DK955680 |
Clone id |
TST39A01NGRL0023_M01 |
Library |
TST39 |
Length |
706 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_M01. 5' end sequence. |
Accession |
DK955680 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1021Contig1 |
Sequence |
GCAGCTTCATCGCCGCCATGTTCACCGCGCGGAGGAAAATCCACAAGGAGAAGGGCCTCG AGCCTGATGATTTCGAGGAGTCTGTAGCTCAGGCTTTCTTTGATCTGGAGAACAGTAATC AAGAGCTCAGAAGTGATTTGAAGGATTTGTTCATAAACTCTGCCAAGCAGGTAGATATTT CTGGTAGCAGAAAGGCTGTTATCATTCATGTACCATACAGACTTCGAAAAGCTTTCCGGA AAATTCATGTGCGGCTTGTACGGGAATTGGAAAAGAAGTTTAGTGGCAAGGAAGTGATCA TGATTGCAACAAGGCGCATCATGAGACCCCCCAAAAAGGGAACTGCTACAGCTCGCCCTA GAAGCCGTACCTTGACTGCTGTTCATGAAGCCATTTTGGAAGATCTAGTGTATCCAGCTG AGATTGTGGGGAAGCGAGTGCGCTTCCGCTTGGATGGGTCCCGAGTTATGAGAGTCTATC TGGACCCTAAGGAGCGTAATAGTACCGAATACAAGTTGGAGACTTTTAGCGGTGTGTACA AAAAGCTTACTGGAAAGGAAGTTGTATTTCGATTATCCAGTGCCCAGAAGCAGCCTAACT CAGAATTTTATTATGGGTTACAATTATTTTTGGCCCATTTACCTGGATTTTGAAGCTCGG GGGGAGGAGTGGGTTTTGTAGGAATTTCCATTTTGTTGAGAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8LJU5 |
Definition |
sp|Q8LJU5|RS7_ORYSJ 40S ribosomal protein S7 OS=Oryza sativa subsp. japonica |
Align length |
184 |
Score (bit) |
295.0 |
E-value |
2.0e-79 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S5I8 |
Definition |
tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
183 |
Score (bit) |
318.0 |
E-value |
3.0e-85 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955680|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_M01, 5' (706 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella paten... 318 3e-85 tr|A9T1N9|A9T1N9_PHYPA Predicted protein OS=Physcomitrella paten... 315 2e-84 tr|A9NQ60|A9NQ60_PICSI Putative uncharacterized protein OS=Picea... 312 1e-83 tr|A9SXW3|A9SXW3_PHYPA Predicted protein OS=Physcomitrella paten... 311 2e-83 tr|A9TXW9|A9TXW9_PHYPA Predicted protein OS=Physcomitrella paten... 311 3e-83 tr|B6SHM7|B6SHM7_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 301 2e-80 tr|B3TLX3|B3TLX3_ELAGV Ribosomal protein S7 OS=Elaeis guineensis... 301 2e-80 tr|Q3HRX6|Q3HRX6_SOLTU Putative uncharacterized protein (40S rib... 300 5e-80 tr|Q10MS5|Q10MS5_ORYSJ Os03g0297100 protein OS=Oryza sativa subs... 300 6e-80 tr|Q10MS4|Q10MS4_ORYSJ 40S ribosomal protein S7, putative, expre... 300 6e-80 tr|A2XFL9|A2XFL9_ORYSI Putative uncharacterized protein OS=Oryza... 300 6e-80 tr|A2XFL8|A2XFL8_ORYSI Putative uncharacterized protein OS=Oryza... 300 6e-80 tr|B7FGT0|B7FGT0_MEDTR Putative uncharacterized protein OS=Medic... 300 8e-80 tr|Q5I7K2|Q5I7K2_WHEAT Ribosomal protein S7 OS=Triticum aestivum... 