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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955637
Clone id TST39A01NGRL0023_K05
Library
Length 307
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_K05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TTCAAAGTTGGGCGGTGCTTTCTTCTTGTGTTCACAATGTCCGAGGAACGAAAGGTACCC
TCAGTCTTGCTGAAACTAGGAGGATATCCTTTCCTTGGGTCAAAAGTATCTGACAATCTA
AGAATGCACTACGGTGCTGTGTCCCCTGCTTACCCACGCCAATGAATGGCGTTCACCTGC
CTTGTCTTCAAGCATGGTTACTATCTATTCTACCAAAACCCCATTCACCCTTCTACCTGT
CCACCCTGTATTTGTGGTCGCTCCTACTGATAAGAGCTTTGCAGTTTATTTTCTTATGGG
TGGAGTG
■■Homology search results ■■ -
sp_hit_id P31691
Definition sp|P31691|ADT_ORYSJ ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica
Align length 29
Score (bit) 27.7
E-value 0.49
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955637|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_K05, 5'
         (307 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P31691|ADT_ORYSJ ADP,ATP carrier protein, mitochondrial OS=Or...    28   0.49 
sp|Q8DY84|OXAA2_STRA5 Membrane protein oxaA 2 OS=Streptococcus a...    31   1.7  
sp|A6NMZ5|O4C45_HUMAN Olfactory receptor 4C45 OS=Homo sapiens GN...    31   1.7  
sp|Q8E3U9|OXAA2_STRA3 Membrane protein oxaA 2 OS=Streptococcus a...    30   3.8  

>sp|P31691|ADT_ORYSJ ADP,ATP carrier protein, mitochondrial OS=Oryza
           sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1
          Length = 382

 Score = 27.7 bits (60), Expect(2) = 0.49
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 37  MSEERKVPSVLLKLGGYPFLGSKVSDNLR 123
           M+E+   P+VL K GG   LGS  S+ +R
Sbjct: 1   MAEQANQPTVLQKFGGQFHLGSSFSEGVR 29



 Score = 25.4 bits (54), Expect(2) = 0.49
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
 Frame = +2

Query: 245 PVFVVAPTDK---SFAVYFLMGGV 307
           P+F  AP +K   +F + FLMGGV
Sbjct: 68  PIFANAPAEKGGKNFMIDFLMGGV 91


>sp|Q8DY84|OXAA2_STRA5 Membrane protein oxaA 2 OS=Streptococcus
           agalactiae serotype V GN=oxaA2 PE=3 SV=1
          Length = 310

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 23/73 (31%), Positives = 34/73 (46%)
 Frame = +2

Query: 89  LSLGQKYLTI*ECTTVLCPLLTHANEWRSPALSSSMVTIYSTKTPFTLLPVHPVFVVAPT 268
           L+LGQK LT+    TV+  +L     W S             KT   L+P+  VF+    
Sbjct: 171 LNLGQKSLTL----TVIIAILYFVQSWLSMQGVPDEQR-QQMKTMMYLMPIMMVFMSISL 225

Query: 269 DKSFAVYFLMGGV 307
             S A+Y+ +GG+
Sbjct: 226 PASVALYWFIGGI 238


>sp|A6NMZ5|O4C45_HUMAN Olfactory receptor 4C45 OS=Homo sapiens
           GN=OR4C45 PE=2 SV=1
          Length = 311

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = +2

Query: 134 VLCPLLTHANEWRSPALSSSMVTIYST---KTPFTLLPVHPVFVVAPTDKSFAVY 289
           +LC L TH++E R  ALSS    I+       PF+ L + P     PTDK+  V+
Sbjct: 222 ILCFLRTHSSEGRRKALSSCASHIFIVILFFVPFSYLYLRPTSF--PTDKAVTVF 274


>sp|Q8E3U9|OXAA2_STRA3 Membrane protein oxaA 2 OS=Streptococcus
           agalactiae serotype III GN=oxaA2 PE=3 SV=1
          Length = 310

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 22/73 (30%), Positives = 34/73 (46%)
 Frame = +2

Query: 89  LSLGQKYLTI*ECTTVLCPLLTHANEWRSPALSSSMVTIYSTKTPFTLLPVHPVFVVAPT 268
           L+LGQK LT+    TV+  +L     W S             KT   ++P+  VF+    
Sbjct: 171 LNLGQKSLTL----TVIIAILYFVQSWLSMQGVPDEQR-QQMKTMMYVMPIAMVFMSISL 225

