DK955687 |
Clone id |
TST39A01NGRL0023_M08 |
Library |
TST39 |
Length |
539 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_M08. 5' end sequence. |
Accession |
DK955687 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL679Contig1 |
Sequence |
CTCGTCTCGCGAGTCCCATCGGCCATATCCATAGCACCTGCGGCTCATCTGTAGGCCGGA GAGCTATCTTCCAGAAAGAAAATGAGGGAAATTCTCCACATTCAAGGTGGCCAATGCGGC AATCAAATTGGTTCCAAGTTTTGGGAGGTGATCTGTGATGAACATGGCATTGACCCCACA GGTTCTTACAAGGGTGATTCGGAGCTGCAGCTTGAGCGTATCAATGTCTATTTCAATGAA GCCAGTGGGGGAAGATATGTGCCTAGGGCAGTTCTCATGGATCTGGAGCCTGGTACTATG GATAGTGTGCGTACGGGACCGCTGGGACAAATTTTTAGGCCTGATAACTTTGTGTTTGGC CAAAGTGGAGCTGGAAACAACTGGGCCAAAGGACACTACACTGAAGGTGCTGAACTTATC GACTCTGTTTTGGATGTTGTAAGGAAAGAGGCGGAGAATTGTGACTGTCTTCAAGGTTTT GAAGTCTGCCATTCTCTAGGAGGCGGCACTGGTTCTGGTATTGGGAACACTACTCATCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P28551 |
Definition |
sp|P28551|TBB3_SOYBN Tubulin beta chain (Fragment) OS=Glycine max |
Align length |
139 |
Score (bit) |
281.0 |
E-value |
1.0e-75 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4FTM1 |
Definition |
tr|B4FTM1|B4FTM1_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
164 |
Score (bit) |
283.0 |
E-value |
4.0e-75 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955687|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_M08, 5' (539 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4FTM1|B4FTM1_MAIZE Putative uncharacterized protein OS=Zea m... 283 4e-75 tr|A7KQH3|A7KQH3_EUCGR Beta-tubulin OS=Eucalyptus grandis GN=TUB... 281 2e-74 tr|A9SKU2|A9SKU2_PHYPA Predicted protein OS=Physcomitrella paten... 280 3e-74 tr|Q0DA75|Q0DA75_ORYSJ Os06g0671900 protein OS=Oryza sativa subs... 280 3e-74 tr|A3BEJ5|A3BEJ5_ORYSJ cDNA clone:J023010B07, full insert sequen... 280 3e-74 tr|A2YG29|A2YG29_ORYSI Putative uncharacterized protein OS=Oryza... 280 3e-74 tr|Q10CU1|Q10CU1_ORYSJ Os03g0780600 protein OS=Oryza sativa subs... 280 4e-74 tr|A2XMI9|A2XMI9_ORYSI Putative uncharacterized protein OS=Oryza... 280 4e-74 tr|B8AY97|B8AY97_ORYSI Putative uncharacterized protein OS=Oryza... 279 6e-74 tr|A3B412|A3B412_ORYSJ Putative uncharacterized protein OS=Oryza... 279 6e-74 tr|Q0E3L8|Q0E3L8_ORYSJ Os02g0167300 protein OS=Oryza sativa subs... 279 8e-74 tr|A9RY37|A9RY37_PHYPA Predicted protein OS=Physcomitrella paten... 279 8e-74 tr|A9PEU0|A9PEU0_POPTR Putative uncharacterized protein OS=Popul... 279 8e-74 tr|A5CFY6|A5CFY6_HORVD Beta tubulin 3 OS=Hordeum vulgare var. di... 279 8e-74 tr|A2X1B6|A2X1B6_ORYSI Putative uncharacterized protein OS=Oryza... 279 8e-74 tr|Q676U1|Q676U1_9SOLA Beta-tubulin OS=Nicotiana attenuata GN=TU... 278 1e-73 tr|Q38MV0|Q38MV0_SOLLC Beta-tubulin OS=Solanum lycopersicum GN=T... 278 1e-73 tr|B8AAY0|B8AAY0_ORYSI Putative uncharacterized protein OS=Oryza... 278 1e-73 tr|B5M4B1|B5M4B1_SOLTU Beta-tubulin OS=Solanum tuberosum PE=2 SV=1 278 1e-73 tr|A5ANL9|A5ANL9_VITVI Putative uncharacterized protein OS=Vitis... 278 1e-73 tr|A4ZYP3|A4ZYP3_CAPAN Beta tubulin OS=Capsicum annuum PE=2 SV=1 278 1e-73 tr|A7PH61|A7PH61_VITVI Chromosome chr17 scaffold_16, whole genom... 278 1e-73 tr|A5CFY8|A5CFY8_HORVD Beta tubulin 5 OS=Hordeum vulgare var. di... 278 1e-73 tr|Q8GZ16|Q8GZ16_ARATH Putative tubulin beta-1 chain (At1g75780)... 277 2e-73 tr|Q2TFP1|Q2TFP1_SOYBN Tubulin B4 OS=Glycine max PE=2 SV=1 277 2e-73 tr|A7PG08|A7PG08_VITVI Chromosome chr6 scaffold_15, whole genome... 277 2e-73 tr|A5CFY5|A5CFY5_HORVD Beta tubulin 2 OS=Hordeum vulgare var. di... 277 2e-73 tr|Q6TYR3|Q6TYR3_PHYPA Beta-tubulin 5 OS=Physcomitrella patens G... 277 3e-73 tr|Q0DI63|Q0DI63_ORYSJ Os05g0413200 protein OS=Oryza sativa subs... 277 3e-73 tr|A9SM68|A9SM68_PHYPA Predicted protein OS=Physcomitrella paten... 277 3e-73
