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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955666
Clone id TST39A01NGRL0023_L11
Library
Length 546
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_L11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GCTCCGATCAAGTCCGACGTTGTACTTCTGTCATTGTTAGGGTTTAGGAAGAAGACAGGA
TAGACGATGAGGTTTTCCCAATGTTAGGGTCGAATTGAAGGGCTTCTTGTAGGAATTCGC
ACAAGGGTTTGTCTCTGTGTTTCTGCTAGAGGTCTTCATGGATTCAGACCAGGCCAAGAT
ATTTGTAGGTGGAATTTCTTGGGAGACATCAGAAGAGAAGCTCAAAGATTATTTCAGCAA
CTTCGGTAACGTCGTAGAGACCGTTATTGTGAAAGACAGAACTACCGGGAGAGCTCGGGG
CTTTGGTTTCGTGGCTTTCTCAGATTCTGCTAGCGTGGATAGAGTCACTCTCGAGAAGCA
CAGCATCGATGGCCGCATGGTGGAAGTCAAAAGAGCAGTCCCAAGAGATGAGCAGCAGAA
TTTACCTAGAAGCAGCAATGCAATTTCAGTTTCAGGAAATAGTGGTAGGACCACAAAAAT
TTTTGTTGGGGGATTAGCATCTACAGTGACTGAGGAAGATTTTAAGACATACTTTTCCCA
GTTCGG
■■Homology search results ■■ -
sp_hit_id O94432
Definition sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe
Align length 126
Score (bit) 119.0
E-value 9.0e-27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955666|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_L11, 5'
         (546 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15...   119   9e-27
sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein ...   114   2e-25
sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=M...   112   1e-24
sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=H...   112   1e-24
sp|O43347|MSI1H_HUMAN RNA-binding protein Musashi homolog 1 OS=H...   109   1e-23
sp|Q8K3P4|MSI1H_RAT RNA-binding protein Musashi homolog 1 OS=Rat...   108   1e-23
sp|Q61474|MSI1H_MOUSE RNA-binding protein Musashi homolog 1 OS=M...   108   1e-23
sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B...   108   2e-23
sp|P48809|RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27...   105   2e-22
sp|Q99729|ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B...   103   5e-22
sp|Q9Z130|HNRDL_MOUSE Heterogeneous nuclear ribonucleoprotein D-...   103   7e-22
sp|O14979|HNRDL_HUMAN Heterogeneous nuclear ribonucleoprotein D-...   103   7e-22
sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus G...   103   7e-22
sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis...   102   9e-22
sp|Q5ZI72|HNRDL_CHICK Heterogeneous nuclear ribonucleoprotein D-...   102   2e-21
sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens G...   102   2e-21
sp|Q640A2|HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-...   101   2e-21
sp|Q3SWU3|HNRDL_RAT Heterogeneous nuclear ribonucleoprotein D-li...   100   3e-21
sp|Q7ZX83|HNDLA_XENLA Heterogeneous nuclear ribonucleoprotein D-...   100   6e-21
sp|P07909|ROA1_DROME Heterogeneous nuclear ribonucleoprotein A1 ...    99   2e-20
sp|Q9JJ54|HNRPD_RAT Heterogeneous nuclear ribonucleoprotein D0 O...    99   2e-20
sp|Q6NU14|HNDLB_XENLA Heterogeneous nuclear ribonucleoprotein D-...    99   2e-20
sp|P48810|RB87F_DROME Heterogeneous nuclear ribonucleoprotein 87...    98   2e-20
sp|Q60668|HNRPD_MOUSE Heterogeneous nuclear ribonucleoprotein D0...    98   2e-20
sp|Q14103|HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0...    98   2e-20
sp|A7VJC2|ROA2_RAT Heterogeneous nuclear ribonucleoproteins A2/B...    97   7e-20
sp|Q5RBU8|ROA2_PONAB Heterogeneous nuclear ribonucleoproteins A2...    97   7e-20
sp|O88569|ROA2_MOUSE Heterogeneous nuclear ribonucleoproteins A2...    97   7e-20
sp|P22626|ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2...    97   7e-20
sp|Q2HJ60|ROA2_BOVIN Heterogeneous nuclear ribonucleoproteins A2...    97   7e-20

>sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15
           OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1
          Length = 474

 Score =  119 bits (298), Expect = 9e-27
 Identities = 50/126 (39%), Positives = 85/126 (67%)
 Frame = +2

Query: 167 DQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRV 346
           +  K+F+GG++WET+++ L+DYF  FG V++  +++D TTGR+RGFGF+ F +   V+ V
Sbjct: 161 EDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEV 220

