| DK955675 |
| Clone id |
TST39A01NGRL0023_L20 |
| Library |
TST39 |
| Length |
677 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_L20. 5' end sequence. |
| Accession |
DK955675 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
- |
| Sequence |
GTGCTCCTCACTGCACTGGATGTGTGAAAGATCATAACCTTGGTTTTGCCAAGGTTCACA
GTCAACCCCCTGTGTGTGCTGAATTCGTCCAAGGCCTCAAGATGGCGTTGCAAGCCCTCG
GGTGACTCTGAAATCAACACAATATCATCAGCATATAACATGATGTGGACCGGAGTACCT
GCCAAGTCTCTCCCCTCTCCTCCTGCTCGCAGTATGTAGTCGGAGATCTCGTCGATGTAG
AGCCCAAAGAGTGTCGGGGAGAGTGGGCATCCTTGCTTAACACCAATGGTGCTAGCAATG
GTCTCTGAAAAACCGCCTGGGCAACAAACTCGACCCGTCACCCTCTCGTAGAGAGCATAT
ATGGCCCAAATCATCTCTGTTGGTACCCCAATGCTGTGAAGGTGCTGGAAGAGTCTCTCG
CGTGGGACTGTGTCAAAGGCCTTGCGGAAATCCACAAAGCAGCAGTAAAGCCTCTTCTTC
CGCGCCTTTGCCCCATCAATGAGGCAGCGCAGAACGAAGATGTGATCAGTGGTGGAGAAA
GCTCGTCTGAAACCTGCCTGGCCTGGAGCTCGTAAACCCTCGATCTCTGCGTAGCAGCTG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q03274 |
| Definition |
sp|Q03274|PO22_POPJA Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica |
| Align length |
176 |
| Score (bit) |
72.0 |
| E-value |
3.0e-12 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955675|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_L20, 5'
(677 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q03274|PO22_POPJA Retrovirus-related Pol polyprotein from typ... 72 3e-12
sp|Q03278|PO21_NASVI Retrovirus-related Pol polyprotein from typ... 69 2e-11
sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog OS=Nyc... 67 7e-11
sp|P16423|POLR_DROME Retrovirus-related Pol polyprotein from typ... 66 1e-10
sp|Q03279|PO21_SCICO Retrovirus-related Pol polyprotein from typ... 63 1e-09
sp|Q05118|PO23_POPJA Retrovirus-related Pol polyprotein from typ... 59 2e-08
sp|P21329|RTJK_DROFU RNA-directed DNA polymerase from mobile ele... 59 3e-08
sp|P11369|POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1 O... 59 3e-08
sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa prot... 58 4e-08
sp|P34620|YO84_CAEEL Putative uncharacterized transposon-derived... 54 8e-07
sp|Q95SX7|RTBS_DROME Probable RNA-directed DNA polymerase from t... 42 0.003
sp|P19593|RDPO_SCEOB Probable reverse transcriptase OS=Scenedesm... 41 0.005
sp|P03876|AI2M_YEAST Putative COX1/OXI3 intron 2 protein OS=Sacc... 40 0.009
sp|P0C211|POL_HTL1L Gag-Pro-Pol polyprotein OS=Human T-cell leuk... 39 0.019
sp|Q10126|YSM6_CAEEL Putative uncharacterized transposon-derived... 37 0.074
sp|P11660|RTL_CHLRE Reverse transcriptase-like protein OS=Chlamy... 33 1.8
sp|Q8G7J3|ARAA_BIFLO L-arabinose isomerase OS=Bifidobacterium lo... 32 2.4
sp|Q8LKW0|TERT_ORYSJ Telomerase reverse transcriptase OS=Oryza s... 32 3.1
sp|A6QBN7|PRMA_SULNB Ribosomal protein L11 methyltransferase OS=... 32 3.1
sp|P19199|POL_COYMV Putative polyprotein OS=Commelina yellow mot... 32 3.1
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa... 32 4.0
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa... 32 4.0
