DK955674 |
Clone id |
TST39A01NGRL0023_L19 |
Library |
TST39 |
Length |
576 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_L19. 5' end sequence. |
Accession |
DK955674 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL690Contig1 |
Sequence |
ATCACACGCACACACACCTCCTTTTCATGGCCACTACCAACAACGCAGAGGATGCTGCTG CGCCCCTTGCAGACTCCAAGGGTGTGGTGCCATTGACTACATGGGTTCTCATCTCCAATT TCAAAGTTGCTTACCACTTACTCAGAAGGCCAGATGGGTCATTCAACCGACACCTCGCTG AATTCCTCGACCGCAAAGCTCCTGCGAATGCGATGCCTTCTGATGGCGCCGCTAGCAAAG ATATAATCATTGACAGGGCAATTGGTCTCTGGGGAAGGCTTTTCTGGGCATCAGATGCAT ATGCAGACCCCCGTGTGTCATTAAGAAAGCAACCGCTGCTAGTCTACTTCCATGGAGGAA GCTTTGTGCATTCATCGGCGAATAGCTCGATATATGATGCGATGTGCAGGAGGATTGCAA AGATGTGCGGCGTGGTGGTATTTTCGGTGAATTTTCGGAGGGCACCGGAGCATAGGTGTC CGGCGGCATATGAGGATGGGGCAACATGCATAAGGTGGGCAAAGAGGTTTCTTTGGGAGG CAATGTCTTGCACAAGTGGGGATGTGATCCAAAGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q940G6 |
Definition |
sp|Q940G6|GI1L3_ARATH Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana |
Align length |
164 |
Score (bit) |
195.0 |
E-value |
2.0e-49 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P286 |
Definition |
tr|A9P286|A9P286_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
149 |
Score (bit) |
192.0 |
E-value |
1.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955674|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_L19, 5' (576 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P286|A9P286_PICSI Putative uncharacterized protein OS=Picea... 192 1e-47 tr|B0S4S2|B0S4S2_PINTA Putative GID1-like gibberellin receptor O... 189 9e-47 tr|B0S4S1|B0S4S1_PICGL Putative GID1-like gibberellin receptor O... 188 2e-46 tr|A9LY07|A9LY07_9TRAC Putative gibberellin receptor OS=Selagine... 187 3e-46 tr|B0S4T0|B0S4T0_9MAGN Putative GID1-like gibberellin receptor O... 185 1e-45 tr|A5BRG2|A5BRG2_VITVI Putative uncharacterized protein (Chromos... 182 9e-45 tr|B0S4S3|B0S4S3_MEDTR Putative GID1-like gibberellin receptor O... 179 7e-44 tr|A7PU21|A7PU21_VITVI Chromosome chr7 scaffold_31, whole genome... 177 5e-43 tr|A7U4T3|A7U4T3_9TRAC Putative gibberellin receptor OS=Selagine... 176 8e-43 tr|Q0PIN1|Q0PIN1_GOSHI Gibberellic acid receptor OS=Gossypium hi... 176 1e-42 tr|A5Z1M8|A5Z1M8_GOSHI Gibberellic acid receptor-b OS=Gossypium ... 