| DK955644 |
| Clone id |
TST39A01NGRL0023_K12 |
| Library |
TST39 |
| Length |
476 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_K12. 5' end sequence. |
| Accession |
DK955644 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
- |
| Sequence |
ACACACTTGAAGAGCTTTCCAAATGGTTGGATACAACTGCCTGCAGAAGCCCACATGGCT GGATGGCCTCTTGAAAGAGAAGTTCTTCAGCGCTTGCGCGGCACATTCCAATTCCAAGAA GAATGAGAGGAATATATATTGCTTGGGCTGCTCTGTGGCCATTTGTCAGCATTGTCTACC TCACCATCCTCAATCTCATAAGCTTCTCCAGATCCGTCGGTATGTGTATCACGATGTCAT TCGTATGCAGGACATTCAGAAATTGATTGATTGTGCGCTTGTACAGCCTTACATCATCAA CAGTGCAAAGGTAGTGTTTTTGAACCAGAGGCCTCAGCCTCGGCCACCAAAGGTGCAGGG CAACGTGTGCGAAACATGCGAAAGGAGCTTACAAGATTCATACAAGTACTGCTGCCTTGC ATGCAAGGTGGAAGCTGCGATAAATCGAAGCAGTGACCTGCCTCGGTTGCTACGCC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q4KLU7 |
| Definition |
sp|Q4KLU7|PD5AB_XENLA Sister chromatid cohesion protein PDS5 homolog A-B OS=Xenopus laevis |
| Align length |
93 |
| Score (bit) |
32.0 |
| E-value |
1.5 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9U515 |
| Definition |
tr|A9U515|A9U515_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
| Align length |
153 |
| Score (bit) |
215.0 |
| E-value |
1.0e-54 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955644|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_K12, 5' (476 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9U515|A9U515_PHYPA Predicted protein (Fragment) OS=Physcomit... 215 1e-54 tr|A9RE16|A9RE16_PHYPA Predicted protein OS=Physcomitrella paten... 213 3e-54 tr|A9RE13|A9RE13_PHYPA Predicted protein OS=Physcomitrella paten... 209 7e-53 tr|Q1XG53|Q1XG53_CRYJA Putative zinc-binding protein OS=Cryptome... 205 8e-52 tr|A9U2I8|A9U2I8_PHYPA Predicted protein OS=Physcomitrella paten... 205 8e-52 tr|A9NR56|A9NR56_PICSI Putative uncharacterized protein OS=Picea... 197 2e-49 tr|A7P2P0|A7P2P0_VITVI Chromosome chr1 scaffold_5, whole genome ... 187 3e-46 tr|A7PYC0|A7PYC0_VITVI Chromosome chr15 scaffold_37, whole genom... 185 1e-45 tr|A7QVE5|A7QVE5_VITVI Chromosome chr2 scaffold_187, whole genom... 184 1e-45 tr|Q655W8|Q655W8_ORYSJ Os06g0666100 protein OS=Oryza sativa subs... 184 2e-45 tr|Q948W7|Q948W7_PEA Zinc-binding protein OS=Pisum sativum PE=2 ... 