DK955678 |
Clone id |
TST39A01NGRL0023_L23 |
Library |
TST39 |
Length |
520 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_L23. 5' end sequence. |
Accession |
DK955678 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL583Contig1 |
Sequence |
GGTAGACCCGTCGAAGGAGACCGACAACAACACTCCGATTCTAGCATCTGCAGCAGGAAC GCCACAACCCTCGCCATCGCCACCTGTAGAGCTTCTTCCTAGCGACCGGCCTCCCCTTCT TCCCTTAACAGCCGAATTGATTCAAGACAAAGAGACCGAGGAGAAGGACAGACGAGCTCG TGAAAGTGAGGATAGAGACCGCAAAAACAGAGAGATCAAGGCCGGCCTTCATCCTTTACA GCATCGGTTTGTCCTATGGTACACTAGGCGCTCTCCCGGGGCACGGACACAGACTGCTTA TGAAGAAAGCATCAAGAAAATAGCCGATTTCAGCACGGTTGAGGGTTTTTGGGGCTGTTA TTGTCACCTTGCACGTGTATCCTCTTTGCCCACTTCGACTGACTTTCATCTTTTCAAGGA GGGAATTCGACCCCTGTGGGAGGATGCCGCAAATCGCAATGGTGGAAAATGGATTATTCG CTTCAAAAAAATTGTCTCGGGACGGTTTTGGGAGGACTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FK59 |
Definition |
sp|Q9FK59|IF4E3_ARATH Eukaryotic translation initiation factor 4E type 3 OS=Arabidopsis thaliana |
Align length |
106 |
Score (bit) |
168.0 |
E-value |
2.0e-41 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RFE7 |
Definition |
tr|A9RFE7|A9RFE7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
126 |
Score (bit) |
198.0 |
E-value |
2.0e-49 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955678|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_L23, 5' (520 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RFE7|A9RFE7_PHYPA Predicted protein OS=Physcomitrella paten... 198 2e-49 tr|A7PW42|A7PW42_VITVI Chromosome chr8 scaffold_34, whole genome... 193 5e-48 tr|A3RCV9|A3RCV9_WHEAT Translation initiation factor nCBP OS=Tri... 185 1e-45 tr|B4FGA3|B4FGA3_MAIZE Putative uncharacterized protein OS=Zea m... 184 2e-45 tr|Q10NQ9|Q10NQ9_ORYSJ Os03g0262400 protein OS=Oryza sativa subs... 183 5e-45 tr|A2XES5|A2XES5_ORYSI Putative uncharacterized protein OS=Oryza... 183 5e-45 tr|B6T450|B6T450_MAIZE Eukaryotic translation initiation factor ... 181 1e-44 tr|A9P259|A9P259_PICSI Putative uncharacterized protein OS=Picea... 181 1e-44 tr|B5XEN3|B5XEN3_SALSA Eukaryotic translation initiation factor ... 124 2e-27 tr|A1L200|A1L200_DANRE Zgc:158544 protein OS=Danio rerio GN=zgc:... 124 4e-27 tr|Q6DER4|Q6DER4_XENTR MGC89871 protein (Eukaryotic translation ... 123 5e-27 tr|Q4FZQ5|Q4FZQ5_XENLA MGC116437 protein OS=Xenopus laevis GN=MG... 123 5e-27 tr|Q80ZJ3|Q80ZJ3_MOUSE Eif4e2 protein OS=Mus musculus GN=Eif4e2 ... 