sp|Q9T079|TPS4_ARATH Probable alpha,alpha-trehalose-phosphate sy... 32 4.0
sp|Q3J8Y4|Y2254_NITOC UPF0234 protein Noc_2254 OS=Nitrosococcus ... 31 5.3
sp|Q6A9J8|UVRC_PROAC UvrABC system protein C OS=Propionibacteriu... 31 5.3
sp|Q03275|PO24_POPJA Retrovirus-related Pol polyprotein from typ... 31 5.3
sp|Q9VI25|NCDN_DROME Neurochondrin homolog OS=Drosophila melanog... 31 5.3
sp|Q88922|COAT_TVCV Coat protein OS=Turnip vein-clearing virus G... 31 5.3
sp|Q2SL17|Y1818_HAHCH UPF0341 protein HCH_01818 OS=Hahella cheju... 31 6.9
sp|Q5SI32|UVRC_THET8 UvrABC system protein C OS=Thermus thermoph... 31 6.9
>sp|Q03274|PO22_POPJA Retrovirus-related Pol polyprotein from type-1
retrotransposable element R2 (Fragment) OS=Popillia
japonica PE=4 SV=1
Length = 711
Score = 72.0 bits (175), Expect = 3e-12
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 1/176 (0%)
Frame = -1
Query: 566 PGQAGFRRAFSTTDHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQHLHSIG 387
P Q G+ R T + +L I + ++K +D RKAFDTV + + L +G
Sbjct: 105 PAQKGYARIDGTLVNSLLLDTYISSRREQRKTYNVVSLDVRKAFDTVSHSSICRALQRLG 164
Query: 386 VPTEMI-WAIYALYERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEISDYIL 210
+ + +L + T PG + I GVKQG PLSP LF +DE+ +
Sbjct: 165 IDEGTSNYITGSLSDSTTTIRVGPGSQTRKICIRRGVKQGDPLSPFLFNAVLDELLCSLQ 224
Query: 209 RAGGEGRDLAGTPVHIMLYADDIVLISESPEGLQRHLEALDEFSTHRGLTVNLGKT 42
G G + + ++ +ADD++L+ ++ L L + F RG+++N K+
Sbjct: 225 STPGIGGTIGEEKIPVLAFADDLLLLEDNDVLLPTTLATVANFFRLRGMSLNAKKS 280
>sp|Q03278|PO21_NASVI Retrovirus-related Pol polyprotein from type-1
retrotransposable element R2 (Fragment) OS=Nasonia
vitripennis PE=4 SV=2
Length = 1025
Score = 68.9 bits (167), Expect = 2e-11
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Frame = -1
Query: 578 GLRAPGQAGFRRAFSTTDHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQHL 399
GL Q F A ++ +L +I A+ + K LY +D +KAFD+V + L
Sbjct: 414 GLLDTRQRAFIVADGVAENTSLLSAMIKEARMKIKGLYIAILDVKKAFDSVEHRSILDAL 473
Query: 398 HSIGVPTEMIWAIYALYERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEISD 219
+P EM I +Y R+ I GV+QG PLSP LF + D
Sbjct: 474 RRKKLPLEMRNYIMWVYRNSKTRLEVVKTKGRWIRPARGVRQGDPLSPLLFNC----VMD 529
Query: 218 YILRAGGE--GRDLAGTPVHIMLYADDIVLISESPEGLQRHLEALDEFSTHRGL 63
+LR E G + + +++ADD+VL++E+ EGLQ L ++ +GL
Sbjct: 530 AVLRRLPENTGFLMGAEKIGALVFADDLVLLAETREGLQASLSRIEAGLQEQGL 583
>sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog
OS=Nycticebus coucang PE=1 SV=1
Length = 1260
Score = 67.4 bits (163), Expect = 7e-11
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 5/185 (2%)
Frame = -1
Query: 566 PGQAGF---RRAFSTTDHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQHLH 396
PG G+ R++ + HI K + K +D KAFD + + + L
Sbjct: 567 PGSQGWFNIRKSINVIQHI---------NKLKNKDHMILSIDAEKAFDNIQHPFMIRTLK 617
Query: 395 SIGVPTEMIWAIYALYERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEISDY 216
IG+ + I A+Y + T + G ++ G +QGCPLSP LF + ++ ++