181 2e-44 tr|Q2V486|Q2V486_ARATH Uncharacterized protein At2g12646.1 (Puta... 179 8e-44 tr|Q9LZZ6|Q9LZZ6_ARATH Putative uncharacterized protein T4C21_80... 178 1e-43 tr|B6TVG2|B6TVG2_MAIZE Zinc-binding protein OS=Zea mays PE=2 SV=1 177 3e-43 tr|A7QS33|A7QS33_VITVI Chromosome undetermined scaffold_155, who... 175 9e-43 tr|A5CBF0|A5CBF0_VITVI Putative uncharacterized protein OS=Vitis... 175 9e-43 tr|Q6H889|Q6H889_ORYSJ Putative zinc-binding protein OS=Oryza sa... 174 2e-42 tr|B8AIX6|B8AIX6_ORYSI Putative uncharacterized protein OS=Oryza... 174 2e-42 tr|Q9FYJ5|Q9FYJ5_ARATH F17F8.4 OS=Arabidopsis thaliana PE=4 SV=1 172 6e-42 tr|A3BEE5|A3BEE5_ORYSJ Putative uncharacterized protein OS=Oryza... 172 7e-42 tr|A2YFZ0|A2YFZ0_ORYSI Putative uncharacterized protein OS=Oryza... 172 7e-42 tr|Q6H517|Q6H517_ORYSJ Os02g0172800 protein OS=Oryza sativa subs... 172 1e-41 tr|A2X1F5|A2X1F5_ORYSI Putative uncharacterized protein OS=Oryza... 171 2e-41 tr|A7P943|A7P943_VITVI Chromosome chr3 scaffold_8, whole genome ... 167 2e-40 tr|A9SPW0|A9SPW0_PHYPA Predicted protein OS=Physcomitrella paten... 154 2e-36 tr|A5BU40|A5BU40_VITVI Putative uncharacterized protein OS=Vitis... 152 1e-35 tr|A9PIS3|A9PIS3_POPJC Putative uncharacterized protein OS=Popul... 151 2e-35 tr|B7FIG8|B7FIG8_MEDTR Putative uncharacterized protein OS=Medic... 150 2e-35 tr|A9RFH9|A9RFH9_PHYPA Predicted protein (Fragment) OS=Physcomit... 150 2e-35 tr|A9RBK2|A9RBK2_PHYPA Predicted protein OS=Physcomitrella paten... 150 2e-35
>tr|A9U515|A9U515_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228346 PE=4 SV=1 Length = 152
Score = 215 bits (547), Expect = 1e-54 Identities = 100/153 (65%), Positives = 119/153 (77%), Gaps = 3/153 (1%) Frame = +2
Query: 23 MVGYNCL---QKPTWLDGLLKEKFFSACAAHSNSKKNERNIYCLGCSVAICQHCLPHHPQ 193 MVGY+ QKP WL+ LL EKFF CA H KKNERN++C+ C+ +CQHC+P H Q Sbjct: 1 MVGYDLSAIPQKPAWLESLLAEKFFVPCAKHGALKKNERNVFCMDCNAGVCQHCVPAH-Q 59
Query: 194 SHKLLQIRRYVYHDVIRMQDIQKLIDCALVQPYIINSAKVVFLNQRPQPRPPKVQGNVCE 373 +H +LQIRRYVYHDVIR+QDIQ+L+DC+ VQ YIINSA+VVFLNQRPQPRP K GN C Sbjct: 60 NHCILQIRRYVYHDVIRLQDIQRLLDCSTVQTYIINSARVVFLNQRPQPRPSKGMGNACG 119
Query: 374 TCERSLQDSYKYCCLACKVEAAINRSSDLPRLL 472 TC+RSLQDSY YC +ACKV+A +N SDL LL Sbjct: 120 TCDRSLQDSYAYCSVACKVDAIVNSGSDLSSLL 152