Query: 347 TLEKHSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVGGLASTVTEEDFK 526
             ++H +DG++++ KRA+PR+EQ+                +T K+FVGG+    TEE+F+
Sbjct: 221 MSKEHHLDGKIIDPKRAIPREEQE----------------KTAKMFVGGVPGDCTEEEFR 264

Query: 527 TYFSQF 544
            +F+QF
Sbjct: 265 NFFNQF 270



 Score = 73.6 bits (179), Expect = 6e-13
 Identities = 32/79 (40%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
 Frame = +2

Query: 173 AKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRVTL 352
           AK+FVGG+  + +EE+ +++F+ FG V++  ++ D+ TGR RGFGFV + + ++V+    
Sbjct: 247 AKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMS 306

Query: 353 EKH-SIDGRMVEVKRAVPR 406
           + + +I G+ VEVKRA P+
Sbjct: 307 QPYITIHGKPVEVKRATPK 325


>sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4
           OS=Saccharomyces cerevisiae GN=HRP1 PE=1 SV=1
          Length = 534

 Score =  114 bits (286), Expect = 2e-25
 Identities = 51/129 (39%), Positives = 83/129 (64%)
 Frame = +2

Query: 158 MDSDQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASV 337
           +  +  K+F+GG++W+T+E+ L++YF  +G V +  I+KD  TGR+RGFGF++F   +SV
Sbjct: 154 LSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSV 213

Query: 338 DRVTLEKHSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVGGLASTVTEE 517
           D V   +H +DG++++ KRA+PRDEQ                 +T KIFVGG+   V  +
Sbjct: 214 DEVVKTQHILDGKVIDPKRAIPRDEQD----------------KTGKIFVGGIGPDVRPK 257

Query: 518 DFKTYFSQF 544
           +F+ +FSQ+
Sbjct: 258 EFEEFFSQW 266



 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 39/98 (39%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRVTLE 355
           KIFVGGI  +   ++ +++FS +G +++  ++ D+ TG++RGFGFV +  + +VDRV   
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303

Query: 356 KH-SIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSG 466
           K      R +E+KRA PR  QQ   +SSN     GN+G
Sbjct: 304 KFIDFKDRKIEIKRAEPRHMQQ---KSSNN---GGNNG 335



 Score = 29.6 bits (65), Expect = 9.9
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +2

Query: 413 QQNLPRSSNAISVSGNSGRTTKIFVGGLASTVTEEDFKTYFSQF 544
           QQ + ++    S +  S  + K+F+GGL    TE++ + YF ++
Sbjct: 139 QQQVTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKY 182


>sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=Mus
           musculus GN=Msi2 PE=1 SV=1
          Length = 346

 Score =  112 bits (280), Expect = 1e-24
 Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 1/127 (0%)
 Frame = +2

Query: 167 DQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRV 346
           D  K+F+GG+SW+TS + L+DYFS FG + E ++++D TT R+RGFGFV F+D ASVD+V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 347 TLE-KHSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVGGLASTVTEEDF 523
             +  H +D + ++ K A PR  Q  +              RT KIFVGGL++    ED 
Sbjct: 79  LGQPHHELDSKTIDPKVAFPRRAQPKMVT------------RTKKIFVGGLSANTVVEDV 126

Query: 524 KTYFSQF 544
           K YF QF
Sbjct: 127 KQYFEQF 133



 Score = 73.2 bits (178), Expect = 8e-13
 Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRV-TL 352
           KIFVGG+S  T  E +K YF  FG V + +++ D+TT R RGFGFV F +   V++V  +
Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEI 170

Query: 353 EKHSIDGRMVEVKRAVPRD 409
             H I+ +MVE K+A P++
Sbjct: 171 HFHEINNKMVECKKAQPKE 189


>sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=Homo
           sapiens GN=MSI2 PE=1 SV=1
          Length = 328

 Score =  112 bits (280), Expect = 1e-24
 Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 1/127 (0%)
 Frame = +2

Query: 167 DQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRV 346
           D  K+F+GG+SW+TS + L+DYFS FG + E ++++D TT R+RGFGFV F+D ASVD+V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 347 TLE-KHSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVGGLASTVTEEDF 523
             +  H +D + ++ K A PR  Q  +              RT KIFVGGL++    ED 
Sbjct: 79  LGQPHHELDSKTIDPKVAFPRRAQPKMVT------------RTKKIFVGGLSANTVVEDV 126

Query: 524 KTYFSQF 544
           K YF QF
Sbjct: 127 KQYFEQF 133



 Score = 73.2 bits (178), Expect = 8e-13
 Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRV-TL 352
           KIFVGG+S  T  E +K YF  FG V + +++ D+TT R RGFGFV F +   V++V  +
Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEI 170

