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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955653
Clone id TST39A01NGRL0023_K22
Library
Length 478
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_K22. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
CTGGATGGGGCCACTAATCAGGCGGAGATCTTGAAGAATGCAGAGGCGATGATGATGATG
ATGATGATGCAGCAGAACAGAAGCCATGAAAGCTCTGCGCATTCTTTTGTCAAAGGTGAT
GACACGCATGTTATGGCCTCCTCGCCGCCGAACGAGACTCACCTGCATTTGGGGCTTTGG
TCTCATTTCCCAGCTAACCCTAGGTCCAGCCCCTCCATCTCCGGCGCGCACTTCCTTGAT
GCCTGCTTCCTCTGCAAACGACGTCTTCGACATGAGCGAGACATCTTCATCTACAGGGGA
GACATTGCATTTTGCTCAGAGGAATGTAGACATCGCCAAATCTTAATTGATGAAACACGC
TCTTCAAGAGCTTGTAGGAAAGGAGGAGCCGCTTTGGGGACCACTCCATGAAAGTGGCGT
CATTTAACATTGACAAAACTCTTCTTCATTTTCCAAGTGAGGCCTTTCTCGAAAAAGC
■■Homology search results ■■ -
sp_hit_id Q9SAF4
Definition sp|Q9SAF4|FBK3_ARATH Putative F-box/Kelch-repeat protein At1g13200 OS=Arabidopsis thaliana
Align length 74
Score (bit) 32.7
E-value 0.87
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955653|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_K22, 5'
         (478 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9SAF4|FBK3_ARATH Putative F-box/Kelch-repeat protein At1g132...    33   0.87 
sp|A6NFQ2|F115C_HUMAN Protein FAM115C OS=Homo sapiens GN=FAM115C...    31   3.3  
sp|Q6ZT46|YK027_HUMAN Putative uncharacterized protein FLJ44967 ...    30   7.4  
sp|Q6S001|KIF11_DICDI Kinesin-related protein 11 OS=Dictyosteliu...    30   7.4  
sp|Q7TPK6|WNK4_RAT Serine/threonine-protein kinase WNK4 OS=Rattu...    29   9.6  
sp|P98091|MUCS_BOVIN Submaxillary mucin-like protein OS=Bos taur...    29   9.6  
sp|Q6PAL7|AHDC1_MOUSE A.T hook DNA-binding motif-containing prot...    29   9.6  

>sp|Q9SAF4|FBK3_ARATH Putative F-box/Kelch-repeat protein At1g13200
           OS=Arabidopsis thaliana GN=At1g13200 PE=4 SV=1
          Length = 435

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 16/74 (21%)
 Frame = +2

Query: 227 RTSLMPASSANDVFD----------------MSETSSSTGETLHFAQRNVDIAKS*LMKH 358
           R  ++P+S  NDV +                +S+   ST E+  F +R++ IAK   + H
Sbjct: 35  RVLMVPSSLPNDVLEEIFLRFPVKALIRLKSLSKQWRSTIESRSFEERHLTIAKKAFVDH 94

Query: 359 ALQELVGKEEPLWG 400
               LVG+E+P+ G
Sbjct: 95  PKVMLVGEEDPIRG 108


>sp|A6NFQ2|F115C_HUMAN Protein FAM115C OS=Homo sapiens GN=FAM115C
           PE=2 SV=2
          Length = 919

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = +2

Query: 68  CSRTEAMKALRILLSKVMTRMLWPPRRRTRLTCIWGFGLISQLT-----LGPAP 214
           C   +  KA ++  + V+T   W  R    ++C+WG GL+  +      LGP P
Sbjct: 576 CHTDDLTKARKLSRAPVVTHQCWMDRTERSVSCLWG-GLLYVIVPKGSQLGPVP 628


>sp|Q6ZT46|YK027_HUMAN Putative uncharacterized protein FLJ44967
           OS=Homo sapiens PE=5 SV=2
          Length = 303

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 191 QLTLGPAPPSPARTSLMPASSANDVFDMSETSSSTG 298
           Q   GP+ PSP+  SL+PAS+A  V   +   S  G
Sbjct: 77  QSCAGPSVPSPSPESLLPASAAPRVVGATSLGSGLG 112