123 5e-27 tr|Q3UUT0|Q3UUT0_MOUSE Putative uncharacterized protein OS=Mus m... 123 5e-27 tr|Q0P688|Q0P688_MOUSE Eukaryotic translation initiation factor ... 123 5e-27 tr|B0BNH0|B0BNH0_RAT Eif4e2 protein OS=Rattus norvegicus GN=Eif4... 123 5e-27 tr|Q0II31|Q0II31_BOVIN Eukaryotic translation initiation factor ... 123 5e-27 tr|Q59FE1|Q59FE1_HUMAN Eukaryotic translation initiation factor ... 123 5e-27 tr|Q53RG0|Q53RG0_HUMAN cDNA FLJ12456 fis, clone NT2RM1000661, hi... 123 5e-27 tr|B9A044|B9A044_HUMAN Putative uncharacterized protein EIF4E2 O... 123 5e-27 tr|B8ZZJ9|B8ZZJ9_HUMAN Eukaryotic translation initiation factor ... 123 5e-27 tr|B8ZZ50|B8ZZ50_HUMAN Putative uncharacterized protein EIF4E2 O... 123 5e-27 tr|Q4RV79|Q4RV79_TETNG Chromosome 15 SCAF14992, whole genome sho... 122 8e-27 tr|Q9D334|Q9D334_MOUSE Putative uncharacterized protein OS=Mus m... 122 1e-26 tr|A6XJR1|A6XJR1_PIG Eukaryotic translation initiation factor 4E... 122 1e-26 tr|Q6PBU4|Q6PBU4_DANRE Zgc:73242 OS=Danio rerio GN=zgc:73242 PE=... 122 1e-26 tr|Q5R4J0|Q5R4J0_PONAB Putative uncharacterized protein DKFZp459... 121 2e-26 tr|Q8TA64|Q8TA64_PENJP Eukaryotic initiation factor elF4E like p... 121 2e-26 tr|A3KLJ3|A3KLJ3_STRPU Eukaryotic translation initiation factor ... 120 4e-26 tr|B6M764|B6M764_BRAFL Putative uncharacterized protein OS=Branc... 119 9e-26
>tr|A9RFE7|A9RFE7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113199 PE=3 SV=1 Length = 286
Score = 198 bits (503), Expect = 2e-49 Identities = 90/126 (71%), Positives = 101/126 (80%) Frame = +2
Query: 143 QDKETXXXXXXXXXXXXXXXKNREIKAGLHPLQHRFVLWYTRRSPGARTQTAYEESIKKI 322 +DKE + REI+AGLHPLQHRFV WYTRR PG R+QT+YE++IKKI Sbjct: 78 KDKENDEKNRRVREGDDRDRQTREIRAGLHPLQHRFVFWYTRRQPGIRSQTSYEDNIKKI 137
Query: 323 ADFSTVEGFWGCYCHLARVSSLPTSTDFHLFKEGIRPLWEDAANRNGGKWIIRFKKIVSG 502 ADFSTVEGFWG YCHLAR S+LP TD HLFKEGIRPLWEDAANR+GGKWIIRFKK+VSG Sbjct: 138 ADFSTVEGFWGIYCHLARASTLPNPTDLHLFKEGIRPLWEDAANRSGGKWIIRFKKLVSG 197
Query: 503 RFWEDL 520 R+WEDL Sbjct: 198 RYWEDL 203
>tr|A7PW42|A7PW42_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025466001 PE=3 SV=1 Length = 225
Score = 193 bits (490), Expect = 5e-48 Identities = 84/104 (80%), Positives = 96/104 (92%) Frame = +2
Query: 209 REIKAGLHPLQHRFVLWYTRRSPGARTQTAYEESIKKIADFSTVEGFWGCYCHLARVSSL 388 R++KAGLHPL+H+FV WYTRR+PG RTQT+YE++IKKI DFSTVEGFW CYCHLAR S+L Sbjct: 39 RDLKAGLHPLKHKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWICYCHLARPSAL 98