Query: 353 EKHSIDGRMVEVKRAVPRD 409
             H I+ +MVE K+A P++
Sbjct: 171 HFHEINNKMVECKKAQPKE 189


>sp|O43347|MSI1H_HUMAN RNA-binding protein Musashi homolog 1 OS=Homo
           sapiens GN=MSI1 PE=1 SV=1
          Length = 362

 Score =  109 bits (272), Expect = 1e-23
 Identities = 55/127 (43%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
 Frame = +2

Query: 167 DQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRV 346
           D  K+F+GG+SW+T++E L++YF  FG V E ++++D  T R+RGFGFV F D A VD+V
Sbjct: 18  DPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKV 77

Query: 347 TLE-KHSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVGGLASTVTEEDF 523
             + +H +D + ++ K A PR  Q  +              RT KIFVGGL+   T ED 
Sbjct: 78  LAQSRHELDSKTIDPKVAFPRRAQPKMVT------------RTKKIFVGGLSVNTTVEDV 125

Query: 524 KTYFSQF 544
           K YF QF
Sbjct: 126 KQYFEQF 132



 Score = 73.6 bits (179), Expect = 6e-13
 Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRV-TL 352
           KIFVGG+S  T+ E +K YF  FG V + +++ D+TT R RGFGFV F     V++V  +
Sbjct: 110 KIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI 169

Query: 353 EKHSIDGRMVEVKRAVPRD 409
             H I+ +MVE K+A P++
Sbjct: 170 HFHEINNKMVECKKAQPKE 188


>sp|Q8K3P4|MSI1H_RAT RNA-binding protein Musashi homolog 1 OS=Rattus
           norvegicus GN=Msi1 PE=2 SV=1
          Length = 362

 Score =  108 bits (271), Expect = 1e-23
 Identities = 55/127 (43%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
 Frame = +2

Query: 167 DQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRV 346
           D  K+F+GG+SW+T++E L++YF  FG V E ++++D  T R+RGFGFV F D A VD+V
Sbjct: 18  DPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKV 77

Query: 347 TLE-KHSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVGGLASTVTEEDF 523
             + +H +D + ++ K A PR  Q  +              RT KIFVGGL+   T ED 
Sbjct: 78  LAQSRHELDSKTIDPKVAFPRRAQPKMVT------------RTKKIFVGGLSVNTTVEDV 125

Query: 524 KTYFSQF 544
           K YF QF
Sbjct: 126 KHYFEQF 132



 Score = 73.2 bits (178), Expect = 8e-13
 Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRV-TL 352
           KIFVGG+S  T+ E +K YF  FG V + +++ D+TT R RGFGFV F     V++V  +
Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI 169

Query: 353 EKHSIDGRMVEVKRAVPRD 409
             H I+ +MVE K+A P++
Sbjct: 170 HFHEINNKMVECKKAQPKE 188


>sp|Q61474|MSI1H_MOUSE RNA-binding protein Musashi homolog 1 OS=Mus
           musculus GN=Msi1 PE=1 SV=1
          Length = 362

 Score =  108 bits (271), Expect = 1e-23
 Identities = 55/127 (43%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
 Frame = +2

Query: 167 DQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRV 346
           D  K+F+GG+SW+T++E L++YF  FG V E ++++D  T R+RGFGFV F D A VD+V
Sbjct: 18  DPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKV 77

Query: 347 TLE-KHSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVGGLASTVTEEDF 523
             + +H +D + ++ K A PR  Q  +              RT KIFVGGL+   T ED 
Sbjct: 78  LAQSRHELDSKTIDPKVAFPRRAQPKMVT------------RTKKIFVGGLSVNTTVEDV 125

Query: 524 KTYFSQF 544
           K YF QF
Sbjct: 126 KHYFEQF 132



 Score = 73.2 bits (178), Expect = 8e-13
 Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRV-TL 352
           KIFVGG+S  T+ E +K YF  FG V + +++ D+TT R RGFGFV F     V++V  +
Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI 169

Query: 353 EKHSIDGRMVEVKRAVPRD 409
             H I+ +MVE K+A P++
Sbjct: 170 HFHEINNKMVECKKAQPKE 188


>sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B
           OS=Mus musculus GN=Hnrnpab PE=1 SV=1
          Length = 285

 Score =  108 bits (270), Expect = 2e-23
 Identities = 56/129 (43%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
 Frame = +2

Query: 161 DSDQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVD 340
           + D  K+FVGG+SW+TS++ LKDYF+ FG VV+  I  D  TGR+RGFGF+ F DS+SV+
Sbjct: 71  EEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVE 130