>sp|Q6S001|KIF11_DICDI Kinesin-related protein 11 OS=Dictyostelium
           discoideum GN=kif11 PE=3 SV=1
          Length = 685

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 164 CIWGFGLISQLTLGPAPPSPARTSLMPASSANDVFDMSETSSSTG 298
           C+W FG  + +T  P P +   +SL P S+       S TS+S G
Sbjct: 25  CLWQFGNNNTITSLPPPITQPVSSLPPISTPIKSSSSSSTSTSAG 69


>sp|Q7TPK6|WNK4_RAT Serine/threonine-protein kinase WNK4 OS=Rattus
            norvegicus GN=Wnk4 PE=2 SV=3
          Length = 1222

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +2

Query: 179  GLISQLTLGPAPPSPARTSLMPASSANDVFDMSETSSSTGETLHFAQRN 325
            GL+SQ    PAPP P  +  +P +S     D    S+ T ET + A RN
Sbjct: 929  GLLSQSP--PAPPGPLPSMPLPLASC----DQESLSAQTAETENEASRN 971


>sp|P98091|MUCS_BOVIN Submaxillary mucin-like protein OS=Bos taurus
           PE=2 SV=1
          Length = 563

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +1

Query: 253 CKRRLRHERDIFIYRGDIAFCSEE-CRHRQILIDETRSSRACRKGGAALGTTP*KWRHL 426
           CK+ ++++ DIF  +     C EE   +R+I +D       C  G    GT P ++RH+
Sbjct: 498 CKKTIKYDYDIFQLKNSCLCCQEENYEYREIDLD-------CPDG----GTIPYRYRHI 545


>sp|Q6PAL7|AHDC1_MOUSE A.T hook DNA-binding motif-containing protein 1
            OS=Mus musculus GN=Ahdc1 PE=1 SV=1
          Length = 1594

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = +2

Query: 119  MTRMLWPPRRRTRLTCIWGFGLISQLTLGPAPPSPARTSLMP 244
            M R   PPR     T  +G  L+S LTL P P    R SL+P
Sbjct: 1512 MARPPGPPRGPAAATAGYGCPLLSDLTLSPVP----RDSLLP 1549
tr_hit_id A9NT09
Definition tr|A9NT09|A9NT09_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 72
Score (bit) 76.3
E-value 7.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955653|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_K22, 5'
         (478 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NT09|A9NT09_PICSI Putative uncharacterized protein OS=Picea...    76   7e-13
tr|A9NR36|A9NR36_PICSI Putative uncharacterized protein OS=Picea...    75   2e-12
tr|B6U9L9|B6U9L9_MAIZE Putative uncharacterized protein OS=Zea m...    74   3e-12
tr|B4G1W1|B4G1W1_MAIZE Putative uncharacterized protein OS=Zea m...    74   3e-12
tr|A9NZH8|A9NZH8_PICSI Putative uncharacterized protein OS=Picea...    74   3e-12
tr|Q2A991|Q2A991_BRAOL Putative uncharacterized protein OS=Brass...    74   5e-12
tr|B8LPG4|B8LPG4_PICSI Putative uncharacterized protein OS=Picea...    73   6e-12
tr|A9NNE9|A9NNE9_PICSI Putative uncharacterized protein OS=Picea...    73   6e-12
tr|B6UBM5|B6UBM5_MAIZE Putative uncharacterized protein OS=Zea m...    72   2e-11
tr|Q7XP52|Q7XP52_ORYSJ Os04g0586000 protein OS=Oryza sativa subs...    71   2e-11
tr|Q01K59|Q01K59_ORYSA H0307D04.7 protein OS=Oryza sativa GN=H03...    71   2e-11
tr|A2XWW0|A2XWW0_ORYSI Putative uncharacterized protein OS=Oryza...    71   2e-11
tr|Q8VZM9|Q8VZM9_ARATH Putative uncharacterized protein At4g1767...    70   4e-11
tr|Q8L9G6|Q8L9G6_ARATH Putative uncharacterized protein OS=Arabi...    70   4e-11
tr|O23607|O23607_ARATH Putative uncharacterized protein dl4870c ...    70   4e-11
tr|B6TYQ3|B6TYQ3_MAIZE Putative uncharacterized protein OS=Zea m...    70   5e-11
tr|Q6ZHB9|Q6ZHB9_ORYSJ Os02g0686700 protein OS=Oryza sativa subs...    69   1e-10
tr|B8AGR6|B8AGR6_ORYSI Putative uncharacterized protein OS=Oryza...    69   1e-10
tr|Q8GWT6|Q8GWT6_ARATH Putative uncharacterized protein At1g5388...    68   2e-10
tr|B6SU44|B6SU44_MAIZE Putative uncharacterized protein OS=Zea m...    68   3e-10
tr|B4FUH9|B4FUH9_MAIZE Putative uncharacterized protein OS=Zea m...    68   3e-10
tr|A7NV17|A7NV17_VITVI Chromosome chr18 scaffold_1, whole genome...    68   3e-10
tr|A2X8F2|A2X8F2_ORYSI Putative uncharacterized protein OS=Oryza...    67   3e-10
tr|Q9FGQ9|Q9FGQ9_ARATH Genomic DNA, chromosome 5, TAC clone:K14A...    67   4e-10
tr|Q8LDX2|Q8LDX2_ARATH Putative uncharacterized protein OS=Arabi...    67   4e-10
tr|B6SI69|B6SI69_MAIZE Putative uncharacterized protein OS=Zea m...    67   4e-10
tr|Q7XP55|Q7XP55_ORYSJ Os04g0585700 protein OS=Oryza sativa subs...    66   8e-10
tr|Q6ZHB6|Q6ZHB6_ORYSJ Putative uncharacterized protein OJ1717_A...    66   8e-10
tr|Q01K61|Q01K61_ORYSA H0307D04.5 protein OS=Oryza sativa GN=H03...    66   8e-10
tr|A2XWV7|A2XWV7_ORYSI Putative uncharacterized protein OS=Oryza...    66   8e-10