174 3e-42 tr|B0S4S4|B0S4S4_MEDTR Putative GID1-like gibberellin receptor O... 174 4e-42 tr|Q0ZPU9|Q0ZPU9_ACTDE CXE carboxylesterase OS=Actinidia delicio... 170 4e-41 tr|B0S4S9|B0S4S9_SOLLC Putative GID1-like gibberellin receptor O... 169 1e-40 tr|B8AY84|B8AY84_ORYSI Putative uncharacterized protein OS=Oryza... 166 8e-40 tr|A7MAQ4|A7MAQ4_HORVU GID1-like gibberellin receptor OS=Hordeum... 166 8e-40 tr|Q0DI89|Q0DI89_ORYSJ Os05g0407500 protein OS=Oryza sativa subs... 165 2e-39 tr|B8QAJ2|B8QAJ2_WHEAT Putative GA receptor GID1 (Fragment) OS=T... 162 2e-38 tr|A9LY08|A9LY08_9TRAC Putative gibberellin receptor OS=Selagine... 161 2e-38 tr|B0S4T3|B0S4T3_WHEAT Putative GID1-like gibberellin receptor O... 160 5e-38 tr|B0S4T1|B0S4T1_ALLCE Putative GID1-like gibberellin receptor (... 159 1e-37 tr|B0S4S8|B0S4S8_SORBI Putative GID1-like gibberellin receptor O... 157 3e-37 tr|B0S4S5|B0S4S5_SACOF Putative GID1-like gibberellin receptor O... 155 1e-36 tr|B0S4S6|B0S4S6_MAIZE Putative GID1-like gibberellin receptor O... 154 3e-36 tr|B0S4S7|B0S4S7_MAIZE Putative GID1-like gibberellin receptor O... 152 1e-35 tr|Q53M20|Q53M20_ORYSJ PrMC3, putative, expressed OS=Oryza sativ... 119 9e-26 tr|Q0ITM1|Q0ITM1_ORYSJ Os11g0240600 protein (Fragment) OS=Oryza ... 119 9e-26 tr|B6TXN5|B6TXN5_MAIZE Gibberellin receptor GID1L2 OS=Zea mays P... 119 9e-26 tr|A7QR11|A7QR11_VITVI Chromosome undetermined scaffold_147, who... 119 9e-26 tr|A7QR12|A7QR12_VITVI Chromosome undetermined scaffold_147, who... 118 2e-25
>tr|A9P286|A9P286_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 352
Score = 192 bits (487), Expect = 1e-47 Identities = 87/149 (58%), Positives = 113/149 (75%) Frame = +3
Query: 72 DSKGVVPLTTWVLISNFKVAYHLLRRPDGSFNRHLAEFLDRKAPANAMPSDGAASKDIII 251 ++K VVPL T+VLISNFK+ Y+LLRRPDG+FNRHLAEFL+RKAPANA P G S D+++ Sbjct: 11 EAKMVVPLNTFVLISNFKLVYNLLRRPDGTFNRHLAEFLERKAPANATPVSGVFSLDVVM 70
Query: 252 DRAIGLWGRLFWASDAYADPRVSLRKQPLLVYFHGGSFVHSSANSSIYDAMCRRIAKMCG 431 DR GLW R++ A +D ++ P++++FHGGSFVHSSANS+IYD +CR ++ C Sbjct: 71 DRDSGLWSRIYTPIAATSDSTANVAGLPVIIFFHGGSFVHSSANSAIYDVLCRHLSSFCS 130
Query: 432 VVVFSVNFRRAPEHRCPAAYEDGATCIRW 518 +V SVN+RRAPEH PA YEDG +RW Sbjct: 131 AIVISVNYRRAPEHIYPAPYEDGWAALRW 159
>tr|B0S4S2|B0S4S2_PINTA Putative GID1-like gibberellin receptor OS=Pinus taeda GN=GID1 PE=2 SV=1 Length = 357
Score = 189 bits (480), Expect = 9e-47 Identities = 87/149 (58%), Positives = 110/149 (73%) Frame = +3