Query: 341 RVTLEK-HSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVGGLASTVTEE 517
           +V  +K H +DGR+++ K+A+   +                     KIFVGGL    TEE
Sbjct: 131 KVLDQKEHRLDGRVIDPKKAMAMKKDP-----------------VKKIFVGGLNPEATEE 173

Query: 518 DFKTYFSQF 544
             + YF QF
Sbjct: 174 KIREYFGQF 182



 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRVTLE 355
           KIFVGG++ E +EEK+++YF  FG +    +  D    + RGF F+ F +   V +V  +
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEK 219

Query: 356 K-HSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVGGLAST 505
           K H++ G   E+K A P++  Q     S      GN  R  +   GG  ST
Sbjct: 220 KFHTVSGSKCEIKVAQPKEVYQQQQYGSGG---RGNRNRGNRGSGGGQGST 267



 Score = 31.6 bits (70), Expect = 2.6
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +2

Query: 443 ISVSGNSGRTTKIFVGGLASTVTEEDFKTYFSQF 544
           I+ S N     K+FVGGL+   +++D K YF++F
Sbjct: 65  INASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKF 98


>sp|P48809|RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C
           OS=Drosophila melanogaster GN=Hrb27C PE=1 SV=2
          Length = 421

 Score =  105 bits (261), Expect = 2e-22
 Identities = 50/129 (38%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
 Frame = +2

Query: 161 DSDQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVD 340
           + ++ K+FVGG+SWET++E L  YF  FG++++ V++K+  +GR+RGFGFV F+D  +V+
Sbjct: 3   EDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVN 62

Query: 341 RVTLE-KHSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVGGLASTVTEE 517
            V     H++DGR ++ K   PR  Q+               G   K+F+GGL S VTE 
Sbjct: 63  HVLQNGPHTLDGRTIDPKPCNPRTLQK------------PKKGGGYKVFLGGLPSNVTET 110

Query: 518 DFKTYFSQF 544
           D +T+F+++
Sbjct: 111 DLRTFFNRY 119



 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 37/99 (37%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRVTLE 355
           K+F+GG+    +E  L+ +F+ +G V E VI+ D+   ++RGFGF++F + +SV+ VT E
Sbjct: 97  KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156

Query: 356 KH-SIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGR 469
           ++ +++G+ VE+K+A PRD      ++SN  +V G  G+
Sbjct: 157 RYINLNGKQVEIKKAEPRDGSGG--QNSNNSTVGGAYGK 193


>sp|Q99729|ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B
           OS=Homo sapiens GN=HNRNPAB PE=1 SV=2
          Length = 332

 Score =  103 bits (257), Expect = 5e-22
 Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 2/130 (1%)
 Frame = +2

Query: 161 DSDQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVD 340
           + D  K+FVGG+SW+TS++ LKDYF+ FG VV+  I  D  TGR+RGFGF+ F D+ASV+
Sbjct: 65  EEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVE 124

Query: 341 RVTLEK-HSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVGGL-ASTVTE 514
           +V  +K H +DGR+++ K+A+   +                     KIFVGGL   + TE
Sbjct: 125 KVLDQKEHRLDGRVIDPKKAMAMKKDP-----------------VKKIFVGGLNPESPTE 167

Query: 515 EDFKTYFSQF 544
           E  + YF +F
Sbjct: 168 EKIREYFGEF 177



 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
 Frame = +2

Query: 176 KIFVGGISWET-SEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRVTL 352
           KIFVGG++ E+ +EEK+++YF  FG +    +  D    + RGF F+ F +   V +V  
Sbjct: 154 KIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213

Query: 353 EK-HSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVGG 493
           +K H++ G   E+K A P++  Q     S      GN  R  +   GG
Sbjct: 214 KKFHTVSGSKCEIKVAQPKEVYQQQQYGSGG---RGNRNRGNRGSGGG 258



 Score = 32.7 bits (73), Expect = 1.2
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +2