>tr|A9NT09|A9NT09_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 166

 Score = 76.3 bits (186), Expect = 7e-13
 Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 6/72 (8%)
 Frame = +1

Query: 172 GLWSHFPAN------PRSSPSISGAHFLDACFLCKRRLRHERDIFIYRGDIAFCSEECRH 333
           G+W  +P N      P    +   AHFL ACFLCKRRL   RDI++YRGD AFCS ECRH
Sbjct: 66  GIW--WPLNGFGFPRPNRRKNSEPAHFLHACFLCKRRLVPGRDIYMYRGDSAFCSIECRH 123

Query: 334 RQILIDETRSSR 369
           +QI++DE +  R
Sbjct: 124 QQIVLDERKEKR 135


>tr|A9NR36|A9NR36_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 132

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
 Frame = +1

Query: 160 HLHLGLWSHFPANPRSSPSISGAHFLDACFLCKRRLRHERDIFIYRGDIAFCSEECRHRQ 339
           H+  G+ S++     S+  I  AHFLDAC LC RRL   RDI++YRGD A CS ECR +Q
Sbjct: 29  HMESGITSNYSC---SNKRIEPAHFLDACRLCNRRLNDGRDIYMYRGDTALCSVECRQQQ 85

Query: 340 ILIDETRSSRACR-----KGGAALGTTP*KWRHLTLTKLFFIFQVRPFSK 474
           I +DE +   A R     KGG    +     R+    K  F+ Q   F++
Sbjct: 86  IDMDERKEKNAARITGMKKGGQISSSN----RYENSNKANFLAQTETFAE 131


>tr|B6U9L9|B6U9L9_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 93

 Score = 74.3 bits (181), Expect = 3e-12
 Identities = 33/56 (58%), Positives = 41/56 (73%)
 Frame = +1

Query: 223 GAHFLDACFLCKRRLRHERDIFIYRGDIAFCSEECRHRQILIDETRSSRACRKGGA 390
           GAHFLDACFLC++ L   RDIF+YRGD AFCS+ECR  Q+  DE  +++A  K  A
Sbjct: 7   GAHFLDACFLCRKPLAGNRDIFMYRGDTAFCSDECRSAQMAADEAAAAKAKAKAKA 62


>tr|B4G1W1|B4G1W1_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 93

 Score = 74.3 bits (181), Expect = 3e-12
 Identities = 33/56 (58%), Positives = 41/56 (73%)
 Frame = +1

