DK955650 |
Clone id |
TST39A01NGRL0023_K18 |
Library |
TST39 |
Length |
527 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_K18. 5' end sequence. |
Accession |
DK955650 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL375Contig1 |
Sequence |
GGTGCTATTAAAGTCATCACAGCTTTCGCTCGTGAAAACGGATAGATCGCAGAAGAGAGG TCCATGGCCATGGCAGCGACAGTGTCGCGTCCGGCATCTTTTGTAGTGACTGTTCCTCTT CCTAAGATGAGTACTTGTTTCCAAGGCCTCTCTCTGCAAGTGCAGCAACGCCCCGCCATC TCTGGGCCTCTCTCCACCTCCTCGCAGGGTTCTCAACTTCCCATCGTGTCCCAACAAAAG CACTACAAGGCGAAGACGCACCATGCTTCCGCCAAGCGATTCCGGGTTACTGGCCGTCGT TTTACTACGTCGAGAAGAGCAGGAAAACAGCATTTGTTGTGGAAGAAGAACACCAAGAGA AGGAAGCGTCTGTCAAAGATGGCCCTTGTAGAGAAGTGTGATTATCAAAACATCACTCGT GCTCTTCCCTATTTGAAAGTTTCAAAATCATGAGTCTTCTACGGCAAGGCCGCTTCACCC AAGAAGAGTGAGTGATTCCCTATGAGCTTCTTAGAGAGAGTGGATGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P23326 |
Definition |
sp|P23326|RK35_SPIOL 50S ribosomal protein L35, chloroplastic OS=Spinacia oleracea |
Align length |
106 |
Score (bit) |
95.9 |
E-value |
1.0e-19 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q84K87 |
Definition |
tr|Q84K87|Q84K87_MAIZE 50S ribosomal protein L35 OS=Zea mays |
Align length |
140 |
Score (bit) |
104.0 |
E-value |
2.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955650|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_K18, 5' (527 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q84K87|Q84K87_MAIZE 50S ribosomal protein L35 OS=Zea mays GN=... 104 2e-21 tr|B6TBA3|B6TBA3_MAIZE 50S ribosomal protein L35 OS=Zea mays PE=... 104 3e-21 tr|Q67W51|Q67W51_ORYSJ 50S ribosomal protein L35 OS=Oryza sativa... 103 4e-21 tr|A2YFL7|A2YFL7_ORYSI 50S ribosomal protein L35 OS=Oryza sativa... 103 4e-21 tr|A9NKM1|A9NKM1_PICSI 50S ribosomal protein L35 OS=Picea sitche... 103 7e-21 tr|A5BPA4|A5BPA4_VITVI 50S ribosomal protein L35 OS=Vitis vinife... 102 1e-20 tr|A7QZA8|A7QZA8_VITVI 50S ribosomal protein L35 OS=Vitis vinife... 100 3e-20 tr|Q84VR0|Q84VR0_MAIZE 50S ribosomal protein L35 (Fragment) OS=Z... 100 6e-20 tr|Q84VR3|Q84VR3_MAIZE 50S ribosomal protein L35 (Fragment) OS=Z... 98 2e-19 tr|Q84VR2|Q84VR2_MAIZE 50S ribosomal protein L35 (Fragment) OS=Z... 96 1e-18 tr|Q84VR4|Q84VR4_MAIZE 50S ribosomal protein L35 (Fragment) OS=Z... 95 2e-18 tr|B7FGY3|B7FGY3_MEDTR Putative uncharacterized protein OS=Medic... 95 2e-18 tr|A9PBS9|A9PBS9_POPTR 50S ribosomal protein L35 OS=Populus tric... 94 4e-18 tr|Q9LWB6|Q9LWB6_ARATH 50S ribosomal protein L35 OS=Arabidopsis ... 94 5e-18 tr|Q8VZ55|Q8VZ55_ARATH 50S ribosomal protein L35 OS=Arabidopsis ... 