Query: 395 AVPRDEQQNLPRSSNAISVSGNSGRTTKIFVGGLASTVTEEDFKTYFSQF 544
           A P    QN     + I+ S N     K+FVGGL+   +++D K YF++F
Sbjct: 44  AAPPSGNQN-GAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKF 92
tr_hit_id Q9SFD3
Definition tr|Q9SFD3|Q9SFD3_ARATH Putative RNA-binding protein OS=Arabidopsis thaliana
Align length 132
Score (bit) 173.0
E-value 5.0e-42
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955666|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_L11, 5'
         (546 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9SFD3|Q9SFD3_ARATH Putative RNA-binding protein OS=Arabidops...   173   5e-42
tr|Q94A00|Q94A00_ARATH Putative RNA-binding protein OS=Arabidops...   173   5e-42
tr|Q8W555|Q8W555_ARATH AT3g07810/F17A17_15 (Putative RNA-binding...   173   5e-42
tr|A7R1X0|A7R1X0_VITVI Chromosome undetermined scaffold_383, who...   173   5e-42
tr|A5C205|A5C205_VITVI Putative uncharacterized protein OS=Vitis...   173   6e-42
tr|A9NVN2|A9NVN2_PICSI Putative uncharacterized protein OS=Picea...   171   3e-41
tr|Q9FJ56|Q9FJ56_ARATH RNA-binding protein-like OS=Arabidopsis t...   170   4e-41
tr|Q949Z3|Q949Z3_ARATH Putative RNA-binding protein OS=Arabidops...   170   4e-41
tr|Q8L779|Q8L779_ARATH RNA-binding protein-like OS=Arabidopsis t...   170   4e-41
tr|Q2R0P4|Q2R0P4_ORYSJ Os11g0637700 protein OS=Oryza sativa subs...   167   3e-40
tr|A7P0F4|A7P0F4_VITVI Chromosome chr19 scaffold_4, whole genome...   166   6e-40
tr|Q1ENZ5|Q1ENZ5_MUSAC RNA-binding protein, putative OS=Musa acu...   166   7e-40
tr|B8LME7|B8LME7_PICSI Putative uncharacterized protein OS=Picea...   166   1e-39
tr|A7Q348|A7Q348_VITVI Chromosome chr12 scaffold_47, whole genom...   166   1e-39
tr|Q84ZR9|Q84ZR9_ORYSJ Os07g0584500 protein OS=Oryza sativa subs...   165   1e-39
tr|B8A134|B8A134_MAIZE Putative uncharacterized protein OS=Zea m...   164   2e-39
tr|B8B7U2|B8B7U2_ORYSI Putative uncharacterized protein OS=Oryza...   164   4e-39
tr|B6TAS3|B6TAS3_MAIZE RNA-binding protein OS=Zea mays PE=2 SV=1      159   7e-38
tr|B4FK28|B4FK28_MAIZE Putative uncharacterized protein OS=Zea m...   159   7e-38
tr|A3CD54|A3CD54_ORYSJ Putative uncharacterized protein OS=Oryza...   157   3e-37
tr|Q9SU99|Q9SU99_ARATH HnRNP-like protein OS=Arabidopsis thalian...   157   5e-37
tr|Q8W569|Q8W569_ARATH AT4g26650/T15N24_100 OS=Arabidopsis thali...   157   5e-37
tr|Q9FGJ5|Q9FGJ5_ARATH RNA-binding protein-like OS=Arabidopsis t...   155   1e-36
tr|Q8VZ63|Q8VZ63_ARATH Putative RNA-binding protein OS=Arabidops...   155   1e-36
tr|Q8LDS6|Q8LDS6_ARATH RNA-binding protein-like OS=Arabidopsis t...   155   1e-36
tr|A7NXG9|A7NXG9_VITVI Chromosome chr5 scaffold_2, whole genome ...   153   5e-36
tr|A5BK88|A5BK88_VITVI Putative uncharacterized protein OS=Vitis...   153   5e-36
tr|Q2A9U7|Q2A9U7_BRAOL RNA recognition motif. (A.k.a. RRM, RBD, ...   152   1e-35
tr|A7Q1N3|A7Q1N3_VITVI Chromosome chr7 scaffold_44, whole genome...   151   2e-35
tr|Q2A9Q2|Q2A9Q2_BRAOL RNA recognition motif. (A.k.a. RRM, RBD, ...   150   4e-35

>tr|Q9SFD3|Q9SFD3_ARATH Putative RNA-binding protein OS=Arabidopsis
           thaliana GN=F17A17.15 PE=4 SV=1
          Length = 492

 Score =  173 bits (439), Expect = 5e-42
 Identities = 85/132 (64%), Positives = 105/132 (79%), Gaps = 3/132 (2%)
 Frame = +2

Query: 158 MDSDQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASV 337
           M SD  K+F+GGISW+T+EE+LK+YFS+FG V+E VI+KDRTTGRARGFGFV F+D A  
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 338 DRVTLEKHSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGN---SGRTTKIFVGGLASTV 508
           + V  EKH+IDGR+VE K+AVPRD+ QN+   SN+ S+ G+    GRT KIFVGGL S+V
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDD-QNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSV 119

Query: 509 TEEDFKTYFSQF 544
           TE DFKTYF QF
Sbjct: 120 TESDFKTYFEQF 131



 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRVTLE 355
           KIFVGG+    +E   K YF  FG   + V++ D  T R RGFGF+ +    +V++V L+
Sbjct: 109 KIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLK 168