>tr|B4FTM1|B4FTM1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 496
Score = 283 bits (724), Expect = 4e-75 Identities = 135/164 (82%), Positives = 145/164 (88%) Frame = +1
Query: 7 SRVPSAISIAPAAHL*AGELSSRKKMREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGS 186 SR+P AP A G + KMREILHIQGGQCGNQIG+KFWEV+CDEHGIDPTG Sbjct: 27 SRLPDLARSAPVASQ-FGSSHTSAKMREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGR 85
Query: 187 YKGDSELQLERINVYFNEASGGRYVPRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQS 366 Y G+S+LQLER+NVY+NEAS GR+VPRAVLMDLEPGTMDSVRTGP GQIFRPDNFVFGQS Sbjct: 86 YTGNSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQS 145
Query: 367 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFEVCHSL 498 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF+VCHSL Sbjct: 146 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSL 189
>tr|A7KQH3|A7KQH3_EUCGR Beta-tubulin OS=Eucalyptus grandis GN=TUB4 PE=2 SV=1 Length = 449
Score = 281 bits (718), Expect = 2e-74 Identities = 130/139 (93%), Positives = 135/139 (97%) Frame = +1
Query: 82 MREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGRYV 261 MREILHIQGGQCGNQIG+KFWEVICDEHGID TG Y GDSELQLERINVY+NEASGGRYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDATGKYNGDSELQLERINVYYNEASGGRYV 60
Query: 262 PRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 441 PRAVLMDLEPGTMDSVR+GP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 442 RKEAENCDCLQGFEVCHSL 498 RKEAENCDCLQGF+VCHSL Sbjct: 121 RKEAENCDCLQGFQVCHSL 139
>tr|A9SKU2|A9SKU2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_232451 PE=3 SV=1 Length = 444
Score = 280 bits (717), Expect = 3e-74 Identities = 128/139 (92%), Positives = 137/139 (98%) Frame = +1
Query: 82 MREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGRYV 261 MREILHIQGGQCGNQIG+KFWEVICDEHGIDPTG+Y GDS+LQLER+NVYFNEASGGRYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDPTGTYHGDSDLQLERVNVYFNEASGGRYV 60
Query: 262 PRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 441 PRAVLMDLEPGTMDSVR+GP GQIFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVV Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 442 RKEAENCDCLQGFEVCHSL 498 RKEAE+CDCLQGF+VCHS+ Sbjct: 121 RKEAESCDCLQGFQVCHSM 139
>tr|Q0DA75|Q0DA75_ORYSJ Os06g0671900 protein OS=Oryza sativa subsp. japonica GN=Os06g0671900 PE=3 SV=1 Length = 433
Score = 280 bits (716), Expect = 3e-74 Identities = 130/139 (93%), Positives = 135/139 (97%) Frame = +1
Query: 82 MREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGRYV 261 MREILHIQGGQCGNQIG+KFWEVICDEHGID TG Y GDS+LQLERINVY+NEASGGRYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 262 PRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 441 PRAVLMDLEPGTMDSVR+GP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 442 RKEAENCDCLQGFEVCHSL 498 RKEAENCDCLQGF+VCHSL Sbjct: 121 RKEAENCDCLQGFQVCHSL 139
>tr|A3BEJ5|A3BEJ5_ORYSJ cDNA clone:J023010B07, full insert sequence OS=Oryza sativa subsp. japonica GN=OsJ_021467 PE=2 SV=1 Length = 446
Score = 280 bits (716), Expect = 3e-74 Identities = 130/139 (93%), Positives = 135/139 (97%) Frame = +1
Query: 82 MREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGRYV 261 MREILHIQGGQCGNQIG+KFWEVICDEHGID TG Y GDS+LQLERINVY+NEASGGRYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 262 PRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 441 PRAVLMDLEPGTMDSVR+GP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 442 RKEAENCDCLQGFEVCHSL 498 RKEAENCDCLQGF+VCHSL Sbjct: 121 RKEAENCDCLQGFQVCHSL 139