Sbjct: 618 KIGIEGTFLKLIEAIYSKPTANIILNGVKLKSFPLRSGTRQGCPLSPLLFNIVMEVLAIA 677
Query: 215 ILRAGG-EGRDLAGTPVHIMLYADD-IVLISESPEGLQRHLEALDEFSTHRGLTVNLGKT 42
I +G + + + L+ADD IV + + + + LE + E+S G +N K+
Sbjct: 678 IREEKAIKGIHIGSEEIKLSLFADDMIVYLENTRDSTTKLLEVIKEYSNVSGYKINTHKS 737
Query: 41 KVMIF 27
I+
Sbjct: 738 VAFIY 742
>sp|P16423|POLR_DROME Retrovirus-related Pol polyprotein from type-2
retrotransposable element R2DM OS=Drosophila
melanogaster GN=pol PE=4 SV=1
Length = 1057
Score = 66.2 bits (160), Expect = 1e-10
Identities = 48/174 (27%), Positives = 77/174 (44%)
Frame = -1
Query: 566 PGQAGFRRAFSTTDHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQHLHSIG 387
P Q GF D+ ++ ++ + + Y +D KAFD++ ++ L + G
Sbjct: 444 PRQRGFLPTDGCADNATIVDLVLRHSHKHFRSCYIANLDVSKAFDSLSHASIYDTLRAYG 503
Query: 386 VPTEMIWAIYALYERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEISDYILR 207
P + + YE + G SE GVKQG PLSP LF L +D + +
Sbjct: 504 APKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQGDPLSPILFNLVMDRLLRTL-- 561
Query: 206 AGGEGRDLAGTPVHIMLYADDIVLISESPEGLQRHLEALDEFSTHRGLTVNLGK 45
G + + +ADD+VL +E+ GLQ L+ +F + GL +N K
Sbjct: 562 PSEIGAKVGNAITNAAAFADDLVLFAETRMGLQVLLDKTLDFLSIVGLKLNADK 615
>sp|Q03279|PO21_SCICO Retrovirus-related Pol polyprotein from type-1
retrotransposable element R2 (Fragment) OS=Sciara
coprophila PE=4 SV=1
Length = 869
Score = 63.2 bits (152), Expect = 1e-09
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Frame = -1
Query: 524 HIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQHLHSIGVPTEMIWAIYALYE 345
++ +L +I AK +K L+ +D KAF++V L + G P ++ I +Y
Sbjct: 273 NVSMLTAIIAEAKRLRKELHIAILDLVKAFNSVYHSALIDAITEAGCPPGVVDYIADMYN 332
Query: 344 RVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEISDYILRA-GGEGR-DLAGTP 171
V + G E + GV QG PLS LF L ++ LRA EGR D+A
Sbjct: 333 NVITEMQFEGK-CELASILAGVYQGDPLSGPLFTLAYEKA----LRALNNEGRFDIADVR 387
Query: 170 VHIMLYADDIVLISESPEGLQRHLEALDEFSTHRGLTVNLGKTKVM 33
V+ Y+DD +L++ + GLQ +L+ E GL +N K+K +
Sbjct: 388 VNASAYSDDGLLLAMTVIGLQHNLDKFGETLAKIGLRINSRKSKTV 433
>sp|Q05118|PO23_POPJA Retrovirus-related Pol polyprotein from type-1
retrotransposable element R2 (Fragment) OS=Popillia
japonica PE=4 SV=1
Length = 606
Score = 58.9 bits (141), Expect = 2e-08
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 3/163 (1%)
Frame = -1
Query: 533 TTDHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQHLHSIGVPTEMIWAIYA 354
T +I +L I + + K +D RKAFDTV + + + + G+ M I +
Sbjct: 2 TLANIIMLEHYIKLRRLKGKTYNVVSLDIRKAFDTVSHPAILRAMRAFGIDDGMQDFIMS 61
Query: 353 LYERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEISDYILRAGGEGRDLAGT 174
+ G + I GVKQG PLSP LF + +DE+ + R E + T
Sbjct: 62 TITDAYTNIVVGGRTTNKIYIRNGVKQGDPLSPVLFNIVLDEL---VTRLNDEQPGASMT 118
Query: 173 P---VHIMLYADDIVLISESPEGLQRHLEALDEFSTHRGLTVN 54
P + + +ADD++L+ + + L + RG+T+N
Sbjct: 119 PACKIASLAFADDLLLLEDRDIDVPNSLATTCAYFRTRGMTLN 161
>sp|P21329|RTJK_DROFU RNA-directed DNA polymerase from mobile element