Query: 356 K-HSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVG 490
             H ++G+MVEVKRAVP++      RS      S    R   +  G
Sbjct: 169 TFHELNGKMVEVKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNG 214


>tr|Q94A00|Q94A00_ARATH Putative RNA-binding protein OS=Arabidopsis
           thaliana GN=At3g07810 PE=2 SV=1
          Length = 494

 Score =  173 bits (439), Expect = 5e-42
 Identities = 85/132 (64%), Positives = 105/132 (79%), Gaps = 3/132 (2%)
 Frame = +2

Query: 158 MDSDQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASV 337
           M SD  K+F+GGISW+T+EE+LK+YFS+FG V+E VI+KDRTTGRARGFGFV F+D A  
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 338 DRVTLEKHSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGN---SGRTTKIFVGGLASTV 508
           + V  EKH+IDGR+VE K+AVPRD+ QN+   SN+ S+ G+    GRT KIFVGGL S+V
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDD-QNMVNRSNSSSIQGSPSGPGRTRKIFVGGLPSSV 119

Query: 509 TEEDFKTYFSQF 544
           TE DFKTYF QF
Sbjct: 120 TESDFKTYFEQF 131



 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRVTLE 355
           KIFVGG+    +E   K YF  FG   + V++ D  T R RGFGF+ +    +V++V L+
Sbjct: 109 KIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLK 168

Query: 356 K-HSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVG 490
             H ++G+MVEVKRAVP++      RS      S    R   +  G
Sbjct: 169 TFHELNGKMVEVKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNG 214


>tr|Q8W555|Q8W555_ARATH AT3g07810/F17A17_15 (Putative RNA-binding
           protein) OS=Arabidopsis thaliana GN=At3g07810 PE=2 SV=1
          Length = 494

 Score =  173 bits (439), Expect = 5e-42
 Identities = 85/132 (64%), Positives = 105/132 (79%), Gaps = 3/132 (2%)
 Frame = +2

Query: 158 MDSDQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASV 337
           M SD  K+F+GGISW+T+EE+LK+YFS+FG V+E VI+KDRTTGRARGFGFV F+D A  
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 338 DRVTLEKHSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGN---SGRTTKIFVGGLASTV 508
           + V  EKH+IDGR+VE K+AVPRD+ QN+   SN+ S+ G+    GRT KIFVGGL S+V
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDD-QNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSV 119

Query: 509 TEEDFKTYFSQF 544
           TE DFKTYF QF
Sbjct: 120 TESDFKTYFEQF 131



 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRVTLE 355
           KIFVGG+    +E   K YF  FG   + V++ D  T R RGFGF+ +    +V++V L+
Sbjct: 109 KIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLK 168

Query: 356 K-HSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVG 490
             H ++G+MVEVKRAVP++      RS      S    R   +  G
Sbjct: 169 TFHELNGKMVEVKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNG 214


>tr|A7R1X0|A7R1X0_VITVI Chromosome undetermined scaffold_383, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00012474001 PE=4 SV=1
          Length = 461

 Score =  173 bits (439), Expect = 5e-42
 Identities = 83/129 (64%), Positives = 102/129 (79%)
 Frame = +2

Query: 158 MDSDQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASV 337
           M+ +  K+F+GGISW+T+EE+L++YF  FG VVE VI+KDRTTGRARGFGFV F+D A  
Sbjct: 1   MEMELGKLFIGGISWDTNEERLREYFQTFGEVVEAVIMKDRTTGRARGFGFVVFADPAVA 60

Query: 338 DRVTLEKHSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVGGLASTVTEE 517
           +RV +EKH IDGR VE K+AVPRD+Q  L RS+++I  S    RT KIFVGGLASTVTE 
Sbjct: 61  ERVVMEKHMIDGRTVEAKKAVPRDDQNILNRSNSSIHGSPGPARTKKIFVGGLASTVTES 120

Query: 518 DFKTYFSQF 544
           DFK YF+QF
Sbjct: 121 DFKKYFNQF 129



 Score = 80.9 bits (198), Expect = 4e-14
 Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRVTLE 355
           KIFVGG++   +E   K YF+ FG + + V++ D  T R RGFGF+ +    +VD+V L+
Sbjct: 107 KIFVGGLASTVTESDFKKYFNQFGTITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLK 166

Query: 356 K-HSIDGRMVEVKRAVPRDEQQNLPRS 433
             H ++G+MVEVKRAVP++      R+
Sbjct: 167 TFHELNGKMVEVKRAVPKESSPGPSRN 193