Query: 223 GAHFLDACFLCKRRLRHERDIFIYRGDIAFCSEECRHRQILIDETRSSRACRKGGA 390
           GAHFLDACFLC++ L   RDIF+YRGD AFCS+ECR  Q+  DE  +++A  K  A
Sbjct: 7   GAHFLDACFLCRKPLAGNRDIFMYRGDTAFCSDECRSAQMAADEAAAAKAKAKAKA 62


>tr|A9NZH8|A9NZH8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 166

 Score = 74.3 bits (181), Expect = 3e-12
 Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 6/72 (8%)
 Frame = +1

Query: 172 GLWSHFPAN------PRSSPSISGAHFLDACFLCKRRLRHERDIFIYRGDIAFCSEECRH 333
           G+W  +P N      P    +   AHFL ACFLCKRRL   RDI++YRG+ AFCS ECRH
Sbjct: 66  GIW--WPLNGFGFPRPNRRKNSEPAHFLHACFLCKRRLVPGRDIYMYRGNSAFCSIECRH 123

Query: 334 RQILIDETRSSR 369
           +QI++DE +  R
Sbjct: 124 QQIVLDERKEKR 135


>tr|Q2A991|Q2A991_BRAOL Putative uncharacterized protein OS=Brassica
           oleracea GN=40.t00027 PE=4 SV=1
          Length = 168

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 30/47 (63%), Positives = 37/47 (78%)
 Frame = +1

Query: 229 HFLDACFLCKRRLRHERDIFIYRGDIAFCSEECRHRQILIDETRSSR 369
           HFLD+CFLCK+RL H +DIF+YRGD  FCSEECR  QI  DE++  +
Sbjct: 84  HFLDSCFLCKKRLGHNKDIFMYRGDTPFCSEECREEQIKRDESKEKK 130


>tr|B8LPG4|B8LPG4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 132

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 37/71 (52%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
 Frame = +1

Query: 205 SSPSISGAHFLDACFLCKRRLRHERDIFIYRGDIAFCSEECRHRQILIDETRSSRAC--- 375
           S+  I  AHFLDAC LC RRL + RDI++YRGD AFCS ECR  QI +DE +   A    
Sbjct: 41  SNKPIEPAHFLDACRLCNRRLSNGRDIYMYRGDTAFCSVECRQHQIDMDERKEKSAASIT 100

Query: 376 --RKGGAALGT 402
             +KGG  L +
Sbjct: 101 GMKKGGQVLSS 111


>tr|A9NNE9|A9NNE9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 142

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
 Frame = +1

Query: 205 SSPSISGAHFLDACFLCKRRLRHERDIFIYRGDIAFCSEECRHRQILIDETRSSRAC--- 375
           S+  I  AHFLDAC LC RRL   RDI++YRGD AFCS ECR +QI +DE +   A    
Sbjct: 51  SNKPIEPAHFLDACHLCNRRLSDGRDIYMYRGDTAFCSVECRQQQITMDERKEKSAAGIT 110

Query: 376 --RKGG 387
             +KGG
Sbjct: 111 GLKKGG 116


>tr|B6UBM5|B6UBM5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 90

 Score = 71.6 bits (174), Expect = 2e-11
 Identities = 33/59 (55%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
 Frame = +1

Query: 220 SGAHFLDACFLCKRRLRHERDIFIYRGDIAFCSEECRHRQILIDET----RSSRACRKG 384
           +G HFLDACFLC++ L   RDIF+YRGD AFCS+ECR  Q+  DE     R +RA  +G
Sbjct: 7   AGVHFLDACFLCRKPLAGNRDIFMYRGDTAFCSDECRSAQMAADEAAEKRRKARAVTRG 65


>tr|Q7XP52|Q7XP52_ORYSJ Os04g0586000 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0013K16.15 PE=4 SV=2
          Length = 127

 Score = 71.2 bits (173), Expect = 2e-11
 Identities = 32/54 (59%), Positives = 38/54 (70%)
 Frame = +1

Query: 229 HFLDACFLCKRRLRHERDIFIYRGDIAFCSEECRHRQILIDETRSSRACRKGGA 390
           H+LD CF C+R L   RDIF+YRGD+ FCSEECR  QI IDE R  R+ + G A
Sbjct: 54  HYLDICFRCRRPLGGNRDIFMYRGDMPFCSEECRQEQIEIDEAREQRSKQTGRA 107