jockey OS=Drosophila funebris GN=pol PE=1 SV=1
Length = 916
Score = 58.5 bits (140), Expect = 3e-08
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 6/191 (3%)
Frame = -1
Query: 560 QAGFRRAFSTTDHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQHLHSIGVP 381
Q GFR T + + + A +K+ CF+D ++AFD V L S+ P
Sbjct: 550 QFGFRLQHGTPEQLHRVVNFALEALEKKEYAGSCFLDIQQAFDRVWHPGLLYKAKSLLSP 609
Query: 380 TEMIWAIYALYERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEISDYILRAG 201
++ I + +E V G S GV QG L PTL+ ++ ++ + G
Sbjct: 610 -QLFQLIKSFWEGRKFSVTADGCRSSVKFIEAGVPQGSVLGPTLYSIFTADMPNQNAVTG 668
Query: 200 GEGRDLAGTPVHIMLYADDIVLIS------ESPEGLQRHLEALDEFSTHRGLTVNLGKTK 39
LA V I YADDI +++ E+ + LQ +L+A E++ +++N GK
Sbjct: 669 -----LAEGEVLIATYADDIAVLTKSTCIVEATDALQEYLDAFQEWAVKWNVSINAGKCA 723
Query: 38 VMIFHTSSAVR 6
+ F ++A+R
Sbjct: 724 NVTF--TNAIR 732
>sp|P11369|POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1 OS=Mus
musculus GN=Pol PE=2 SV=2
Length = 1281
Score = 58.5 bits (140), Expect = 3e-08
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Frame = -1
Query: 488 KARKKRLYCCFVDFRKAFDTVPRERLFQHLHSIGVPTEMIWAIYALYERVTGRVCCPGGF 309
K + K +D KAFD + + + L G+ + I A+Y + + G
Sbjct: 595 KLKDKNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVANIKVNGEK 654
Query: 308 SETIASTIGVKQGCPLSPTLFGLYIDEISDYILRAGG-EGRDLAGTPVHIMLYADD-IVL 135
E I G +QGCPLSP LF + ++ ++ I + +G + V I L ADD IV
Sbjct: 655 LEAIPLKSGTRQGCPLSPYLFNIVLEVLARAIRQQKEIKGIQIGKEEVKISLLADDMIVY 714
Query: 134 ISESPEGLQRHLEALDEFSTHRGLTVNLGKTKVMIF 27
IS+ + L ++ F G +N K+ ++
Sbjct: 715 ISDPKNSTRELLNLINSFGEVVGYKINSNKSMAFLY 750
>sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein
OS=Xenopus laevis PE=4 SV=1
Length = 1308
Score = 58.2 bits (139), Expect = 4e-08
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Frame = -1
Query: 527 DHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQHLHSIGVPTEMIWAIYALY 348
D++F++R L+ A+ L +D KAFD V + L L + + + + +Y
Sbjct: 569 DNVFLIRDLLHFARRTGLSLAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYLKTMY 628
Query: 347 ERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEISDYILRAGGEGRDLAGTPV 168
V + +A GV+QGCPLS L+ L I+ +LR G L +
Sbjct: 629 ASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIEPFL-CLLRKRLTGLVLKEPDM 687
Query: 167 HIML--YADDIVLISESPEGLQRHLEALDEFSTHRGLTVNLGKTKVMI 30
++L YADD++L+++ L+R E + ++ +N K+ ++
Sbjct: 688 RVVLSAYADDVILVAQDLVDLERAQECQEVYAAASSARINWSKSSGLL 735
>sp|P34620|YO84_CAEEL Putative uncharacterized transposon-derived
protein ZK1236.4 OS=Caenorhabditis elegans GN=ZK1236.4
PE=5 SV=1
Length = 364
Score = 53.9 bits (128), Expect = 8e-07
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Frame = -1
Query: 458 FVDFRKAFDTVPRERLFQHLHSIGVPTEMIWAIYALYERVTGRVCCPGGFSETIASTIGV 279
++DF KAFD V + L L SI + +I + + +V SE + GV
Sbjct: 22 YLDFSKAFDKVSHDILLDKLTSIKINKHLIRWLDVFLTNRSFKVKVGNTLSEPKKTVCGV 81
Query: 278 KQGCPLSPTLFGLYIDEISDYILRAGGEGRDLAGTPVHIML--YADDIVLISESPE---- 117