>tr|A2YG29|A2YG29_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24075 PE=3 SV=1 Length = 446
Score = 280 bits (716), Expect = 3e-74 Identities = 130/139 (93%), Positives = 135/139 (97%) Frame = +1
Query: 82 MREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGRYV 261 MREILHIQGGQCGNQIG+KFWEVICDEHGID TG Y GDS+LQLERINVY+NEASGGRYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 262 PRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 441 PRAVLMDLEPGTMDSVR+GP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 442 RKEAENCDCLQGFEVCHSL 498 RKEAENCDCLQGF+VCHSL Sbjct: 121 RKEAENCDCLQGFQVCHSL 139
>tr|Q10CU1|Q10CU1_ORYSJ Os03g0780600 protein OS=Oryza sativa subsp. japonica GN=Os03g0780600 PE=2 SV=1 Length = 444
Score = 280 bits (715), Expect = 4e-74 Identities = 129/139 (92%), Positives = 135/139 (97%) Frame = +1
Query: 82 MREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGRYV 261 MREILHIQGGQCGNQIG+KFWEVICDEHG+D TG Y GDS+LQLERINVY+NEASGGRYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 262 PRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 441 PRAVLMDLEPGTMDSVR+GP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 442 RKEAENCDCLQGFEVCHSL 498 RKEAENCDCLQGF+VCHSL Sbjct: 121 RKEAENCDCLQGFQVCHSL 139
>tr|A2XMI9|A2XMI9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13743 PE=3 SV=1 Length = 444
Score = 280 bits (715), Expect = 4e-74 Identities = 129/139 (92%), Positives = 135/139 (97%) Frame = +1
Query: 82 MREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGRYV 261 MREILHIQGGQCGNQIG+KFWEVICDEHG+D TG Y GDS+LQLERINVY+NEASGGRYV Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 262 PRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 441 PRAVLMDLEPGTMDSVR+GP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 442 RKEAENCDCLQGFEVCHSL 498 RKEAENCDCLQGF+VCHSL Sbjct: 121 RKEAENCDCLQGFQVCHSL 139
>tr|B8AY97|B8AY97_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19960 PE=4 SV=1 Length = 624
Score = 279 bits (714), Expect = 6e-74 Identities = 129/141 (91%), Positives = 136/141 (96%) Frame = +1
Query: 76 KKMREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGR 255 +KMREILHIQGGQCGNQIGSKFWEV+CDEHGIDPTG Y G S+LQLER+NVY+NEAS GR Sbjct: 179 EKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGR 238
Query: 256 YVPRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 435 +VPRAVLMDLEPGTMDSVRTGP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD Sbjct: 239 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 298
Query: 436 VVRKEAENCDCLQGFEVCHSL 498 VVRKEAENCDCLQGF+VCHSL Sbjct: 299 VVRKEAENCDCLQGFQVCHSL 319
>tr|A3B412|A3B412_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017784 PE=3 SV=1 Length = 624
Score = 279 bits (714), Expect = 6e-74 Identities = 129/141 (91%), Positives = 136/141 (96%) Frame = +1
Query: 76 KKMREILHIQGGQCGNQIGSKFWEVICDEHGIDPTGSYKGDSELQLERINVYFNEASGGR 255 +KMREILHIQGGQCGNQIGSKFWEV+CDEHGIDPTG Y G S+LQLER+NVY+NEAS GR Sbjct: 179 EKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGR 238
Query: 256 YVPRAVLMDLEPGTMDSVRTGPLGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 435 +VPRAVLMDLEPGTMDSVRTGP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD Sbjct: 239 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 298
Query: 436 VVRKEAENCDCLQGFEVCHSL 498 VVRKEAENCDCLQGF+VCHSL Sbjct: 299 VVRKEAENCDCLQGFQVCHSL 319
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