298 2e-79 tr|A5AWN5|A5AWN5_VITVI Putative uncharacterized protein (Chromos... 298 2e-79 tr|B7FMQ4|B7FMQ4_MEDTR Putative uncharacterized protein OS=Medic... 298 2e-79 tr|B3TM44|B3TM44_ELAGV Ribosomal protein S7 OS=Elaeis guineensis... 298 2e-79 tr|B4FZN6|B4FZN6_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 298 3e-79 tr|A5AFQ8|A5AFQ8_VITVI Putative uncharacterized protein (Chromos... 298 3e-79 tr|B8AX04|B8AX04_ORYSI Putative uncharacterized protein OS=Oryza... 297 4e-79 tr|Q0DIZ8|Q0DIZ8_ORYSJ Os05g0346300 protein OS=Oryza sativa subs... 295 2e-78 tr|B6TE31|B6TE31_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 294 3e-78 tr|A9PBB9|A9PBB9_POPTR Putative uncharacterized protein OS=Popul... 293 1e-77 tr|Q1KUR6|Q1KUR6_9ROSI Putative uncharacterized protein OS=Cleom... 292 2e-77 tr|A9PEW2|A9PEW2_POPTR Putative uncharacterized protein OS=Popul... 291 3e-77 tr|A9PBS2|A9PBS2_POPTR Putative uncharacterized protein OS=Popul... 290 6e-77 tr|A9PCT6|A9PCT6_POPTR Putative uncharacterized protein OS=Popul... 290 8e-77 tr|A9PBV3|A9PBV3_POPTR Putative uncharacterized protein OS=Popul... 290 8e-77 tr|Q1KUM0|Q1KUM0_9ROSI Putative uncharacterized protein OS=Cleom... 288 2e-76 tr|A3B2X6|A3B2X6_ORYSJ Putative uncharacterized protein OS=Oryza... 286 1e-75
>tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_208894 PE=4 SV=1 Length = 195
Score = 318 bits (814), Expect = 3e-85 Identities = 155/183 (84%), Positives = 175/183 (95%) Frame = +3
Query: 21 FTARRKIHKEKGLEPDDFEESVAQAFFDLENSNQELRSDLKDLFINSAKQVDISGSRKAV 200 FTARRKI KEKG EPD+FEESVAQA FDLE++N EL+S+L+DLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 201 IIHVPYRLRKAFRKIHVRLVRELEKKFSGKEVIMIATRRIMRPPKKGTATARPRSRTLTA 380 +IHVPYRLRKAF+KIH RLVRELEKKFSGK+VI+IATRRI+RPPKKG+A RPRSRTLTA Sbjct: 63 VIHVPYRLRKAFQKIHARLVRELEKKFSGKDVIVIATRRILRPPKKGSAVNRPRSRTLTA 122
Query: 381 VHEAILEDLVYPAEIVGKRVRFRLDGSRVMRVYLDPKERNSTEYKLETFSGVYKKLTGKE 560 VHEA+LEDLVYP+EIVGKRVR+RLDGSR+MRVYLDPKERNSTEYKLETF+GVYKKLTGKE Sbjct: 123 VHEAVLEDLVYPSEIVGKRVRYRLDGSRIMRVYLDPKERNSTEYKLETFAGVYKKLTGKE 182
Query: 561 VVF 569 V F Sbjct: 183 VTF 185
>tr|A9T1N9|A9T1N9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_86905 PE=4 SV=1 Length = 195
Score = 315 bits (807), Expect = 2e-84 Identities = 153/183 (83%), Positives = 174/183 (95%) Frame = +3
Query: 21 FTARRKIHKEKGLEPDDFEESVAQAFFDLENSNQELRSDLKDLFINSAKQVDISGSRKAV 200 FTARRKI KEKG EPD+FEESVAQA FDLE++N EL+S+L+DLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 201 IIHVPYRLRKAFRKIHVRLVRELEKKFSGKEVIMIATRRIMRPPKKGTATARPRSRTLTA 380 IIHVPYRLRKAF+KIH RLVRELEKKFSGK+V++IATRRI+RPPKKG+A RPRSRTLT Sbjct: 63 IIHVPYRLRKAFQKIHARLVRELEKKFSGKDVVVIATRRILRPPKKGSAVNRPRSRTLTT 122