QG +SP LFG++++EIS A PV + +ADDI L + P+
Sbjct: 82 PQGSVISPVLFGIFVNEIS-------------ANLPVGVYCKQFADDIKLYAAIPKNQSQ 128
Query: 116 -GLQRHLEALDEFSTHRGLTVNLGKT 42
LQ ++ + +++ + L +N KT
Sbjct: 129 ISLQLAIDVVTDWALNNKLLLNPSKT 154
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q9YW31 |
| Definition |
tr|Q9YW31|Q9YW31_MSEPV ORF MSV061 putative LINE reverse transcriptase, similar to Caenorhabditis elegans GB:U00063 OS=Melanoplus sanguinipes entomopoxvirus |
| Align length |
193 |
| Score (bit) |
107.0 |
| E-value |
5.0e-22 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955675|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_L20, 5'
(677 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q9YW31|Q9YW31_MSEPV ORF MSV061 putative LINE reverse transcri... 107 5e-22
tr|A8PDH4|A8PDH4_COPC7 Putative uncharacterized protein OS=Copri... 105 2e-21
tr|A4KWG0|A4KWG0_OSTNU Reverse transcriptase OS=Ostrinia nubilal... 103 1e-20
tr|A4KWF2|A4KWF2_OSTNU Reverse transcriptase OS=Ostrinia nubilal... 103 1e-20
tr|Q76IN6|Q76IN6_DANRE Reverse transcriptase OS=Danio rerio GN=r... 102 2e-20
tr|B3DJB3|B3DJB3_DANRE Putative uncharacterized protein OS=Danio... 100 1e-19
tr|Q1HW07|Q1HW07_PENMO Reverse transcriptase (Fragment) OS=Penae... 99 2e-19
tr|Q4QQE8|Q4QQE8_SCHMA Endonuclease-reverse transcriptase OS=Sch... 98 4e-19
tr|Q5C3A3|Q5C3A3_SCHJA SJCHGC09318 protein (Fragment) OS=Schisto... 97 9e-19
tr|Q76IN8|Q76IN8_CIOIN Reverse transcriptase (Fragment) OS=Ciona... 97 1e-18
tr|Q8T5G5|Q8T5G5_SCHJA Polyprotein OS=Schistosoma japonicum PE=4... 96 3e-18
tr|Q8MWP9|Q8MWP9_SCHJA Polyprotein (Fragment) OS=Schistosoma jap... 96 3e-18
tr|Q30KW9|Q30KW9_SCHMA Reverse transcriptase SR3-right (Fragment... 95 5e-18
tr|Q1AKH8|Q1AKH8_SOYBN Reverse transcriptase family member OS=Gl... 92 3e-17
tr|A8P1J7|A8P1J7_COPC7 Putative uncharacterized protein OS=Copri... 91 7e-17
tr|Q2HVM1|Q2HVM1_MEDTR RNA-directed DNA polymerase (Reverse tran... 91 9e-17
tr|O93521|O93521_ORYLA Reverse transcriptase OS=Oryzias latipes ... 90 1e-16
tr|Q9TZX4|Q9TZX4_CAEEL Reverse transcriptase OS=Caenorhabditis e... 90 1e-16
tr|Q76IM9|Q76IM9_CIOIN Reverse transcriptase OS=Ciona intestinal... 89 3e-16
tr|Q76IN9|Q76IN9_CIOIN Reverse transcriptase (Fragment) OS=Ciona... 88 6e-16
tr|Q30KX0|Q30KX0_SCHMA Reverse transcriptase SR3-left (Fragment)... 87 1e-15
tr|O93520|O93520_ORYLA Reverse transcriptase OS=Oryzias latipes ... 86 3e-15
tr|O44323|O44323_FORAU Reverse transcriptase (Fragment) OS=Forfi... 84 6e-15
tr|Q5K671|Q5K671_BOMMO Reverse transcriptase OS=Bombyx mori PE=4... 84 8e-15
tr|Q76B34|Q76B34_FUGRU Reverse transcriptase OS=Fugu rubripes GN... 84 1e-14
tr|B7QB19|B7QB19_IXOSC Reverse transcriptase, putative OS=Ixodes... 82 2e-14
tr|Q76IP1|Q76IP1_CIOIN Reverse transcriptase OS=Ciona intestinal... 82 3e-14
tr|O44319|O44319_9HEXA Reverse transcriptase (Fragment) OS=Anuri... 82 3e-14