Query: 72 DSKGVVPLTTWVLISNFKVAYHLLRRPDGSFNRHLAEFLDRKAPANAMPSDGAASKDIII 251 ++K VVPL T+VLISNFK+ Y+LLRRPDG+FNRHLAEFLDRKAPANA G S D+++ Sbjct: 11 EAKMVVPLNTFVLISNFKLVYNLLRRPDGTFNRHLAEFLDRKAPANATAVSGVFSLDVVM 70
Query: 252 DRAIGLWGRLFWASDAYADPRVSLRKQPLLVYFHGGSFVHSSANSSIYDAMCRRIAKMCG 431 DR GLW R++ A +D + P++++FHGGSF HSSANS+IYD +CR + C Sbjct: 71 DRDSGLWSRIYTPVGATSDSAANAAGLPVIIFFHGGSFAHSSANSAIYDVLCRHFSSFCS 130
Query: 432 VVVFSVNFRRAPEHRCPAAYEDGATCIRW 518 +V SVN+RRAPEH PA YEDG T +RW Sbjct: 131 AIVVSVNYRRAPEHIYPAPYEDGWTALRW 159
>tr|B0S4S1|B0S4S1_PICGL Putative GID1-like gibberellin receptor OS=Picea glauca GN=GID1 PE=2 SV=1 Length = 352
Score = 188 bits (478), Expect = 2e-46 Identities = 86/149 (57%), Positives = 112/149 (75%) Frame = +3
Query: 72 DSKGVVPLTTWVLISNFKVAYHLLRRPDGSFNRHLAEFLDRKAPANAMPSDGAASKDIII 251 ++K VVPL T+VLISNFK+ Y+LLRRPDG+FNRHLAEFL+RKAPANA P S D+++ Sbjct: 11 EAKMVVPLNTFVLISNFKLVYNLLRRPDGTFNRHLAEFLERKAPANATPVSVVFSLDVVM 70
Query: 252 DRAIGLWGRLFWASDAYADPRVSLRKQPLLVYFHGGSFVHSSANSSIYDAMCRRIAKMCG 431 DR GLW R++ A +D ++ P++++FHGGSFVHSSANS+IYD +CR ++ C Sbjct: 71 DRDSGLWSRIYTPIAATSDSTANVAGLPVIIFFHGGSFVHSSANSAIYDVLCRHLSSFCS 130
Query: 432 VVVFSVNFRRAPEHRCPAAYEDGATCIRW 518 +V SVN+RRAPEH PA YEDG +RW Sbjct: 131 AIVISVNYRRAPEHIYPAPYEDGWAALRW 159
>tr|A9LY07|A9LY07_9TRAC Putative gibberellin receptor OS=Selaginella moellendorffii PE=2 SV=1 Length = 359
Score = 187 bits (476), Expect = 3e-46 Identities = 90/157 (57%), Positives = 112/157 (71%), Gaps = 2/157 (1%) Frame = +3
Query: 60 APLADSKGVVPLTTWVLISNFKVAYHLLRRPDGSFNRHLAEFLDRKAPANAMPSDGAASK 239 A L SK VVPL+TW+LIS KV Y L R DGSFNR+LAEF DRKA A+ P DG AS Sbjct: 7 AILKPSKDVVPLSTWILISKLKVEYMLTRGADGSFNRNLAEFHDRKASASLAPHDGVASM 66
Query: 240 DIIIDRAIGLWGRLFWASDAYADPRVSLR--KQPLLVYFHGGSFVHSSANSSIYDAMCRR 413 D+ IDR+ GLW R+F + AYA + R K P++ YFHGGS+ HSSAN+++YD +CR+ Sbjct: 67 DVTIDRSSGLWSRIFLPAIAYAQEEQANRDDKVPIIFYFHGGSYAHSSANTALYDMVCRQ 126
Query: 414 IAKMCGVVVFSVNFRRAPEHRCPAAYEDGATCIRWAK 524 + + C VV SVN+RRAPEHRCPAAY DG +RW + Sbjct: 127 LCRTCRAVVISVNYRRAPEHRCPAAYRDGLAALRWLR 163
>tr|B0S4T0|B0S4T0_9MAGN Putative GID1-like gibberellin receptor OS=Aquilegia formosa x Aquilegia pubescens GN=GID1 PE=2 SV=1 Length = 343
Score = 185 bits (470), Expect = 1e-45 Identities = 93/164 (56%), Positives = 114/164 (69%), Gaps = 9/164 (5%) Frame = +3