Query: 381 VHEAILEDLVYPAEIVGKRVRFRLDGSRVMRVYLDPKERNSTEYKLETFSGVYKKLTGKE 560 VHEA+LEDLVYP+EIVGKRVR+RLDGSR+MRVYLDPKERN+TEYKLETF+GVYKKLTGKE Sbjct: 123 VHEAVLEDLVYPSEIVGKRVRYRLDGSRIMRVYLDPKERNTTEYKLETFAGVYKKLTGKE 182
Query: 561 VVF 569 V F Sbjct: 183 VTF 185
>tr|A9NQ60|A9NQ60_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 192
Score = 312 bits (800), Expect = 1e-83 Identities = 151/184 (82%), Positives = 174/184 (94%) Frame = +3
Query: 18 MFTARRKIHKEKGLEPDDFEESVAQAFFDLENSNQELRSDLKDLFINSAKQVDISGSRKA 197 M+TARRKI KEK EP++FEESVAQA FDLE++NQEL+S+LKDLFINSA Q DISG+RKA Sbjct: 1 MYTARRKIQKEKNAEPNEFEESVAQALFDLESTNQELKSELKDLFINSASQYDISGNRKA 60
Query: 198 VIIHVPYRLRKAFRKIHVRLVRELEKKFSGKEVIMIATRRIMRPPKKGTATARPRSRTLT 377 V++HVPYRLRKAFRKIHVRLVRELEKKFSGK+V++IATRRI+RPPKKG+A RPRSRTLT Sbjct: 61 VVVHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVVIATRRIVRPPKKGSAAVRPRSRTLT 120
Query: 378 AVHEAILEDLVYPAEIVGKRVRFRLDGSRVMRVYLDPKERNSTEYKLETFSGVYKKLTGK 557 AVHEAILEDLVYPAEIVGKRVR+RLDGS++M++YLDPKERN+TEYKLETF GVY+KL GK Sbjct: 121 AVHEAILEDLVYPAEIVGKRVRYRLDGSKIMKIYLDPKERNNTEYKLETFGGVYRKLCGK 180
Query: 558 EVVF 569 +VVF Sbjct: 181 DVVF 184
>tr|A9SXW3|A9SXW3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234408 PE=4 SV=1 Length = 195
Score = 311 bits (798), Expect = 2e-83 Identities = 151/183 (82%), Positives = 175/183 (95%) Frame = +3
Query: 21 FTARRKIHKEKGLEPDDFEESVAQAFFDLENSNQELRSDLKDLFINSAKQVDISGSRKAV 200 FTARRKI KEKG EPD+FEESVAQA FDLE+++ EL+S+L+DLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTSSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 201 IIHVPYRLRKAFRKIHVRLVRELEKKFSGKEVIMIATRRIMRPPKKGTATARPRSRTLTA 380 IIHVPYRLRKAF+KIH RLVRELEKKFSGK+V++IATRRI+RPPKKG+A RPRSRTLTA Sbjct: 63 IIHVPYRLRKAFQKIHARLVRELEKKFSGKDVVIIATRRILRPPKKGSAVNRPRSRTLTA 122
Query: 381 VHEAILEDLVYPAEIVGKRVRFRLDGSRVMRVYLDPKERNSTEYKLETFSGVYKKLTGKE 560 VHEA+LEDLV+P+EIVGKRVR+RLDGSR+MRVYLDPKERN+TEYKL+TF+GVYKKLTGKE Sbjct: 123 VHEAVLEDLVHPSEIVGKRVRYRLDGSRIMRVYLDPKERNTTEYKLDTFAGVYKKLTGKE 182
Query: 561 VVF 569 V F Sbjct: 183 VTF 185
>tr|A9TXW9|A9TXW9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172596 PE=4 SV=1 Length = 195
Score = 311 bits (797), Expect = 3e-83 Identities = 151/183 (82%), Positives = 172/183 (93%) Frame = +3