>tr|A9RE16|A9RE16_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_112207 PE=4 SV=1 Length = 257
Score = 213 bits (543), Expect = 3e-54 Identities = 100/153 (65%), Positives = 119/153 (77%), Gaps = 3/153 (1%) Frame = +2
Query: 23 MVGYNCL---QKPTWLDGLLKEKFFSACAAHSNSKKNERNIYCLGCSVAICQHCLPHHPQ 193 MVGY+ QKP WL+ LL EKFF +CA H KKNERN++C+ C+ +CQHC+P H Q Sbjct: 1 MVGYDLSVLPQKPAWLESLLAEKFFVSCAKHGALKKNERNVFCVDCNAGVCQHCVPAH-Q 59
Query: 194 SHKLLQIRRYVYHDVIRMQDIQKLIDCALVQPYIINSAKVVFLNQRPQPRPPKVQGNVCE 373 +H +LQIRRYVYHDVIR+QDIQ+L+DCA VQ YIINSA+VVFLNQRPQPRP K GN C Sbjct: 60 NHCILQIRRYVYHDVIRLQDIQRLLDCATVQTYIINSARVVFLNQRPQPRPSKGLGNACG 119
Query: 374 TCERSLQDSYKYCCLACKVEAAINRSSDLPRLL 472 TC+RSLQDSY YC +ACKV+A I+ DL LL Sbjct: 120 TCDRSLQDSYAYCSVACKVDAVISNGKDLSSLL 152
>tr|A9RE13|A9RE13_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_112256 PE=4 SV=1 Length = 257
Score = 209 bits (531), Expect = 7e-53 Identities = 96/153 (62%), Positives = 118/153 (77%), Gaps = 3/153 (1%) Frame = +2
Query: 23 MVGYNCL---QKPTWLDGLLKEKFFSACAAHSNSKKNERNIYCLGCSVAICQHCLPHHPQ 193 MVGY+ QKP WL+ LL E+FF CA H KKNERN++C+ C+ +CQHC+P H Q Sbjct: 1 MVGYDLSALPQKPAWLESLLAERFFVPCAKHGAFKKNERNVFCVDCNAGVCQHCVPDH-Q 59
Query: 194 SHKLLQIRRYVYHDVIRMQDIQKLIDCALVQPYIINSAKVVFLNQRPQPRPPKVQGNVCE 373 +H +LQIRRYVYHDVIR+QD+Q+L+DC+ VQ YIINSA+VVFLNQRPQPRP K GN C Sbjct: 60 NHCILQIRRYVYHDVIRLQDMQRLLDCSTVQTYIINSARVVFLNQRPQPRPSKGLGNACG 119
Query: 374 TCERSLQDSYKYCCLACKVEAAINRSSDLPRLL 472 TC+RSLQDSY YC +ACKV+A ++ DL LL Sbjct: 120 TCDRSLQDSYAYCSVACKVDAVVSSGKDLSTLL 152
>tr|Q1XG53|Q1XG53_CRYJA Putative zinc-binding protein OS=Cryptomeria japonica PE=2 SV=1 Length = 243
Score = 205 bits (522), Expect = 8e-52 Identities = 96/153 (62%), Positives = 119/153 (77%), Gaps = 3/153 (1%) Frame = +2
Query: 23 MVGYNCLQ---KPTWLDGLLKEKFFSACAAHSNSKKNERNIYCLGCSVAICQHCLPHHPQ 193 MVGY + KP WL+ LL ++FF AC H KKNE NI+C+ CS +ICQHCLP+H Q Sbjct: 1 MVGYPLPETPPKPAWLEALLTDRFFVACPRHLEIKKNENNIFCVDCSKSICQHCLPNH-Q 59
Query: 194 SHKLLQIRRYVYHDVIRMQDIQKLIDCALVQPYIINSAKVVFLNQRPQPRPPKVQGNVCE 373 SH+LLQ+RRYVYHDVIR+ DIQKL+DC+ VQ YIINSAKVVFLNQRPQ RP K N C+ Sbjct: 60 SHRLLQVRRYVYHDVIRLLDIQKLLDCSQVQTYIINSAKVVFLNQRPQSRPAKGLANSCQ 119
Query: 374 TCERSLQDSYKYCCLACKVEAAINRSSDLPRLL 472 TC+RSL +SY+YC ++CKV+AA+N+ L RL+ Sbjct: 120 TCDRSLAESYRYCSVSCKVDAALNKDKSLSRLI 152
