 547 KHAFVPQTFPSSNPVLKLCLSQAGLSFLCQPLQHLQKHEMMSSLHGTLLSTPY 389
KH + TF S NP +SF C P Q L+ +++ SSL GT PY
Sbjct: 651 KHTQINGTFASWNPT-------PPVSFNC-PQQELKHYQIFSSLQGTAQEFPY 695


tr_hit_id Q9LK74
Definition tr|Q9LK74|Q9LK74_ARATH Similarity to SRC2 protein (At3g16510) OS=Arabidopsis thaliana
Align length 30
Score (bit) 37.0
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955634|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_K02, 5'
(633 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9LK74|Q9LK74_ARATH Similarity to SRC2 protein (At3g16510) OS... 37 1.00
tr|Q94I72|Q94I72_ORYSA Putative shock protein OS=Oryza sativa GN... 36 2.2
tr|Q93W71|Q93W71_ORYSJ Putative shock protein SRC2 OS=Oryza sati... 36 2.2
tr|Q0JMR3|Q0JMR3_ORYSJ Os01g0369500 protein (Fragment) OS=Oryza ... 36 2.2
tr|B8A887|B8A887_ORYSI Putative uncharacterized protein OS=Oryza... 36 2.2
tr|A2ZT70|A2ZT70_ORYSJ Putative uncharacterized protein OS=Oryza... 36 2.2
tr|A7NW38|A7NW38_VITVI Chromosome chr5 scaffold_2, whole genome ... 35 2.9
tr|Q8GS52|Q8GS52_ORYSJ Os07g0670300 protein OS=Oryza sativa subs... 35 3.8
tr|A2YPS8|A2YPS8_ORYSI Putative uncharacterized protein OS=Oryza... 35 3.8
tr|A8LU21|A8LU21_DINSH Putative uncharacterized protein OS=Dinor... 35 4.9
tr|A9RX58|A9RX58_PHYPA Predicted protein OS=Physcomitrella paten... 35 5.0
tr|A9T0I1|A9T0I1_PHYPA Predicted protein OS=Physcomitrella paten... 34 6.5
tr|A7XAJ8|A7XAJ8_9CONI SRC2 protein OS=Taiwania cryptomerioides ... 34 6.5
tr|A7EL81|A7EL81_SCLS1 Putative uncharacterized protein OS=Scler... 34 6.5
tr|A9TBB9|A9TBB9_PHYPA Predicted protein OS=Physcomitrella paten... 34 8.4
tr|A9RZ05|A9RZ05_PHYPA Predicted protein OS=Physcomitrella paten... 34 8.4

>tr|Q9LK74|Q9LK74_ARATH Similarity to SRC2 protein (At3g16510)
OS=Arabidopsis thaliana GN=At3g16510 PE=2 SV=1
Length = 360

Score = 37.0 bits (84), Expect = 1.00
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1

Query: 481 LEINIISAQDLKREKFVAQMHVYAVAWIRG 570
LE+N+ SA+DL+ + +M VYAV WI G
Sbjct: 6 LELNVYSAKDLENVNLITKMDVYAVVWITG 35


>tr|Q94I72|Q94I72_ORYSA Putative shock protein OS=Oryza sativa
GN=OSJNBa0010P20.22 PE=4 SV=1
Length = 339

Score = 35.8 bits (81), Expect = 2.2
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1

Query: 481 LEINIISAQDLKREKFVAQMHVYAVAWIRG 570
LE+ ++SA DLK+ ++MHVYAVA I G
Sbjct: 48 LELTLVSASDLKKVTLFSRMHVYAVASISG 77


>tr|Q93W71|Q93W71_ORYSJ Putative shock protein SRC2 OS=Oryza sativa
subsp. japonica GN=P0560B06.35 PE=4 SV=1
Length = 297

Score = 35.8 bits (81), Expect = 2.2
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1

Query: 481 LEINIISAQDLKREKFVAQMHVYAVAWIRG 570
LE+ ++SA DLK+ ++MHVYAVA I G
Sbjct: 6 LELTLVSASDLKKVTLFSRMHVYAVASISG 35


>tr|Q0JMR3|Q0JMR3_ORYSJ Os01g0369500 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os01g0369500 PE=4 SV=1
Length = 332

Score = 35.8 bits (81), Expect = 2.2
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1

Query: 481 LEINIISAQDLKREKFVAQMHVYAVAWIRG 570
LE+ ++SA DLK+ ++MHVYAVA I G
Sbjct: 41 LELTLVSASDLKKVTLFSRMHVYAVASISG 70


>tr|B8A887|B8A887_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_01954 PE=4 SV=1
Length = 295

Score = 35.8 bits (81), Expect = 2.2
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1

Query: 481 LEINIISAQDLKREKFVAQMHVYAVAWIRG 570
LE+ ++SA DLK+ ++MHVYAVA I G
Sbjct: 6 LELTLVSASDLKKVTLFSRMHVYAVASISG 35


>tr|A2ZT70|A2ZT70_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_001742 PE=4 SV=1
Length = 339

Score = 35.8 bits (81), Expect = 2.2
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1

Query: 481 LEINIISAQDLKREKFVAQMHVYAVAWIRG 570
LE+ ++SA DLK+ ++MHVYAVA I G
Sbjct: 48 LELTLVSASDLKKVTLFSRMHVYAVASISG 77


>tr|A7NW38|A7NW38_VITVI Chromosome chr5 scaffold_2, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00019769001
PE=4 SV=1
Length = 278

Score = 35.4 bits (80), Expect = 2.9
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1

Query: 481 LEINIISAQDLKREKFVAQMHVYAVAWIRGRLQAK 585
LEIN+ISA+DLK +++M VY V I G ++K
Sbjct: 6 LEINVISAKDLKDVNLISKMDVYVVVSINGDSRSK 40


>tr|Q8GS52|Q8GS52_ORYSJ Os07g0670300 protein OS=Oryza sativa subsp.
japonica GN=P0470D12.106 PE=2 SV=1
Length = 310

Score = 35.0 bits (79), Expect = 3.8
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1

Query: 481 LEINIISAQDLKREKFVAQMHVYAVAWIRG 570
LE+ + SA+DLK F+++M VYAVA I G
Sbjct: 6 LEVTLHSARDLKNVNFISRMEVYAVATISG 35


>tr|A2YPS8|A2YPS8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_27278 PE=4 SV=1
Length = 310

Score = 35.0 bits (79), Expect = 3.8
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1

Query: 481 LEINIISAQDLKREKFVAQMHVYAVAWIRG 570
LE+ + SA+DLK F+++M VYAVA I G
Sbjct: 6 LEVTLHSARDLKNVNFISRMEVYAVATISG 35


>tr|A8LU21|A8LU21_DINSH Putative uncharacterized protein
OS=Dinoroseobacter shibae (strain DFL 12) GN=Dshi_4002
PE=4 SV=1
Length = 128

Score = 34.7 bits (78), Expect = 4.9
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = -2

Query: 227 RHRLSVVLEGKGTRRPMEEADGEKEHISIDDVYWQPILQQLPSPEVAHITSLRWFLALHH 48
R L L G E +G + +++DV QP QLP P + W LA HH
Sbjct: 27 RAELLAQLRALGISEVTAEYEGYGDSGNVEDVTVQPAEVQLPEPLATEVGDFAWSLAYHH 86