Query: 389 PTSTDFHLFKEGIRPLWEDAANRNGGKWIIRFKKIVSGRFWEDL 520 P+ TD HLFKEGIRPLWED+AN NGGKWIIRFKK+VSGRFWEDL Sbjct: 99 PSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDL 142
>tr|A3RCV9|A3RCV9_WHEAT Translation initiation factor nCBP OS=Triticum aestivum PE=2 SV=1 Length = 232
Score = 185 bits (469), Expect = 1e-45 Identities = 83/106 (78%), Positives = 94/106 (88%) Frame = +2
Query: 203 KNREIKAGLHPLQHRFVLWYTRRSPGARTQTAYEESIKKIADFSTVEGFWGCYCHLARVS 382 +NRE+KAGLHPL+ + VLWYTRR+PG R+Q+ YE++IKKI DFSTVE FW CYCHLAR S Sbjct: 45 RNRELKAGLHPLRRKLVLWYTRRTPGTRSQS-YEDNIKKIVDFSTVESFWVCYCHLARPS 103
Query: 383 SLPTSTDFHLFKEGIRPLWEDAANRNGGKWIIRFKKIVSGRFWEDL 520 SLP+ TD HLFKEG+RPLWED ANRNGGKWIIRFKK VSGRFWEDL Sbjct: 104 SLPSPTDLHLFKEGVRPLWEDPANRNGGKWIIRFKKAVSGRFWEDL 149
>tr|B4FGA3|B4FGA3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 229
Score = 184 bits (468), Expect = 2e-45 Identities = 82/106 (77%), Positives = 96/106 (90%) Frame = +2
Query: 203 KNREIKAGLHPLQHRFVLWYTRRSPGARTQTAYEESIKKIADFSTVEGFWGCYCHLARVS 382 +NR++K+GLHPL+H+ VLWYTRR+PGAR+Q+ YE++IKKI DFSTVE FW CYCHLAR S Sbjct: 42 RNRDLKSGLHPLRHKLVLWYTRRTPGARSQS-YEDNIKKIIDFSTVESFWVCYCHLARPS 100
Query: 383 SLPTSTDFHLFKEGIRPLWEDAANRNGGKWIIRFKKIVSGRFWEDL 520 SLP+ TD HLFK+GIRPLWED AN+NGGKWIIRFKK VSGRFWEDL Sbjct: 101 SLPSPTDLHLFKDGIRPLWEDPANQNGGKWIIRFKKAVSGRFWEDL 146
>tr|Q10NQ9|Q10NQ9_ORYSJ Os03g0262400 protein OS=Oryza sativa subsp. japonica GN=Os03g0262400 PE=2 SV=1 Length = 227
Score = 183 bits (464), Expect = 5e-45 Identities = 83/106 (78%), Positives = 93/106 (87%) Frame = +2
Query: 203 KNREIKAGLHPLQHRFVLWYTRRSPGARTQTAYEESIKKIADFSTVEGFWGCYCHLARVS 382 +NRE+KAG HPL+ RFVLWYTRR+PGAR+Q+ YE++IKKI DFSTVE FW CYCHL R Sbjct: 40 RNRELKAGFHPLRRRFVLWYTRRTPGARSQS-YEDNIKKIVDFSTVESFWVCYCHLTRPV 98
Query: 383 SLPTSTDFHLFKEGIRPLWEDAANRNGGKWIIRFKKIVSGRFWEDL 520 SLP+ TD HLFKEGIRPLWED ANR+GGKWIIRFKK VSGRFWEDL Sbjct: 99 SLPSPTDLHLFKEGIRPLWEDPANRSGGKWIIRFKKTVSGRFWEDL 144
>tr|A2XES5|A2XES5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10838 PE=3 SV=1 Length = 227
Score = 183 bits (464), Expect = 5e-45 Identities = 83/106 (78%), Positives = 93/106 (87%) Frame = +2
Query: 203 KNREIKAGLHPLQHRFVLWYTRRSPGARTQTAYEESIKKIADFSTVEGFWGCYCHLARVS 382 +NRE+KAG HPL+ RFVLWYTRR+PGAR+Q+ YE++IKKI DFSTVE FW CYCHL R Sbjct: 40 RNRELKAGFHPLRRRFVLWYTRRTPGARSQS-YEDNIKKIVDFSTVESFWVCYCHLTRPV 98
Query: 383 SLPTSTDFHLFKEGIRPLWEDAANRNGGKWIIRFKKIVSGRFWEDL 520 SLP+ TD HLFKEGIRPLWED ANR+GGKWIIRFKK VSGRFWEDL Sbjct: 99 SLPSPTDLHLFKEGIRPLWEDPANRSGGKWIIRFKKTVSGRFWEDL 144