tr|B7PS21|B7PS21_IXOSC Reverse transcriptase, putative OS=Ixodes... 82 3e-14
tr|Q8MY64|Q8MY64_BOMMO Reverse transcriptase OS=Bombyx mori PE=4... 82 4e-14
>tr|Q9YW31|Q9YW31_MSEPV ORF MSV061 putative LINE reverse
transcriptase, similar to Caenorhabditis elegans
GB:U00063 OS=Melanoplus sanguinipes entomopoxvirus
GN=MSV061 PE=4 SV=1
Length = 531
Score = 107 bits (268), Expect = 5e-22
Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 1/193 (0%)
Frame = -1
Query: 584 IEGLRAPGQAGFRRAFSTTDHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQ 405
+E L + Q+GFR+ S D+I++L +I + RKK Y F+DF+KAFD V RE L+
Sbjct: 198 MENLISEEQSGFRKNRSIKDNIYILHEII---RNRKKETYFAFIDFKKAFDNVDREILWN 254
Query: 404 HLHSIGVPTEMIWAIYALYERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEI 225
+H G P +I AI +LYE R+ S+ I G+KQGC +S +LF +YID I
Sbjct: 255 IMHLHGYPPHLINAIKSLYENT--RIIVK---SKVIKINKGIKQGCAVSLSLFNIYIDHI 309
Query: 224 SDYILRAGGEGRDL-AGTPVHIMLYADDIVLISESPEGLQRHLEALDEFSTHRGLTVNLG 48
+ + +G +L T ++ +LYADD+V+IS + ++ L+ S L ++
Sbjct: 310 MNEWKQHNIKGIELNDNTNLNYILYADDLVIISTNKNDFIHGIDMLNNLSKKYKLPISFE 369
Query: 47 KTKVMIFHTSSAV 9
KTKVM F + +
Sbjct: 370 KTKVMAFKGTETI 382
>tr|A8PDH4|A8PDH4_COPC7 Putative uncharacterized protein
OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
9003) GN=CC1G_09484 PE=4 SV=1
Length = 1355
Score = 105 bits (263), Expect = 2e-21
Identities = 68/193 (35%), Positives = 101/193 (52%)
Frame = -1
Query: 593 YAEIEGLRAPGQAGFRRAFSTTDHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRER 414
+AE GL P Q GFR + T +++F+LRC ID AKA +K LY FVD AF + +
Sbjct: 297 WAECRGLLPPSQNGFREGYRTNNNMFILRCAIDKAKASRKPLYVAFVDMTNAFPSTDQPT 356
Query: 413 LFQHLHSIGVPTEMIWAIYALYERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYI 234
L+ L + G ++ I LY + V SE +TIG+ G SP L+ LY+
Sbjct: 357 LWTKLRAWGAGGKVFDWIRKLYREMEYVVRHNNEQSEAFRATIGILIGDTCSPILWVLYM 416
Query: 233 DEISDYILRAGGEGRDLAGTPVHIMLYADDIVLISESPEGLQRHLEALDEFSTHRGLTVN 54
++ +I + L TPV + ADDI+L+S + GLQR + L + + +N
Sbjct: 417 ADLPQWIPN-DDDDVVLGTTPVTNLEQADDILLLSTTARGLQRKMSGLFRWCGRNFMIIN 475
Query: 53 LGKTKVMIFHTSS 15
K++VM+F T S
Sbjct: 476 SVKSEVMVFGTRS 488
>tr|A4KWG0|A4KWG0_OSTNU Reverse transcriptase OS=Ostrinia nubilalis
PE=4 SV=1
Length = 497
Score = 103 bits (256), Expect = 1e-20
Identities = 64/184 (34%), Positives = 98/184 (53%)
Frame = -1
Query: 584 IEGLRAPGQAGFRRAFSTTDHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQ 405
++ + P QAGFR+ FST DHI LR +I + + L FVD+ KAFD++ + Q
Sbjct: 101 LDDFQPPEQAGFRKGFSTIDHIHTLRQIIQKTEEYNQPLCLAFVDYEKAFDSIETWAVLQ 160
Query: 404 HLHSIGVPTEMIWAIYALYERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEI 225
L + I A+ LYE T V S+ I GV+QG +SP LF ++++
Sbjct: 161 SLQRCQIDYRHIEALKGLYENATMSVRLQDQNSKPIQLQRGVRQGDVISPKLFTTALEDV 220
Query: 224 SDYILRAGGEGRDLAGTPVHIMLYADDIVLISESPEGLQRHLEALDEFSTHRGLTVNLGK 45
+L G G ++ G + + +ADDIV+++E+ E L L+ L S GL +N+ K
Sbjct: 221 FK-LLDWNGFGININGEYITHLRFADDIVVMAETVEDLNTMLDGLSRASQQVGLKMNMDK 279
Query: 44 TKVM 33