>tr|A5C205|A5C205_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_003519 PE=4 SV=1
          Length = 482

 Score =  173 bits (438), Expect = 6e-42
 Identities = 82/129 (63%), Positives = 101/129 (78%)
 Frame = +2

Query: 158 MDSDQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASV 337
           M+SD  K+F+GGISW+T E++LK+YF  +G VVE VI++DRTTGRARGFGFV F+D A  
Sbjct: 1   MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60

Query: 338 DRVTLEKHSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVGGLASTVTEE 517
           +RV ++KH IDGR VE K+AVPRD+Q  L R++ +I  S   GRT KIFVGGLASTVTE 
Sbjct: 61  ERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTES 120

Query: 518 DFKTYFSQF 544
           DFK YF QF
Sbjct: 121 DFKKYFDQF 129



 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRVTLE 355
           KIFVGG++   +E   K YF  FG + + V++ D  T R RGFGF+ +    +V+RV L 
Sbjct: 107 KIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERV-LH 165

Query: 356 K--HSIDGRMVEVKRAVPRDEQQNLPRS 433
           K  H ++G+MVEVKRAVP++      RS
Sbjct: 166 KTFHELNGKMVEVKRAVPKEHSPGPSRS 193


>tr|A9NVN2|A9NVN2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 476

 Score =  171 bits (432), Expect = 3e-41
 Identities = 86/133 (64%), Positives = 100/133 (75%), Gaps = 4/133 (3%)
 Frame = +2

Query: 158 MDSDQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASV 337
           MDSD  KIF+GGISWETSEE+L+DYFS +G VV+TVI+KDR TGRARGFGFV FSD + V
Sbjct: 1   MDSDHCKIFIGGISWETSEERLRDYFSKYGEVVQTVIMKDRLTGRARGFGFVVFSDPSIV 60

Query: 338 DRVTLEKHSIDGRMVEVKRAVPRDEQQNLPRSS----NAISVSGNSGRTTKIFVGGLAST 505
           D    EKH+IDGR VE K+AVPR EQQN   +S    ++    G S RT KIFVGGL + 
Sbjct: 61  DIALQEKHTIDGRAVEAKKAVPRSEQQNTRTNSYNNNDSQGYGGGSVRTKKIFVGGLPAN 120

Query: 506 VTEEDFKTYFSQF 544
           +TEEDFK YF QF
Sbjct: 121 LTEEDFKNYFQQF 133



 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 37/80 (46%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRVTLE 355
           KIFVGG+    +EE  K+YF  FGN+ + V++ D  T R RGFGF++F    +V+ V L+
Sbjct: 111 KIFVGGLPANLTEEDFKNYFQQFGNITDVVVMYDHNTQRPRGFGFISFDSEDAVESV-LQ 169

Query: 356 K--HSIDGRMVEVKRAVPRD 409
           K  H ++ ++VEVKRA+P+D
Sbjct: 170 KSFHQLNEKLVEVKRALPKD 189


>tr|Q9FJ56|Q9FJ56_ARATH RNA-binding protein-like OS=Arabidopsis
           thaliana PE=4 SV=1
          Length = 473

 Score =  170 bits (431), Expect = 4e-41
 Identities = 81/133 (60%), Positives = 103/133 (77%), Gaps = 4/133 (3%)
 Frame = +2

Query: 158 MDSDQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASV 337
           M+SD  K+F+GGISW+T EE+L+DYFSN+G+VVE VI++DR TGRARGFGF+ F+D    
Sbjct: 1   MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60

Query: 338 DRVTLEKHSIDGRMVEVKRAVPRDEQQNLPRSSNAI----SVSGNSGRTTKIFVGGLAST 505
           +RV ++KH IDGR VE K+AVPRD+QQ L R ++ I     V G  GRT KIFVGGL S+
Sbjct: 61  ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSS 120

Query: 506 VTEEDFKTYFSQF 544
           +TEE+FK YF QF
Sbjct: 121 ITEEEFKNYFDQF 133



 Score = 80.9 bits (198), Expect = 4e-14
 Identities = 39/80 (48%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRVTLE 355
           KIFVGG+    +EE+ K+YF  FG + + V++ D  T R RGFGF+ F    +VDRV L 
Sbjct: 111 KIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRV-LH 169

Query: 356 K--HSIDGRMVEVKRAVPRD 409
           K  H ++G++VEVKRAVP++
Sbjct: 170 KTFHELNGKLVEVKRAVPKE 189


>tr|Q949Z3|Q949Z3_ARATH Putative RNA-binding protein OS=Arabidopsis
           thaliana GN=AT5g55550 PE=2 SV=1
          Length = 460