>tr|A9U2I8|A9U2I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_173318 PE=4 SV=1 Length = 200
Score = 205 bits (522), Expect = 8e-52 Identities = 96/146 (65%), Positives = 114/146 (78%), Gaps = 3/146 (2%) Frame = +2
Query: 23 MVGYNCL---QKPTWLDGLLKEKFFSACAAHSNSKKNERNIYCLGCSVAICQHCLPHHPQ 193 MVGY+ QKP WL+ LL EKFF CA H KKNERN++C+ C+ +CQHC+P H Q Sbjct: 1 MVGYDLSTLPQKPAWLESLLGEKFFVPCAKHGALKKNERNVFCVDCNAGVCQHCVPAH-Q 59
Query: 194 SHKLLQIRRYVYHDVIRMQDIQKLIDCALVQPYIINSAKVVFLNQRPQPRPPKVQGNVCE 373 SH +LQIRRYVYHDVIR+QDIQ+L+DC+ VQ YIINSA+VVFLNQRPQPRP K GN C Sbjct: 60 SHCILQIRRYVYHDVIRLQDIQRLLDCSSVQTYIINSARVVFLNQRPQPRPSKGMGNACG 119
Query: 374 TCERSLQDSYKYCCLACKVEAAINRS 451 TC+RSLQD Y YC +ACKV+A I+ S Sbjct: 120 TCDRSLQDLYAYCSVACKVDAVISSS 145
>tr|A9NR56|A9NR56_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 233
Score = 197 bits (501), Expect = 2e-49 Identities = 88/141 (62%), Positives = 111/141 (78%) Frame = +2
Query: 47 KPTWLDGLLKEKFFSACAAHSNSKKNERNIYCLGCSVAICQHCLPHHPQSHKLLQIRRYV 226 KP WL+ LL +KFF AC H + KKNE NI+C+ CS +IC HCLP H +SH LLQ+RRYV Sbjct: 41 KPAWLEALLTDKFFVACPMHVDLKKNENNIFCIHCSRSICHHCLPTH-RSHHLLQVRRYV 99
Query: 227 YHDVIRMQDIQKLIDCALVQPYIINSAKVVFLNQRPQPRPPKVQGNVCETCERSLQDSYK 406 YHDVIR+ D+Q+L+DC+ VQ YIIN+A+VVFL QRPQ RP K N C+TCERSLQ+SY+ Sbjct: 100 YHDVIRLHDMQRLVDCSCVQTYIINNARVVFLKQRPQSRPAKGFSNYCKTCERSLQESYR 159
Query: 407 YCCLACKVEAAINRSSDLPRL 469 +CC+ACKVE+ +NR +L L Sbjct: 160 FCCIACKVESVLNRRQNLSSL 180
>tr|A7P2P0|A7P2P0_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030128001 PE=4 SV=1 Length = 261
Score = 187 bits (474), Expect = 3e-46 Identities = 78/148 (52%), Positives = 110/148 (74%) Frame = +2
Query: 29 GYNCLQKPTWLDGLLKEKFFSACAAHSNSKKNERNIYCLGCSVAICQHCLPHHPQSHKLL 208 G + + KP WLDGL+ E FF+ C H N +KNE+N++CL C +IC HCLP H +SH LL Sbjct: 23 GGDMVMKPAWLDGLMAETFFAGCGVHENRRKNEKNVFCLECCQSICPHCLPSH-RSHPLL 81
Query: 209 QIRRYVYHDVIRMQDIQKLIDCALVQPYIINSAKVVFLNQRPQPRPPKVQGNVCETCERS 388 Q+RRYVYHDV+R+ D++KLI+C+ +QPY INSAKV+FLNQRPQ R K N+C TC+R Sbjct: 82 QVRRYVYHDVVRLDDLEKLINCSYIQPYTINSAKVIFLNQRPQSRSCKGSANICFTCDRI 141
Query: 389 LQDSYKYCCLACKVEAAINRSSDLPRLL 472 LQ+ +++C ++CKV+ + + DL ++ Sbjct: 142 LQEPFRFCSISCKVDYMVYQGEDLSSII 169