Query: 269 DKSFAVYFLMGGV 307
             S A+Y+ +GG+
Sbjct: 226 PASVALYWFIGGI 238
tr_hit_id A9NVC6
Definition tr|A9NVC6|A9NVC6_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 30
Score (bit) 28.1
E-value 2.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955637|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_K05, 5'
         (307 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NVC6|A9NVC6_PICSI Putative uncharacterized protein OS=Picea...    28   2.0  
tr|Q4WNZ3|Q4WNZ3_ASPFU Cytoskeleton organisation protein (Dec1),...    34   3.2  
tr|B0Y5T9|B0Y5T9_ASPFC Cytoskeleton organisation protein (Dec1),...    34   3.2  
tr|Q0DY33|Q0DY33_ORYSJ Os02g0718900 protein OS=Oryza sativa subs...    28   5.7  
tr|B8AHM8|B8AHM8_ORYSI Putative uncharacterized protein OS=Oryza...    27   7.3  
tr|A1CXN1|A1CXN1_NEOFI Cytoskeleton organisation protein (Dec1),...    33   9.4  

>tr|A9NVC6|A9NVC6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 390

 Score = 28.1 bits (61), Expect(2) = 2.0
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
 Frame = +2

Query: 230 LLPVH-PVFVVAPTDKSFAVY---FLMGGV 307
           L P H PVF+ AP +K F  +   FLMGGV
Sbjct: 70  LAPGHSPVFIPAPAEKGFKGFMIDFLMGGV 99



 Score = 26.6 bits (57), Expect(2) = 2.0
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +1

Query: 37  MSEERKVPSVLLKLGGYPFLGSKVSDNLRMHY-GAVSP 147
           M+E  K PSV+ K+    +LGS+++ + ++   GA+ P
Sbjct: 1   MAERPKYPSVVQKMSCQTYLGSRITPSWQVRQNGALQP 38


>tr|Q4WNZ3|Q4WNZ3_ASPFU Cytoskeleton organisation protein (Dec1),
           putative OS=Aspergillus fumigatus GN=AFUA_4G07460 PE=4
           SV=1
          Length = 940

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = +3

Query: 9   WAVLSSCVHNVRGTKGTLSLAETRRISFPWVKSI*QSKNA 128
           WAV S  +H+V+  K   + AETR+    ++K++ +S+NA
Sbjct: 294 WAVWSLLIHSVQNIKNAETTAETRKFIDEFIKAVPRSRNA 333


>tr|B0Y5T9|B0Y5T9_ASPFC Cytoskeleton organisation protein (Dec1),
           putative OS=Aspergillus fumigatus (strain CEA10 / CBS
           144.89 / FGSC A1163) GN=AFUB_064560 PE=4 SV=1
          Length = 940

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = +3

Query: 9   WAVLSSCVHNVRGTKGTLSLAETRRISFPWVKSI*QSKNA 128
           WAV S  +H+V+  K   + AETR+    ++K++ +S+NA
Sbjct: 294 WAVWSLLIHSVQNIKNAETTAETRKFIDEFIKAVPRSRNA 333


>tr|Q0DY33|Q0DY33_ORYSJ Os02g0718900 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0718900 PE=2 SV=1
          Length = 382

 Score = 27.7 bits (60), Expect(2) = 5.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 37  MSEERKVPSVLLKLGGYPFLGSKVSDNLR 123
           M+E+   P+VL K GG   LGS  S+ +R
Sbjct: 1   MAEQANQPTVLQKFGGQFHLGSSFSEGVR 29



 Score = 25.4 bits (54), Expect(2) = 5.7
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
 Frame = +2

Query: 245 PVFVVAPTDK---SFAVYFLMGGV 307
           P+F  AP +K   +F + FLMGGV
Sbjct: 68  PIFANAPAEKGGKNFMIDFLMGGV 91


>tr|B8AHM8|B8AHM8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_08713 PE=4 SV=1
          Length = 382

 Score = 27.3 bits (59), Expect(2) = 7.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 37  MSEERKVPSVLLKLGGYPFLGSKVSDNLR 123
           M+E+   P+VL K GG   LGS  S+ +R
Sbjct: 1   MAEQANHPTVLQKFGGQFHLGSSFSEGVR 29



 Score = 25.4 bits (54), Expect(2) = 7.3
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
 Frame = +2

Query: 245 PVFVVAPTDK---SFAVYFLMGGV 307
           P+F  AP +K   +F + FLMGGV
Sbjct: 68  PIFANAPAEKGGKNFMIDFLMGGV 91


>tr|A1CXN1|A1CXN1_NEOFI Cytoskeleton organisation protein (Dec1),
           putative OS=Neosartorya fischeri (strain ATCC 1020 / DSM
           3700 / NRRL 181) GN=NFIA_108760 PE=4 SV=1
          Length = 940

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = +3

Query: 9   WAVLSSCVHNVRGTKGTLSLAETRRISFPWVKSI*QSKNA 128
           WAV S  VH+V+  K T + AE R+    +++++ +S+NA
Sbjct: 294 WAVWSLLVHSVQNIKNTETTAEIRKFIDEFIEAVPKSRNA 333