94 5e-18 tr|A9TWE0|A9TWE0_PHYPA 50S ribosomal protein L35 OS=Physcomitrel... 77 5e-13 tr|A9TUC8|A9TUC8_PHYPA 50S ribosomal protein L35 (Fragment) OS=P... 77 5e-13 tr|O82237|O82237_ARATH 50S ribosomal protein L35 OS=Arabidopsis ... 71 4e-11 tr|B8HPI6|B8HPI6_9CHRO Ribosomal protein L35 OS=Cyanothece sp. P... 60 9e-08 tr|B4VNM3|B4VNM3_9CYAN Ribosomal protein L35 OS=Microcoleus chth... 59 1e-07 tr|A1HTD0|A1HTD0_9FIRM 50S ribosomal protein L35 OS=Thermosinus ... 59 1e-07 tr|Q7XYL4|Q7XYL4_BIGNA 50S ribosomal protein L35 (Fragment) OS=B... 59 2e-07 tr|A3YWL8|A3YWL8_9SYNE 50S ribosomal protein L35 OS=Synechococcu... 57 4e-07 tr|B2J0D1|B2J0D1_NOSP7 Ribosomal protein L35 OS=Nostoc punctifor... 57 6e-07 tr|B7C325|B7C325_9FIRM Putative uncharacterized protein OS=Roseb... 57 7e-07 tr|B5W9E8|B5W9E8_SPIMA Ribosomal protein L35 OS=Arthrospira maxi... 57 7e-07 tr|B5YLD0|B5YLD0_THEYD Ribosomal protein L35 OS=Thermodesulfovib... 56 1e-06 tr|B1X4K4|B1X4K4_PAUCH 50S ribosomal protein L35 OS=Paulinella c... 56 1e-06 tr|A6BKH0|A6BKH0_9FIRM 50S ribosomal protein L35 OS=Dorea longic... 55 2e-06 tr|A0ZI58|A0ZI58_NODSP 50S ribosomal protein L35 OS=Nodularia sp... 55 2e-06
>tr|Q84K87|Q84K87_MAIZE 50S ribosomal protein L35 OS=Zea mays GN=prpl35-1 PE=2 SV=1 Length = 143
Score = 104 bits (260), Expect = 2e-21 Identities = 65/140 (46%), Positives = 82/140 (58%), Gaps = 12/140 (8%) Frame = +1
Query: 64 MAMAATVSRPASFVVTV-----PLPKMSTCFQGLSL----QVQQRPAISGPLS---TSSQ 207 MA++ +++RPA V+ LP S F S +++ PL +S Sbjct: 1 MALSLSLARPAPLAVSAGAGARKLPAASLAFPAKSFFGAPLAATAASVASPLPRKPATST 60
Query: 208 GSQLPIVSQQKHYKAKTHHASAKRFRVTGRRFTTSRRAGKQHLLWKKNTKRRKRLSKMAL 387 S + + +K YK KTH ASAKRFRVTGR R AGKQHLL KKNTKR+KRLSKM Sbjct: 61 TSLEVVAAGKKGYKMKTHKASAKRFRVTGRGKIVRRCAGKQHLLAKKNTKRKKRLSKMVQ 120
Query: 388 VEKCDYQNITRALPYLKVSK 447 V K DY N+T ALPYLKV++ Sbjct: 121 VNKSDYDNVTGALPYLKVNR 140
>tr|B6TBA3|B6TBA3_MAIZE 50S ribosomal protein L35 OS=Zea mays PE=2 SV=1 Length = 143
Score = 104 bits (259), Expect = 3e-21 Identities = 65/140 (46%), Positives = 82/140 (58%), Gaps = 12/140 (8%) Frame = +1
Query: 64 MAMAATVSRPASFVVTV-----PLPKMSTCFQGLSL----QVQQRPAISGPLS---TSSQ 207 MA++ +++RPA V+ LP S F S +++ PL +S Sbjct: 1 MALSLSLARPAPLAVSAGAGARKLPAASLAFPAKSFFGAPLAATAASVASPLPRKPATST 60
Query: 208 GSQLPIVSQQKHYKAKTHHASAKRFRVTGRRFTTSRRAGKQHLLWKKNTKRRKRLSKMAL 387 S +V+ + YK KTH ASAKRFRVTGR R AGKQHLL KKNTKR+KRLSKM Sbjct: 61 TSLEVVVAGKNGYKMKTHKASAKRFRVTGRGKIVRRCAGKQHLLAKKNTKRKKRLSKMVQ 120