Query: 21 FTARRKIHKEKGLEPDDFEESVAQAFFDLENSNQELRSDLKDLFINSAKQVDISGSRKAV 200 FTARRKI KE G EPD+FEESVAQA FDLE++N EL+S+L+DLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKENGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 201 IIHVPYRLRKAFRKIHVRLVRELEKKFSGKEVIMIATRRIMRPPKKGTATARPRSRTLTA 380 IIHVP+RLRKAF+KIH RLVRELEKKFSGK+V+ I TRRI+RPPKKG+A RPRSRTLTA Sbjct: 63 IIHVPFRLRKAFQKIHARLVRELEKKFSGKDVVFIVTRRILRPPKKGSAVNRPRSRTLTA 122
Query: 381 VHEAILEDLVYPAEIVGKRVRFRLDGSRVMRVYLDPKERNSTEYKLETFSGVYKKLTGKE 560 VHEA+LEDLVYP+EIVGKR+R+RLDGSR+MRVYLDPKERNSTEYKLET+SGVYKKLTGKE Sbjct: 123 VHEAVLEDLVYPSEIVGKRMRYRLDGSRIMRVYLDPKERNSTEYKLETYSGVYKKLTGKE 182
Query: 561 VVF 569 V F Sbjct: 183 VTF 185
>tr|B6SHM7|B6SHM7_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2 SV=1 Length = 192
Score = 301 bits (772), Expect = 2e-80 Identities = 142/184 (77%), Positives = 174/184 (94%) Frame = +3
Query: 18 MFTARRKIHKEKGLEPDDFEESVAQAFFDLENSNQELRSDLKDLFINSAKQVDISGSRKA 197 M+TAR+KI KEKGLEP +FE+SVAQAFFDLEN NQEL+SDLKDL+IN+A Q+D++GSRKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSDLKDLYINNAIQMDVTGSRKA 60
Query: 198 VIIHVPYRLRKAFRKIHVRLVRELEKKFSGKEVIMIATRRIMRPPKKGTATARPRSRTLT 377 V+IHVPYRLRKAFRKIHVRLVRELEKKFSGK+V+++ATRRI+RPPKKG+A RPR+RTLT Sbjct: 61 VVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVLRPRTRTLT 120
Query: 378 AVHEAILEDLVYPAEIVGKRVRFRLDGSRVMRVYLDPKERNSTEYKLETFSGVYKKLTGK 557 AVH+ ILED+VYPAEIVGKRVR+RLDGS++++++LDPKERN+TEYKLET + VY++L GK Sbjct: 121 AVHDGILEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLETCTAVYRRLCGK 180
Query: 558 EVVF 569 +VVF Sbjct: 181 DVVF 184
>tr|B3TLX3|B3TLX3_ELAGV Ribosomal protein S7 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 191
Score = 301 bits (772), Expect = 2e-80 Identities = 142/184 (77%), Positives = 173/184 (94%) Frame = +3
Query: 18 MFTARRKIHKEKGLEPDDFEESVAQAFFDLENSNQELRSDLKDLFINSAKQVDISGSRKA 197 M+TAR+KI KEK +EP +FEE VAQA FDLEN+NQEL+SDLKDL+INSA Q+D++G+RKA Sbjct: 1 MYTARKKIQKEKDVEPTEFEEIVAQALFDLENTNQELKSDLKDLYINSAVQIDVAGNRKA 60
Query: 198 VIIHVPYRLRKAFRKIHVRLVRELEKKFSGKEVIMIATRRIMRPPKKGTATARPRSRTLT 377 V+IHVPYRLRKAFRKIHVRLVRE+EKKFSGK+VI IATRRI+RPPKKG+A RPRSRTLT Sbjct: 61 VVIHVPYRLRKAFRKIHVRLVREMEKKFSGKDVIFIATRRILRPPKKGSAVVRPRSRTLT 120
Query: 378 AVHEAILEDLVYPAEIVGKRVRFRLDGSRVMRVYLDPKERNSTEYKLETFSGVYKKLTGK 557 VHEA+LED+VYPAEIVGKR+R+RLDGS++++++LDPKERN+TEYKL++F+GVY+KLTGK Sbjct: 121 HVHEAMLEDIVYPAEIVGKRIRYRLDGSKIIKIFLDPKERNNTEYKLDSFAGVYRKLTGK 180
Query: 558 EVVF 569 VVF Sbjct: 181 NVVF 184
>tr|Q3HRX6|Q3HRX6_SOLTU Putative uncharacterized protein (40S ribosomal protein S7-like protein-like) (Ribosomal protein S7-like protein) OS=Solanum tuberosum PE=2 SV=1 Length = 191
Score = 300 bits (769), Expect = 5e-80 Identities = 142/184 (77%), Positives = 173/184 (94%) Frame = +3