>tr|B6T450|B6T450_MAIZE Eukaryotic translation initiation factor 4E type 3 OS=Zea mays PE=2 SV=1 Length = 229
Score = 181 bits (460), Expect = 1e-44 Identities = 81/106 (76%), Positives = 95/106 (89%) Frame = +2
Query: 203 KNREIKAGLHPLQHRFVLWYTRRSPGARTQTAYEESIKKIADFSTVEGFWGCYCHLARVS 382 +NR++K+GLHPL+H+ VLWYTRR+ GAR+Q+ YE++IKKI DFSTVE FW CYCHLAR S Sbjct: 42 RNRDLKSGLHPLRHKLVLWYTRRTXGARSQS-YEDNIKKIIDFSTVESFWVCYCHLARPS 100
Query: 383 SLPTSTDFHLFKEGIRPLWEDAANRNGGKWIIRFKKIVSGRFWEDL 520 SLP+ TD HLFK+GIRPLWED AN+NGGKWIIRFKK VSGRFWEDL Sbjct: 101 SLPSPTDLHLFKDGIRPLWEDPANQNGGKWIIRFKKAVSGRFWEDL 146
>tr|A9P259|A9P259_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 245
Score = 181 bits (460), Expect = 1e-44 Identities = 84/131 (64%), Positives = 97/131 (74%) Frame = +2
Query: 128 TAELIQDKETXXXXXXXXXXXXXXXKNREIKAGLHPLQHRFVLWYTRRSPGARTQTAYEE 307 TAE+I +KE +RE++AGLHPLQHRFV WY RR PG R+Q +YEE Sbjct: 33 TAEMI-NKEKEDRARREKEAEERERHSRELRAGLHPLQHRFVFWYLRRQPGVRSQASYEE 91
Query: 308 SIKKIADFSTVEGFWGCYCHLARVSSLPTSTDFHLFKEGIRPLWEDAANRNGGKWIIRFK 487 ++KKI +FSTVEGFW CYCH ARVSS+P T+ HLFKEGIRPLWED NR+GGKWIIR Sbjct: 92 NMKKIVEFSTVEGFWVCYCHFARVSSMPNPTNLHLFKEGIRPLWEDPGNRSGGKWIIRLN 151
Query: 488 KIVSGRFWEDL 520 K VSGRFWEDL Sbjct: 152 KAVSGRFWEDL 162
>tr|B5XEN3|B5XEN3_SALSA Eukaryotic translation initiation factor 4E type 2 OS=Salmo salar GN=IF4E2 PE=2 SV=1 Length = 223
Score = 124 bits (312), Expect = 2e-27 Identities = 54/101 (53%), Positives = 74/101 (73%), Gaps = 1/101 (0%) Frame = +2
Query: 221 AGLHPLQHRFVLWYTRRSPGARTQT-AYEESIKKIADFSTVEGFWGCYCHLARVSSLPTS 397 AG HPLQ+ + LWY+RR+P T +YE++I++I ++VE FW Y HL R L Sbjct: 40 AGEHPLQYNYTLWYSRRTPSRPANTQSYEQNIRQIGTVASVEQFWKFYSHLVRPGDLTGH 99
Query: 398 TDFHLFKEGIRPLWEDAANRNGGKWIIRFKKIVSGRFWEDL 520 +DFHLFKEGI+P+WED AN+NGGKWIIR +K ++ RFWE++ Sbjct: 100 SDFHLFKEGIKPMWEDEANKNGGKWIIRLRKGLASRFWENI 140
>tr|A1L200|A1L200_DANRE Zgc:158544 protein OS=Danio rerio GN=zgc:158544 PE=2 SV=1 Length = 236
Score = 124 bits (310), Expect = 4e-27 Identities = 54/101 (53%), Positives = 74/101 (73%), Gaps = 1/101 (0%) Frame = +2
Query: 221 AGLHPLQHRFVLWYTRRSPGARTQT-AYEESIKKIADFSTVEGFWGCYCHLARVSSLPTS 397 AG HPLQ+ + WY+RR+PG T +YE++IK+I F++VE FW Y H+ R L Sbjct: 50 AGEHPLQYNYTFWYSRRTPGRPASTQSYEQNIKQIGSFASVEQFWRFYSHMIRPGDLTGH 109
Query: 398 TDFHLFKEGIRPLWEDAANRNGGKWIIRFKKIVSGRFWEDL 520 +DFHLFKEGI+P+WED AN++GGKWIIR +K ++ R WE+L Sbjct: 110 SDFHLFKEGIKPMWEDDANKSGGKWIIRLRKGLASRCWENL 150
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