Query: 72 DSKGVVPLTTWVLISNFKVAYHLLRRPDGSFNRHLAEFLDRKAPANAMPSDGAASKDIII 251 +SK VPL TWVLISNFK+AY +LRRPDG+FNR+LAEFLDRK PANA P DG S D+II Sbjct: 11 ESKMAVPLNTWVLISNFKLAYTMLRRPDGTFNRNLAEFLDRKVPANANPVDGVFSFDVII 70
Query: 252 DRAIGLWGRLFWASDAY-ADPRVSLRKQPL--------LVYFHGGSFVHSSANSSIYDAM 404 DRA GL R++ + A P +QPL +V+FHGGSF HSSANS+IYD + Sbjct: 71 DRATGLLCRIYRQATAVPVQPSYMQLEQPLSSDVVVPVIVFFHGGSFAHSSANSAIYDTL 130
Query: 405 CRRIAKMCGVVVFSVNFRRAPEHRCPAAYEDGATCIRWAKRFLW 536 CRR+ + C VV SVN+RRAPE+R P AY+DG ++W W Sbjct: 131 CRRLVRNCKAVVVSVNYRRAPENRYPCAYDDGCAALKWVHSRAW 174
>tr|A5BRG2|A5BRG2_VITVI Putative uncharacterized protein (Chromosome chr14 scaffold_164, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00006107001 PE=4 SV=1 Length = 344
Score = 182 bits (463), Expect = 9e-45 Identities = 92/165 (55%), Positives = 118/165 (71%), Gaps = 8/165 (4%) Frame = +3
Query: 66 LADSKGVVPLTTWVLISNFKVAYHLLRRPDGSFNRHLAEFLDRKAPANAMPSDGAASKDI 245 L++SK VVPL TW+LISNFK+AY+LLRRPDG+FNRHLAEFLDRK PANA P +G S D+ Sbjct: 9 LSESKRVVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVEGVFSFDV 68
Query: 246 IIDRAIGLWGRLFW-ASDAYADPRV-SLRKQ------PLLVYFHGGSFVHSSANSSIYDA 401 IIDR+ L R++ A+ A P + L K P++++FHGGSF HSSANS+IYD Sbjct: 69 IIDRSTSLLSRIYRPATGEEALPSIMELEKPVTGDIVPVILFFHGGSFAHSSANSAIYDT 128
Query: 402 MCRRIAKMCGVVVFSVNFRRAPEHRCPAAYEDGATCIRWAKRFLW 536 +CRR+ +C VV SVN+RRAPE+ P AY+DG ++W W Sbjct: 129 LCRRLVGICKAVVVSVNYRRAPENPYPCAYDDGWAALKWVNSRPW 173
>tr|B0S4S3|B0S4S3_MEDTR Putative GID1-like gibberellin receptor OS=Medicago truncatula GN=GID1a PE=2 SV=1 Length = 345
Score = 179 bits (455), Expect = 7e-44 Identities = 91/163 (55%), Positives = 111/163 (68%), Gaps = 8/163 (4%) Frame = +3
Query: 72 DSKGVVPLTTWVLISNFKVAYHLLRRPDGSFNRHLAEFLDRKAPANAMPSDGAASKDIII 251 DSK VVPL WVLISNFK+AY+LLRRPDG+FNR LAEFLDRK PANA P DG S D+I+ Sbjct: 11 DSKMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPANANPVDGVFSFDVIV 70
Query: 252 DRAIGLWGRLFWASDAYAD--PRVSLRKQ------PLLVYFHGGSFVHSSANSSIYDAMC 407 DR L R++ + V L K P++++FHGGSF HSSANS+IYD +C Sbjct: 71 DRETNLLTRIYRPVEGEEQHVNIVDLEKPATAEVLPVVMFFHGGSFAHSSANSAIYDTLC 130
Query: 408 RRIAKMCGVVVFSVNFRRAPEHRCPAAYEDGATCIRWAKRFLW 536 RR+ +C VV SVN+RRAPE+R P AYEDG ++W W Sbjct: 131 RRLVGICNAVVVSVNYRRAPENRYPCAYEDGWKAVKWVNSRTW 173
>tr|A7PU21|A7PU21_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023625001 PE=4 SV=1 Length = 344