TK+M
Sbjct: 280 TKIM 283
>tr|A4KWF2|A4KWF2_OSTNU Reverse transcriptase OS=Ostrinia nubilalis
PE=4 SV=1
Length = 478
Score = 103 bits (256), Expect = 1e-20
Identities = 64/184 (34%), Positives = 98/184 (53%)
Frame = -1
Query: 584 IEGLRAPGQAGFRRAFSTTDHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQ 405
++ + P QAGFR+ FST DHI LR +I + + L FVD+ KAFD++ + Q
Sbjct: 82 LDDFQPPEQAGFRKGFSTIDHIHTLRQIIQKTEEYNQPLCLAFVDYEKAFDSIETWAVLQ 141
Query: 404 HLHSIGVPTEMIWAIYALYERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEI 225
L + I A+ LYE T V S+ I GV+QG +SP LF ++++
Sbjct: 142 SLQRCQIDYRHIEALKGLYENATMSVRLQDQNSKPIQLQRGVRQGDVISPKLFTTALEDV 201
Query: 224 SDYILRAGGEGRDLAGTPVHIMLYADDIVLISESPEGLQRHLEALDEFSTHRGLTVNLGK 45
+L G G ++ G + + +ADDIV+++E+ E L L+ L S GL +N+ K
Sbjct: 202 FK-LLDWNGFGININGEYITHLRFADDIVVMAETVEDLNTMLDGLSRASQQVGLKMNMDK 260
Query: 44 TKVM 33
TK+M
Sbjct: 261 TKIM 264
>tr|Q76IN6|Q76IN6_DANRE Reverse transcriptase OS=Danio rerio GN=rt
PE=4 SV=1
Length = 1193
Score = 102 bits (255), Expect = 2e-20
Identities = 62/170 (36%), Positives = 91/170 (53%)
Frame = -1
Query: 566 PGQAGFRRAFSTTDHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQHLHSIG 387
P Q GFRR+ ++++ VL CL+ +K ++ +L FVDF +AFDTV E + L +
Sbjct: 557 PRQRGFRRSPGCSENLEVLECLLRHSKEKRSQLAVVFVDFAQAFDTVSHEHMLSVLEQMN 616
Query: 386 VPTEMIWAIYALYERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEISDYILR 207
V M+ I +Y V I +GVKQG PLSP LF L +D + + R
Sbjct: 617 VDPHMVNLIREIYTNSCTSVELGRKEGPDIPVRVGVKQGDPLSPLLFNLALDPLIQSLER 676
Query: 206 AGGEGRDLAGTPVHIMLYADDIVLISESPEGLQRHLEALDEFSTHRGLTV 57
G+G + G V + +ADD+ L++ S EG+ +L +DEF GLTV
Sbjct: 677 T-GKGCEAEGHKVTALAFADDLALVAGSWEGMAHNLALVDEFCLTTGLTV 725
>tr|B3DJB3|B3DJB3_DANRE Putative uncharacterized protein OS=Danio
rerio GN=zgc:194878 PE=2 SV=1
Length = 1193
Score = 100 bits (248), Expect = 1e-19
Identities = 60/170 (35%), Positives = 92/170 (54%)
Frame = -1
Query: 566 PGQAGFRRAFSTTDHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQHLHSIG 387
P Q GFR++ ++++ +L+C++ +K ++ +L FVDF +AFDTV E L L +
Sbjct: 557 PRQRGFRQSPGCSENLELLQCVLRHSKEKRSQLAVVFVDFAQAFDTVSHEHLLSVLERMN 616
Query: 386 VPTEMIWAIYALYERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEISDYILR 207
V M+ I +Y V I +GVKQG PLSP LF L +D + + R
Sbjct: 617 VDPHMVNLIREIYTNSCTSVELGRREGPDIPVRVGVKQGDPLSPLLFNLALDPLIQSLER 676
Query: 206 AGGEGRDLAGTPVHIMLYADDIVLISESPEGLQRHLEALDEFSTHRGLTV 57
G+G + G V + +ADD+ L++ S EG+ +L +DEF GLTV
Sbjct: 677 T-GKGYEAEGHKVTALAFADDLALVAGSWEGMAHNLALVDEFCLTTGLTV 725
>tr|Q1HW07|Q1HW07_PENMO Reverse transcriptase (Fragment) OS=Penaeus
monodon PE=4 SV=1
Length = 382
Score = 99.4 bits (246), Expect = 2e-19
Identities = 60/163 (36%), Positives = 86/163 (52%)
Frame = -1
Query: 566 PGQAGFRRAFSTTDHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQHLHSIG 387
P Q+GF ST D I VLR +++ + + L ++D +KAFD+V RE L++ L G
Sbjct: 216 PEQSGFTPGKSTIDRILVLRVIVERRREFGRGLLAAYIDLKKAFDSVHRESLWEILRLRG 275
Query: 386 VPTEMIWAIYALYERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEISDYILR 207
+P+++I I +LY V C GG S GV+QGC L+PTLF +D I
Sbjct: 276 IPSQIIGLIASLYTGTESAVKCGGGMSNFFPVKSGVRQGCVLAPTLFNTCMDWIMGRATS 335
Query: 206 AGGEGRDLAGTPVHIMLYADDIVLISESPEGLQRHLEALDEFS 78
G L V + +ADD+ ++SES E L + A D FS
Sbjct: 336 QSQCGATLGNIKVSDLDFADDVAILSESLESL---VAARDAFS 375
>tr|Q4QQE8|Q4QQE8_SCHMA Endonuclease-reverse transcriptase
OS=Schistosoma mansoni PE=2 SV=1
Length = 992
Score = 98.2 bits (243), Expect = 4e-19
Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 1/181 (0%)
Frame = -1
Query: 560 QAGFRRAFSTTDHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQHLHSIGVP 381
QAGFR+ S TD I LR +++ + LY F+D+ KAFD+V R L++ L GVP
Sbjct: 596 QAGFRKDRSCTDQIATLRIIVEQSIEWNSSLYINFIDYEKAFDSVDRTTLWKLLRHYGVP 655
Query: 380 TEMIWAIYALYERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEISDYILRAG 201
+++ I Y+ + ++ G +++ GV+QGC LSP LF L ID I G
Sbjct: 656 EKIVNIIRNSYDGLNCQIVHGGQLTDSFEVKTGVRQGCLLSPFLFLLVIDWIMKTSTSGG 715
Query: 200 GEGRDLAG-TPVHIMLYADDIVLISESPEGLQRHLEALDEFSTHRGLTVNLGKTKVMIFH 24
G G + + +ADD+ L+S++ + +Q ++ S GL +N GK+K + ++
Sbjct: 716 MHGIQWTGRMQLDDLDFADDLALLSQTQQQMQEKTTSVAAASAAVGLNINKGKSKTLRYN 775
Query: 23 T 21
T
Sbjct: 776 T 776
>tr|Q5C3A3|Q5C3A3_SCHJA SJCHGC09318 protein (Fragment)
OS=Schistosoma japonicum PE=2 SV=2
Length = 513
Score = 97.1 bits (240), Expect = 9e-19
Identities = 63/179 (35%), Positives = 92/179 (51%), Gaps = 2/179 (1%)
Frame = -1
Query: 560 QAGFRRAFSTTDHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQHLHSIGVP 381
QAGFR DHIF +R +++ A ++ F+D + AFD+V RE L+Q L GVP
Sbjct: 333 QAGFRPGRGCIDHIFTIRQVLEHRHAYRRPTMVVFLDLKAAFDSVDREVLWQCLSLKGVP 392
Query: 380 TEMIWAIYALYERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEISDYILRAG 201
+ I + + GRV G S ++ GV+Q CPLSP LF ID + D L +
Sbjct: 393 QKYINLVKLFTRTLPGRVTAYGELSSEFLTSSGVRQECPLSPFLFNFVIDMLLDITLSSS 452
Query: 200 G-EGRD-LAGTPVHIMLYADDIVLISESPEGLQRHLEALDEFSTHRGLTVNLGKTKVMI 30
G D L G + + YADDIVL E + +Q L L ++ G+ + K K+++
Sbjct: 453 DFSGVDFLPGASLTDLEYADDIVLFGEDADKMQSLLTTLSNNASMFGMRFSPSKCKMLL 511
>tr|Q76IN8|Q76IN8_CIOIN Reverse transcriptase (Fragment) OS=Ciona
intestinalis GN=rt PE=4 SV=1
Length = 806
Score = 96.7 bits (239), Expect = 1e-18
Identities = 58/170 (34%), Positives = 89/170 (52%)
Frame = -1
Query: 560 QAGFRRAFSTTDHIFVLRCLIDGAKARKKRLYCCFVDFRKAFDTVPRERLFQHLHSIGVP 381
Q FR +++ +L +I AKAR + L F+D KAFDTV + + L VP
Sbjct: 451 QRAFRDVQGCAENVMLLSGMIRDAKARSRDLNLVFLDLAKAFDTVSHSSIVKALRRQQVP 510
Query: 380 TEMIWAIYALYERVTGRVCCPGGFSETIASTIGVKQGCPLSPTLFGLYIDEISDYILRAG 201
+ + + LY+ V G + + GVKQGCPLSP LF L +DE+ D + +
Sbjct: 511 EKFVRIVQDLYDGAVTTVSVGGRATPQLVVKRGVKQGCPLSPLLFNLVLDELIDELSSSF 570
Query: 200 GEGRDLAGTPVHIMLYADDIVLISESPEGLQRHLEALDEFSTHRGLTVNL 51
G D G+ + +M +ADD+VL S S GL++ +E +F G+ +N+
Sbjct: 571 GYTLD-DGSKLSVMAFADDLVLSSGSLAGLRKLIETTQQFLLRCGMGLNV 619
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