DK955689 |
Clone id |
TST39A01NGRL0023_M10 |
Library |
TST39 |
Length |
476 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_M10. 5' end sequence. |
Accession |
DK955689 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GGCCGCACAACTTTGTACAAGAAAGTTGGGTTTTTTTTTTTTTTTTTTTTCATACAAACA CAAAGTAATTAGCTAAGGAGCGACCGGGAAGATTATCAAATTGGTATTCTGAGTTCCGTG TTCAGGAAGAAATTCCTGCATAGATATCGATGCCTTTACGACCATTTTCGGGAGGCAGGT GCCCATACTCACTTGTTGCTTCAATGTACTTCCCAAAAGAGAATGGCCTGTAGCGTGGTG GGCAATACTCTCCGTCCACGGTGCATGCAGGCTGGATCAAAAGGTCAGAAGGAGGCCTGC TTGACAGAAGAAAGGAGAGGCGATGTCTATCGCGGTTCAACACGACCCTGTGAATCCCAG CCTGCAGAACACCATTGCTCCATCCCTGCAAAACGTCGTTGATAAAGATGATGATACCAT CTCTCTTGTAGTCCACAAGATGCCAGCTGCTTCCATCCTTCCCGAGTATCTGCAGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O49561 |
Definition |
sp|O49561|G2OX8_ARATH Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana |
Align length |
86 |
Score (bit) |
35.8 |
E-value |
0.072 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P5M6 |
Definition |
tr|A7P5M6|A7P5M6_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
118 |
Score (bit) |
54.7 |
E-value |
2.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955689|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_M10, 5' (426 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P5M6|A7P5M6_VITVI Chromosome chr4 scaffold_6, whole genome ... 55 2e-06 tr|A9LY20|A9LY20_9TRAC Gibberellin 20-oxidase-like protein OS=Se... 54 5e-06 tr|A9NYW4|A9NYW4_PICSI Putative uncharacterized protein OS=Picea... 49 1e-04 tr|A9S0V0|A9S0V0_PHYPA Predicted protein OS=Physcomitrella paten... 48 2e-04 tr|A5B7X5|A5B7X5_VITVI Putative uncharacterized protein OS=Vitis... 47 5e-04 tr|B2WHP1|B2WHP1_PYRTR Flavonol synthase/flavanone 3-hydroxylase... 47 5e-04 tr|A5B3E7|A5B3E7_VITVI Putative uncharacterized protein OS=Vitis... 47 6e-04 tr|Q5D0G3|Q5D0G3_SPIOL Gibberellin 2-oxidase 3 OS=Spinacia olera... 46 8e-04 tr|A9U436|A9U436_PHYPA Predicted protein (Fragment) OS=Physcomit... 46 8e-04 tr|A9NNT1|A9NNT1_PICSI Putative uncharacterized protein OS=Picea... 46 8e-04 tr|Q6T6I0|Q6T6I0_9ROSI Gibberellin 3-oxidase OS=Populus tremula ... 46 0.001 tr|Q0H3G8|Q0H3G8_WHEAT Flavanone 3-hydroxylase (Fragment) OS=Tri... 46 0.001 tr|A4S6U7|A4S6U7_OSTLU Predicted protein OS=Ostreococcus lucimar... 46 0.001 tr|A9NSV2|A9NSV2_PICSI Putative uncharacterized protein OS=Picea... 45 0.001 tr|A3QRM4|A3QRM4_SOYBN Senescence-associated nodulin 1A OS=Glyci... 45 0.002 tr|A3QRM3|A3QRM3_SOYBN Senescence-associated nodulin 1A OS=Glyci... 45 0.002 tr|A9P1I3|A9P1I3_PICSI Putative uncharacterized protein OS=Picea... 44 0.004 tr|A7P9D1|A7P9D1_VITVI Chromosome chr3 scaffold_8, whole genome ... 44 0.004 tr|A5BD50|A5BD50_VITVI Putative uncharacterized protein OS=Vitis... 44 0.004 tr|Q8GT57|Q8GT57_CUCMA Gibberellin 3-oxidase OS=Cucurbita maxima... 44 0.005 tr|A9NW35|A9NW35_PICSI Putative uncharacterized protein OS=Picea... 