 Score =  170 bits (431), Expect = 4e-41
 Identities = 81/133 (60%), Positives = 103/133 (77%), Gaps = 4/133 (3%)
 Frame = +2

Query: 158 MDSDQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASV 337
           M+SD  K+F+GGISW+T EE+L+DYFSN+G+VVE VI++DR TGRARGFGF+ F+D    
Sbjct: 1   MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60

Query: 338 DRVTLEKHSIDGRMVEVKRAVPRDEQQNLPRSSNAI----SVSGNSGRTTKIFVGGLAST 505
           +RV ++KH IDGR VE K+AVPRD+QQ L R ++ I     V G  GRT KIFVGGL S+
Sbjct: 61  ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSS 120

Query: 506 VTEEDFKTYFSQF 544
           +TEE+FK YF QF
Sbjct: 121 ITEEEFKNYFDQF 133



 Score = 80.9 bits (198), Expect = 4e-14
 Identities = 39/80 (48%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRVTLE 355
           KIFVGG+    +EE+ K+YF  FG + + V++ D  T R RGFGF+ F    +VDRV L 
Sbjct: 111 KIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRV-LH 169

Query: 356 K--HSIDGRMVEVKRAVPRD 409
           K  H ++G++VEVKRAVP++
Sbjct: 170 KTFHELNGKLVEVKRAVPKE 189


>tr|Q8L779|Q8L779_ARATH RNA-binding protein-like OS=Arabidopsis
           thaliana GN=At5g55550 PE=2 SV=1
          Length = 448

 Score =  170 bits (431), Expect = 4e-41
 Identities = 81/133 (60%), Positives = 103/133 (77%), Gaps = 4/133 (3%)
 Frame = +2

Query: 158 MDSDQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASV 337
           M+SD  K+F+GGISW+T EE+L+DYFSN+G+VVE VI++DR TGRARGFGF+ F+D    
Sbjct: 1   MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60

Query: 338 DRVTLEKHSIDGRMVEVKRAVPRDEQQNLPRSSNAI----SVSGNSGRTTKIFVGGLAST 505
           +RV ++KH IDGR VE K+AVPRD+QQ L R ++ I     V G  GRT KIFVGGL S+
Sbjct: 61  ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSS 120

Query: 506 VTEEDFKTYFSQF 544
           +TEE+FK YF QF
Sbjct: 121 ITEEEFKNYFDQF 133



 Score = 80.9 bits (198), Expect = 4e-14
 Identities = 39/80 (48%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRVTLE 355
           KIFVGG+    +EE+ K+YF  FG + + V++ D  T R RGFGF+ F    +VDRV L 
Sbjct: 111 KIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRV-LH 169

Query: 356 K--HSIDGRMVEVKRAVPRD 409
           K  H ++G++VEVKRAVP++
Sbjct: 170 KTFHELNGKLVEVKRAVPKE 189


>tr|Q2R0P4|Q2R0P4_ORYSJ Os11g0637700 protein OS=Oryza sativa subsp.
           japonica GN=Os11g0637700 PE=2 SV=2
          Length = 467

 Score =  167 bits (423), Expect = 3e-40
 Identities = 77/129 (59%), Positives = 99/129 (76%)
 Frame = +2

Query: 158 MDSDQAKIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASV 337
           M++D  K+F+GGISW+T+E++L++YF  +G VVE VI++DR TGRARGFGF+ F+D A  
Sbjct: 1   MEADAGKLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVA 60

Query: 338 DRVTLEKHSIDGRMVEVKRAVPRDEQQNLPRSSNAISVSGNSGRTTKIFVGGLASTVTEE 517
           +RV +EKH IDGRMVE K+AVPRD+Q  L +S  +   S    RT KIFVGGLASTVTE 
Sbjct: 61  ERVIMEKHMIDGRMVEAKKAVPRDDQHALSKSGGSAHGSPGPSRTKKIFVGGLASTVTEA 120

Query: 518 DFKTYFSQF 544
           DF+ YF QF
Sbjct: 121 DFRKYFEQF 129



 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
 Frame = +2

Query: 176 KIFVGGISWETSEEKLKDYFSNFGNVVETVIVKDRTTGRARGFGFVAFSDSASVDRVTLE 355
           KIFVGG++   +E   + YF  FG + + V++ D  T R RGFGF+ +    +VD+   +
Sbjct: 107 KIFVGGLASTVTEADFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 166

Query: 356 K-HSIDGRMVEVKRAVPRD 409
             H ++G+MVEVKRAVP++
Sbjct: 167 TFHELNGKMVEVKRAVPKE 185