Query: 18 MFTARRKIHKEKGLEPDDFEESVAQAFFDLENSNQELRSDLKDLFINSAKQVDISGSRKA 197 M+T+++KIHK+K EP +FE SVAQAFFDLEN+NQEL+S+LKDL+INSA Q+D+SG+RKA Sbjct: 1 MYTSKQKIHKDKDAEPSEFEVSVAQAFFDLENTNQELKSELKDLYINSATQIDVSGNRKA 60
Query: 198 VIIHVPYRLRKAFRKIHVRLVRELEKKFSGKEVIMIATRRIMRPPKKGTATARPRSRTLT 377 V+IHVPYRLRKAFRK+HVRLVRELEKKFSGK+VI IATRRI+RPPK+G+A RPR+RTLT Sbjct: 61 VVIHVPYRLRKAFRKVHVRLVRELEKKFSGKDVIFIATRRIVRPPKRGSAAQRPRTRTLT 120
Query: 378 AVHEAILEDLVYPAEIVGKRVRFRLDGSRVMRVYLDPKERNSTEYKLETFSGVYKKLTGK 557 +VH+AILEDLV PAEIVGKR R+R+DGS++M+VYLDPKERN+TEYKLETFS VY+KL+GK Sbjct: 121 SVHDAILEDLVVPAEIVGKRTRYRVDGSKIMKVYLDPKERNNTEYKLETFSAVYRKLSGK 180
Query: 558 EVVF 569 +VVF Sbjct: 181 DVVF 184
>tr|Q10MS5|Q10MS5_ORYSJ Os03g0297100 protein OS=Oryza sativa subsp. japonica GN=Os03g0297100 PE=2 SV=1 Length = 192
Score = 300 bits (768), Expect = 6e-80 Identities = 140/184 (76%), Positives = 174/184 (94%) Frame = +3
Query: 18 MFTARRKIHKEKGLEPDDFEESVAQAFFDLENSNQELRSDLKDLFINSAKQVDISGSRKA 197 M+TAR+KI KEKGLEP +FE+SVAQAFFDLEN NQEL+S+LKDL+IN+A Q+DI+G+RKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 198 VIIHVPYRLRKAFRKIHVRLVRELEKKFSGKEVIMIATRRIMRPPKKGTATARPRSRTLT 377 V+IHVPYRLRKAF+KIHVRLVRELEKKFSGK+V+++ATRRI+RPPKKG+A RPR+RTLT Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVQRPRTRTLT 120
Query: 378 AVHEAILEDLVYPAEIVGKRVRFRLDGSRVMRVYLDPKERNSTEYKLETFSGVYKKLTGK 557 AVH+ ILED+VYPAEIVGKR+R+RLDG++V++++LDPKERN+TEYKLETFS VY++L GK Sbjct: 121 AVHDGILEDVVYPAEIVGKRIRYRLDGAKVIKIFLDPKERNNTEYKLETFSAVYRRLCGK 180
Query: 558 EVVF 569 +V F Sbjct: 181 DVAF 184
>tr|Q10MS4|Q10MS4_ORYSJ 40S ribosomal protein S7, putative, expressed (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=LOC_Os03g18580 PE=4 SV=1 Length = 192
Score = 300 bits (768), Expect = 6e-80 Identities = 140/184 (76%), Positives = 174/184 (94%) Frame = +3
Query: 18 MFTARRKIHKEKGLEPDDFEESVAQAFFDLENSNQELRSDLKDLFINSAKQVDISGSRKA 197 M+TAR+KI KEKGLEP +FE+SVAQAFFDLEN NQEL+S+LKDL+IN+A Q+DI+G+RKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 198 VIIHVPYRLRKAFRKIHVRLVRELEKKFSGKEVIMIATRRIMRPPKKGTATARPRSRTLT 377 V+IHVPYRLRKAF+KIHVRLVRELEKKFSGK+V+++ATRRI+RPPKKG+A RPR+RTLT Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVQRPRTRTLT 120
Query: 378 AVHEAILEDLVYPAEIVGKRVRFRLDGSRVMRVYLDPKERNSTEYKLETFSGVYKKLTGK 557 AVH+ ILED+VYPAEIVGKR+R+RLDG++V++++LDPKERN+TEYKLETFS VY++L GK Sbjct: 121 AVHDCILEDVVYPAEIVGKRIRYRLDGAKVIKIFLDPKERNNTEYKLETFSAVYRRLCGK 180
Query: 558 EVVF 569 +V F Sbjct: 181 DVAF 184
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