44 0.005 tr|A2YSK1|A2YSK1_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.005 tr|Q00WQ2|Q00WQ2_OSTTA Iron/ascorbate family oxidoreductases (IS... 43 0.007 tr|A8I1T0|A8I1T0_CHLRE Oxygenase-like protein OS=Chlamydomonas r... 42 0.012 tr|A7QFR3|A7QFR3_VITVI Chromosome undetermined scaffold_89, whol... 42 0.012 tr|A7P9C7|A7P9C7_VITVI Chromosome chr3 scaffold_8, whole genome ... 42 0.012 tr|A5BSR8|A5BSR8_VITVI Putative uncharacterized protein OS=Vitis... 42 0.012 tr|A3QRM2|A3QRM2_SOYBN Senescence-associated nodulin 1B OS=Glyci... 42 0.012 tr|Q0UBE8|Q0UBE8_PHANO Putative uncharacterized protein OS=Phaeo... 42 0.012 tr|Q59J01|Q59J01_9ROSA Gibberellin 3-beta hydroxylase OS=Prunus ... 42 0.015
>tr|A7P5M6|A7P5M6_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032590001 PE=4 SV=1 Length = 252
Score = 54.7 bits (130), Expect = 2e-06 Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 1/118 (0%) Frame = -2
Query: 425 LQILGKDGSSWHLVDYKRDGIIIFINDVLQGWSNGVLQAGIHRVVLNXXXXXXXXXXXXX 246 L++L K+G+ W +++ +D I+ I D+L+ W+NG L A HRVV+N Sbjct: 143 LEVLSKEGN-WIRLNFCKDSFIVIIGDLLKAWTNGRLHAVRHRVVMNGDKDRYSCGMFVL 201
Query: 245 XXXXXLIQ-PACTVDGEYCPPRYRPFSFGKYIEATSEYGHLPPENGRKGIDIYAGISS 75 I+ P VD ++ P RYRPF++ Y+ +++YAG+ S Sbjct: 202 PGDTVTIEVPEELVDNDH-PLRYRPFTYSDYM------SFFTSNICDDALEVYAGVRS 252
>tr|A9LY20|A9LY20_9TRAC Gibberellin 20-oxidase-like protein OS=Selaginella moellendorffii PE=2 SV=1 Length = 397
Score = 53.5 bits (127), Expect = 5e-06 Identities = 34/109 (31%), Positives = 51/109 (46%) Frame = -2
Query: 410 KDGSSWHLVDYKRDGIIIFINDVLQGWSNGVLQAGIHRVVLNXXXXXXXXXXXXXXXXXX 231 KDG W V + D +I + DV Q W+NG ++ HR V+N Sbjct: 292 KDGR-WIAVKPRPDTFVINLGDVFQAWTNGRYKSVEHRAVVNQKQGRLSMVFFYGPQEDY 350
Query: 230 LIQPACTVDGEYCPPRYRPFSFGKYIEATSEYGHLPPENGRKGIDIYAG 84 +I P + E P RYRPF++G Y A P +G++ +D++AG Sbjct: 351 VITPPDELIDEDHPLRYRPFTWGDYSAARLSI----PAHGKRHLDVFAG 395
>tr|A9NYW4|A9NYW4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 370
Score = 48.9 bits (115), Expect = 1e-04 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 2/106 (1%) Frame = -2
Query: 425 LQILGKDGSSWHLVDYKRDGIIIFINDVLQGWSNGVLQAGIHRVVLNXXXXXXXXXXXXX 246 LQ+ KDG W V D +I + D +Q WSN ++ HRVV+N Sbjct: 253 LQVRRKDGE-WIGVKPVPDSFVINVGDCIQVWSNDKYESVEHRVVVNDKKERFSIPFFLN 311
Query: 245 XXXXXLIQPACTVDGEYCPPRYRPFSFGKYIEA--TSEYGHLPPEN 114 +++PA + E P +Y+ +++GK++++ S + HL EN Sbjct: 312 PSHYAMVRPALELVNEENPIKYKEYNWGKFLKSRYESNFKHLGIEN 357
>tr|A9S0V0|A9S0V0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_122538 PE=3 SV=1 Length = 347
Score = 48.1 bits (113), Expect = 2e-04 Identities = 32/107 (29%), Positives = 49/107 (45%) Frame = -2
Query: 410 KDGSSWHLVDYKRDGIIIFINDVLQGWSNGVLQAGIHRVVLNXXXXXXXXXXXXXXXXXX 231 ++ W LV D ++ I D+LQ SNG ++ +HRV++N Sbjct: 240 EEDGQWILVPPIPDAFVVNIGDLLQIVSNGRYKSVMHRVLVNNTVGRFSIPNFFMPSKET 299
Query: 230 LIQPACTVDGEYCPPRYRPFSFGKYIEATSEYGHLPPENGRKGIDIY 90 +IQP + E PP YR F F +YI ++ P GR+ ID + Sbjct: 300 IIQPLKELLSESNPPLYRSFKFAEYIAGF----YIKPLTGRRLIDSF 342
>tr|A5B7X5|A5B7X5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008387 PE=3 SV=1 Length = 329
Score = 47.0 bits (110), Expect = 5e-04 Identities = 34/96 (35%), Positives = 43/96 (44%) Frame = -2