Query: 388 VEKCDYQNITRALPYLKVSK 447 V K DY N+T ALPYLKV++ Sbjct: 121 VNKSDYDNVTGALPYLKVNR 140
>tr|Q67W51|Q67W51_ORYSJ 50S ribosomal protein L35 OS=Oryza sativa subsp. japonica GN=OJ1226_A12.25 PE=2 SV=1 Length = 146
Score = 103 bits (258), Expect = 4e-21 Identities = 53/76 (69%), Positives = 59/76 (77%) Frame = +1
Query: 223 IVSQQKHYKAKTHHASAKRFRVTGRRFTTSRRAGKQHLLWKKNTKRRKRLSKMALVEKCD 402 +V+ K YK KTH ASAKRFRVTGR RRAGKQHLL KKNTKRRKRLSKM V K D Sbjct: 69 VVAAGKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLSKKNTKRRKRLSKMIQVNKSD 128
Query: 403 YQNITRALPYLKVSKS 450 Y N+T ALPYLKV+++ Sbjct: 129 YNNVTGALPYLKVNRN 144
>tr|A2YFL7|A2YFL7_ORYSI 50S ribosomal protein L35 OS=Oryza sativa subsp. indica GN=OsI_23900 PE=3 SV=1 Length = 146
Score = 103 bits (258), Expect = 4e-21 Identities = 53/76 (69%), Positives = 59/76 (77%) Frame = +1
Query: 223 IVSQQKHYKAKTHHASAKRFRVTGRRFTTSRRAGKQHLLWKKNTKRRKRLSKMALVEKCD 402 +V+ K YK KTH ASAKRFRVTGR RRAGKQHLL KKNTKRRKRLSKM V K D Sbjct: 69 VVAAGKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLSKKNTKRRKRLSKMIQVNKSD 128
Query: 403 YQNITRALPYLKVSKS 450 Y N+T ALPYLKV+++ Sbjct: 129 YNNVTGALPYLKVNRN 144
>tr|A9NKM1|A9NKM1_PICSI 50S ribosomal protein L35 OS=Picea sitchensis PE=2 SV=1 Length = 153
Score = 103 bits (256), Expect = 7e-21 Identities = 66/141 (46%), Positives = 78/141 (55%), Gaps = 13/141 (9%) Frame = +1
Query: 64 MAMAATVSRPASFVVTVPLPKMSTCFQGLSLQVQQRPAISGPLSTSSQGSQLPI------ 225 +A V RP + + LP S F+GLSL + + + S G Q I Sbjct: 13 LAHVFPVKRPLN---STTLPLSSLSFKGLSLNLSSNGSRATGFSQWVLGRQSAIHPRRQG 69
Query: 226 -------VSQQKHYKAKTHHASAKRFRVTGRRFTTSRRAGKQHLLWKKNTKRRKRLSKMA 384 V K YK KTH ASAKRFRVTGR RRAGKQHLL KKNTKR+ RLSKM Sbjct: 70 SGFETVTVVAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLVKKNTKRKNRLSKMT 129
Query: 385 LVEKCDYQNITRALPYLKVSK 447 V+K DY N+ ALPYLKV++ Sbjct: 130 YVDKSDYANVIGALPYLKVNR 150
>tr|A5BPA4|A5BPA4_VITVI 50S ribosomal protein L35 OS=Vitis vinifera GN=GSVIVT00009281001 PE=3 SV=1 Length = 153
Score = 102 bits (254), Expect = 1e-20 Identities = 68/141 (48%), Positives = 83/141 (58%), Gaps = 12/141 (8%) Frame = +1
Query: 61 SMAMAATVSRPASFVVTVPLPKMSTCFQGLSLQVQQRPAISG-----PLSTS-------S 204 S+ + ++ S P+S V + + S + SL++ ISG PL S S Sbjct: 11 SLRLPSSFSSPSSVRVPNEVVQFSPFSRACSLKLSSSRNISGFAPILPLRHSTLNSPSPS 70
Query: 205 QGSQLPIVSQQKHYKAKTHHASAKRFRVTGRRFTTSRRAGKQHLLWKKNTKRRKRLSKMA 384 Q S L +VS K YK KTH ASAKRFRVTGR RRAGKQHLL KKN KRR RLSKM Sbjct: 71 QPSSLTVVSA-KGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLAKKNAKRRLRLSKMH 129
Query: 385 LVEKCDYQNITRALPYLKVSK 447 V + DY N+ ALPYLKV++ Sbjct: 130 PVSRSDYDNVIGALPYLKVNR 150
>tr|A7QZA8|A7QZA8_VITVI 50S ribosomal protein L35 OS=Vitis vinifera GN=GSVIVT00010569001 PE=3 SV=1 Length = 153
Score = 100 bits (250), Expect = 3e-20 Identities = 67/140 (47%), Positives = 82/140 (58%), Gaps = 12/140 (8%) Frame = +1
Query: 64 MAMAATVSRPASFVVTVPLPKMSTCFQGLSLQVQQRPAISG-----PLSTS-------SQ 207 + + ++ S P+S V + + S + SL++ ISG PL S SQ Sbjct: 12 LRLPSSFSSPSSVRVPNEVVQFSPFSRACSLKLSSSRNISGFAPILPLRHSTLNSPSPSQ 71
Query: 208 GSQLPIVSQQKHYKAKTHHASAKRFRVTGRRFTTSRRAGKQHLLWKKNTKRRKRLSKMAL 387 S L +VS K YK KTH ASAKRFRVTGR RRAGKQHLL KKN KRR RLSKM Sbjct: 72 PSSLTVVSA-KGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLAKKNAKRRLRLSKMHP 130
Query: 388 VEKCDYQNITRALPYLKVSK 447 V + DY N+ ALPYLKV++ Sbjct: 131 VSRSDYDNVIGALPYLKVNR 150
>tr|Q84VR0|Q84VR0_MAIZE 50S ribosomal protein L35 (Fragment) OS=Zea mays GN=prpl35-1 PE=2 SV=1 Length = 120
Score = 100 bits (248), Expect = 6e-20 Identities = 61/125 (48%), Positives = 79/125 (63%) Frame = +1
Query: 73 AATVSRPASFVVTVPLPKMSTCFQGLSLQVQQRPAISGPLSTSSQGSQLPIVSQQKHYKA 252 AA+++ PA PL + ++ + ++PA S +TS + + + +K YK Sbjct: 3 AASLAFPAKSFFGAPLAATAA---SVASPLPRKPATS---TTSLE----VVAAGKKGYKM 52
Query: 253 KTHHASAKRFRVTGRRFTTSRRAGKQHLLWKKNTKRRKRLSKMALVEKCDYQNITRALPY 432 KTH ASAKRFRVTGR R AGKQHLL KKNTKR+KRLSKM V K DY N+T ALPY Sbjct: 53 KTHKASAKRFRVTGRGKIVRRCAGKQHLLAKKNTKRKKRLSKMVQVNKSDYDNVTGALPY 112
Query: 433 LKVSK 447 LKV++ Sbjct: 113 LKVNR 117
>tr|Q84VR3|Q84VR3_MAIZE 50S ribosomal protein L35 (Fragment) OS=Zea mays GN=prpl35-1 PE=3 SV=1 Length = 76
Score = 98.2 bits (243), Expect = 2e-19 Identities = 50/71 (70%), Positives = 55/71 (77%) Frame = +1
Query: 235 QKHYKAKTHHASAKRFRVTGRRFTTSRRAGKQHLLWKKNTKRRKRLSKMALVEKCDYQNI 414 +K YK KTH ASAKRFRVTGR R AGKQHLL KKNTKR+KRLSKM V K DY N+ Sbjct: 3 KKGYKMKTHKASAKRFRVTGRGKIVRRCAGKQHLLAKKNTKRKKRLSKMVQVNKSDYDNV 62
Query: 415 TRALPYLKVSK 447 T ALPYLKV++ Sbjct: 63 TGALPYLKVNR 73
>tr|Q84VR2|Q84VR2_MAIZE 50S ribosomal protein L35 (Fragment) OS=Zea mays GN=prpl35-3 PE=3 SV=1 Length = 75
Score = 95.9 bits (237), Expect = 1e-18 Identities = 49/71 (69%), Positives = 54/71 (76%) Frame = +1
Query: 235 QKHYKAKTHHASAKRFRVTGRRFTTSRRAGKQHLLWKKNTKRRKRLSKMALVEKCDYQNI 414 +K YK KTH ASAKRFRVTGR R AG QHLL KKNTKR+KRLSKM V K DY N+ Sbjct: 2 KKGYKMKTHKASAKRFRVTGRGKIVRRCAGTQHLLAKKNTKRKKRLSKMVQVNKSDYDNV 61
Query: 415 TRALPYLKVSK 447 T ALPYLKV++ Sbjct: 62 TGALPYLKVNR 72
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