Score = 177 bits (448), Expect = 5e-43 Identities = 87/164 (53%), Positives = 110/164 (67%), Gaps = 9/164 (5%) Frame = +3
Query: 72 DSKGVVPLTTWVLISNFKVAYHLLRRPDGSFNRHLAEFLDRKAPANAMPSDGAASKDIII 251 +SK VVPL TW+LISNFK+AY+LLRRPDG+F R LAEFL+RKAPAN+ P DG S DI+ Sbjct: 11 ESKRVVPLNTWILISNFKLAYNLLRRPDGTFERELAEFLERKAPANSFPVDGVFSFDIV- 69
Query: 252 DRAIGLWGRLF---------WASDAYADPRVSLRKQPLLVYFHGGSFVHSSANSSIYDAM 404 D+ GL R++ W P + P++++FHGGSF HSSANS+IYD Sbjct: 70 DKTTGLLNRVYQPAPENEAQWGIIELEKPLSTTEIVPVILFFHGGSFTHSSANSAIYDYF 129
Query: 405 CRRIAKMCGVVVFSVNFRRAPEHRCPAAYEDGATCIRWAKRFLW 536 CRR+ C VV SVN+RR+PEHR P AY+DG ++W K W Sbjct: 130 CRRLVGNCKAVVVSVNYRRSPEHRYPCAYDDGWAALKWVKSRSW 173
>tr|A7U4T3|A7U4T3_9TRAC Putative gibberellin receptor OS=Selaginella kraussiana GN=GID1 PE=2 SV=1 Length = 367
Score = 176 bits (446), Expect = 8e-43 Identities = 90/165 (54%), Positives = 110/165 (66%), Gaps = 7/165 (4%) Frame = +3
Query: 45 AEDAAAPLADSKGVVPLTTWVLISNFKVAYHLLRRPDGSFNRHLAEFLDRK-APANAMPS 221 AE L +SK VVPL+TWVLISN KVAY L R+PDGSFNR LAEFLDRK AP N Sbjct: 5 AETERVQLKESKEVVPLSTWVLISNLKVAYTLARQPDGSFNRELAEFLDRKVAPCNV--- 61
Query: 222 DGAASKDIIIDRAIGLWGRLFWASDAYADPRVS------LRKQPLLVYFHGGSFVHSSAN 383 DG S D+++DR+ GLW R+F + V P+ YFHGGSF HSSAN Sbjct: 62 DGVVSMDVVMDRSTGLWSRIFIPTGGANHGNVGGGNGDGAATMPIFFYFHGGSFAHSSAN 121
Query: 384 SSIYDAMCRRIAKMCGVVVFSVNFRRAPEHRCPAAYEDGATCIRW 518 S++Y+ +C +A+ C VVV SVN+RR+PEHR PAAY+D AT + W Sbjct: 122 SALYNTVCTHVARHCQVVVISVNYRRSPEHRYPAAYDDCATAVHW 166
>tr|Q0PIN1|Q0PIN1_GOSHI Gibberellic acid receptor OS=Gossypium hirsutum PE=2 SV=1 Length = 344
Score = 176 bits (445), Expect = 1e-42 Identities = 88/166 (53%), Positives = 109/166 (65%), Gaps = 9/166 (5%) Frame = +3
Query: 66 LADSKGVVPLTTWVLISNFKVAYHLLRRPDGSFNRHLAEFLDRKAPANAMPSDGAASKDI 245 L +SK VVPL TWVLISNFK+AY+L RRPDG+FNR L+EFLDR+ PAN P DG S D Sbjct: 9 LNESKRVVPLNTWVLISNFKLAYNLQRRPDGTFNRDLSEFLDRRVPANINPVDGVFSFDH 68
Query: 246 IIDRAIGLWGRLF---------WASDAYADPRVSLRKQPLLVYFHGGSFVHSSANSSIYD 398 + D A GL R++ W P + P++V+FHGGSF HSSANS+IYD Sbjct: 69 V-DGATGLLNRVYQPSSLNEAQWGMVDLEKPLSTTEIVPVIVFFHGGSFTHSSANSAIYD 127
Query: 399 AMCRRIAKMCGVVVFSVNFRRAPEHRCPAAYEDGATCIRWAKRFLW 536 CRR+ +C VV SVN+RR+PEHR P AY+DG ++W K W Sbjct: 128 TFCRRLVSLCKAVVVSVNYRRSPEHRYPCAYDDGWAALKWVKSRTW 173
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