Query: 425 LQILGKDGSSWHLVDYKRDGIIIFINDVLQGWSNGVLQAGIHRVVLNXXXXXXXXXXXXX 246 LQ+L KDG W V D ++I I D+ Q WSNGV ++ HRVV N Sbjct: 226 LQLL-KDGK-WIRVKPNPDALVINIGDLFQAWSNGVYKSLEHRVVANHEIERFSFAYFLC 283
Query: 245 XXXXXLIQPACTVDGEYCPPRYRPFSFGKYIEATSE 138 +IQ C P YR FSF +Y + E Sbjct: 284 PSHDTVIQSCCE------PSIYRKFSFREYRQQVEE 313
>tr|B2WHP1|B2WHP1_PYRTR Flavonol synthase/flavanone 3-hydroxylase OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=PTRG_09500 PE=4 SV=1 Length = 367
Score = 47.0 bits (110), Expect = 5e-04 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 6/104 (5%) Frame = -2
Query: 425 LQILGKDGSSWHLVDYKRDGIIIFINDVLQGWSNGVLQAGIHRVVLNXXXXXXXXXXXXX 246 L+IL K WH+ Y + +I+ + D W+NG+ ++ +HRVV Sbjct: 265 LEIL-KPSGQWHITSYIPNSLIVNVADFFMRWTNGLYKSTVHRVVNRSAEARYSVPFFFS 323
Query: 245 XXXXXLIQ--PACTVDGEYCPPRYRPFSFGKYI----EATSEYG 132 +I+ P C DGE +++P G+YI AT+ YG Sbjct: 324 VNYDTVIETLPTCLKDGE--ESKWKPIKAGEYILERVNATTAYG 365
>tr|A5B3E7|A5B3E7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001938 PE=3 SV=1 Length = 342
Score = 46.6 bits (109), Expect = 6e-04 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 1/101 (0%) Frame = -2
Query: 425 LQILGKDGSSWHLVDYKRDGIIIFINDVLQGWSNGVLQAGIHRVVLNXXXXXXXXXXXXX 246 L++ K W V D II + D++Q WSN ++ HRV+LN Sbjct: 228 LEVKRKTDGEWVRVKPTPDAYIINVGDIIQAWSNDTYESVEHRVILNSERERFSIPFFFN 287
Query: 245 XXXXXLIQPACTV-DGEYCPPRYRPFSFGKYIEATSEYGHL 126 +QP + GE P+YR ++ GK+ AT ++G+L Sbjct: 288 PAHHLWVQPLEELTKGE--KPKYRAYNLGKFF-ATRKHGNL 325
>tr|Q5D0G3|Q5D0G3_SPIOL Gibberellin 2-oxidase 3 OS=Spinacia oleracea PE=2 SV=1 Length = 375
Score = 46.2 bits (108), Expect = 8e-04 Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 4/100 (4%) Frame = -2
Query: 416 LGKDGSSWHLVDYKRDGIIIFINDVLQGWSNGVLQAGIHRVVLNXXXXXXXXXXXXXXXX 237 L KDG W V + +I+ I D+ Q WSNGV ++ +HRVV N Sbjct: 272 LVKDGR-WISVKPNPEALIVNIGDLFQAWSNGVYKSVVHRVVANPRFERFSTAYFLCPSG 330
Query: 236 XXLIQPACTVDGEYCPPRYRPFSFGKYIEATS----EYGH 129 +IQ P YR FSFG+Y + E+GH Sbjct: 331 DAVIQSYRE------PSMYRKFSFGEYRQQVQQDVREFGH 364
>tr|A9U436|A9U436_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_155865 PE=4 SV=1 Length = 256
Score = 46.2 bits (108), Expect = 8e-04 Identities = 28/93 (30%), Positives = 45/93 (48%) Frame = -2
Query: 410 KDGSSWHLVDYKRDGIIIFINDVLQGWSNGVLQAGIHRVVLNXXXXXXXXXXXXXXXXXX 231 ++G W VD + D ++IF+ + LQ SNG A HR V+N Sbjct: 162 RNGDKWVTVDPEPDALVIFVGEQLQVASNGRYTAVTHRAVVNKTTDRISIAMGLAPNSKV 221
Query: 230 LIQPACTVDGEYCPPRYRPFSFGKYIEATSEYG 132 L++PA + + PPRY ++G++ AT +G Sbjct: 222 LVRPAPELLEKSSPPRYEARTYGEF-RATVSHG 253
>tr|A9NNT1|A9NNT1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 204
Score = 46.2 bits (108), Expect = 8e-04 Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 2/106 (1%) Frame = -2
Query: 425 LQILGKDGSSWHLVDYKRDGIIIFINDVLQGWSNGVLQAGIHRVVLNXXXXXXXXXXXXX 246 LQ+ KDG W V D +I + D +Q WSN ++ HRVV+N Sbjct: 86 LQVKRKDGE-WIGVKPIPDSFVINVGDCMQVWSNDKYESVEHRVVVNDKKERFSVPFFLY 144
Query: 245 XXXXXLIQPACTVDGEYCPPRYRPFSFGKYI--EATSEYGHLPPEN 114 ++ P E P RYR FS+GK+ + S + +L EN Sbjct: 145 PSHYVMVGPVPDFVNEKNPSRYREFSWGKFFKRKRDSNFKNLGTEN 190
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