>tr|A7PYC0|A7PYC0_VITVI Chromosome chr15 scaffold_37, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026380001 PE=4 SV=1 Length = 250
Score = 185 bits (469), Expect = 1e-45 Identities = 87/150 (58%), Positives = 108/150 (72%) Frame = +2
Query: 23 MVGYNCLQKPTWLDGLLKEKFFSACAAHSNSKKNERNIYCLGCSVAICQHCLPHHPQSHK 202 MV N L P WL+ LL+EKFF+AC H +KKNE+NI+CL C +IC HCL H +SH+ Sbjct: 1 MVSSNLL--PRWLEALLREKFFNACVIHEYAKKNEKNIFCLDCCTSICPHCLSPH-RSHR 57
Query: 203 LLQIRRYVYHDVIRMQDIQKLIDCALVQPYIINSAKVVFLNQRPQPRPPKVQGNVCETCE 382 LLQIRRYVYHDVIR+ D +KL+DCA VQ Y NSAKVVFLNQRPQ R + GN+C TC+ Sbjct: 58 LLQIRRYVYHDVIRLDDAEKLMDCASVQAYTTNSAKVVFLNQRPQTRQFRGSGNICSTCD 117
Query: 383 RSLQDSYKYCCLACKVEAAINRSSDLPRLL 472 RSLQD Y +C L+CK++ + L + L Sbjct: 118 RSLQDPYHFCSLSCKIDYLLRTEGKLSKYL 147
>tr|A7QVE5|A7QVE5_VITVI Chromosome chr2 scaffold_187, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007302001 PE=4 SV=1 Length = 255
Score = 184 bits (468), Expect = 1e-45 Identities = 88/142 (61%), Positives = 106/142 (74%) Frame = +2
Query: 20 QMVGYNCLQKPTWLDGLLKEKFFSACAAHSNSKKNERNIYCLGCSVAICQHCLPHHPQSH 199 +MVG+ C P WL+ LL EKFF+AC H +KKNE+NI+CL C +IC HCL H + H Sbjct: 2 KMVGFGC-DIPHWLEILLGEKFFNACVVHECAKKNEKNIFCLDCCTSICPHCLLPH-RHH 59
Query: 200 KLLQIRRYVYHDVIRMQDIQKLIDCALVQPYIINSAKVVFLNQRPQPRPPKVQGNVCETC 379 +LLQIRRYVYHDVIR+ D Q+L+DC+LVQ Y NSAKVVFLNQRP RP + GN+C TC Sbjct: 60 RLLQIRRYVYHDVIRLDDAQELMDCSLVQSYTTNSAKVVFLNQRPMSRPFRGSGNLCYTC 119
Query: 380 ERSLQDSYKYCCLACKVEAAIN 445 ERSLQD Y +C LACKV +N Sbjct: 120 ERSLQDPYLFCSLACKVHHTMN 141
>tr|Q655W8|Q655W8_ORYSJ Os06g0666100 protein OS=Oryza sativa subsp. japonica GN=P0637D03.10 PE=2 SV=1 Length = 261
Score = 184 bits (466), Expect = 2e-45 Identities = 79/142 (55%), Positives = 105/142 (73%) Frame = +2
Query: 47 KPTWLDGLLKEKFFSACAAHSNSKKNERNIYCLGCSVAICQHCLPHHPQSHKLLQIRRYV 226 +P W+ GL++E FF C AH + KKNE+NI+CLGC +IC HC P H + H LLQ+RRYV Sbjct: 4 RPGWVGGLVEESFFVGCPAHESRKKNEKNIFCLGCCASICPHCAPSH-RHHPLLQVRRYV 62
Query: 227 YHDVIRMQDIQKLIDCALVQPYIINSAKVVFLNQRPQPRPPKVQGNVCETCERSLQDSYK 406 Y+DV+R+ D+ KLIDC+ VQPY INSAKV+FL RPQ RP K GN+C TC+R LQ+ + Sbjct: 63 YNDVVRLDDLDKLIDCSFVQPYTINSAKVIFLKPRPQSRPFKGSGNICLTCDRILQEPFH 122
Query: 407 YCCLACKVEAAINRSSDLPRLL 472 +CCL+CKV+ + + DL +L Sbjct: 123 FCCLSCKVDHVMMQGGDLSNIL 144
|