DK955690
Clone id TST39A01NGRL0023_M11
Library
Length 570
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_M11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCATCTCCATAGCCGCTTCCT
CGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAGCTTCTCTGGTC
TCAAGGCCACTACCCTGTTCGCCCCCAAGAGCCCCAACCCGCTCGCCATCTCTAATGGCA
GCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGT
CCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAA
AAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCC
ACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCT
GCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTGAAG
CCTTCATCCGCGTGCTGGGCTTTGACGCTAAGAGGCAGGTGCAGGTCTCCGGCTTCCTTG
TCCAGAAAAGCCCCTCTGTCTAAACTTTCT
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 159
Score (bit) 187.0
E-value 3.0e-47
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955690|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_M11, 5'
(570 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 187 3e-47
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 185 2e-46
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 181 2e-45
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 180 5e-45
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 179 9e-45
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 179 9e-45
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 179 9e-45
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch... 179 1e-44
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 178 1e-44
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 178 2e-44
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha... 177 2e-44
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 177 3e-44
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai... 177 4e-44
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 176 6e-44
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai... 176 6e-44
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai... 176 6e-44
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 176 7e-44
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 176 7e-44
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 176 7e-44
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 176 9e-44
sp|P27985|RBS2_BRANA Ribulose bisphosphate carboxylase small cha... 176 9e-44
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 175 1e-43
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 175 1e-43
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai... 175 2e-43
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 175 2e-43
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha... 175 2e-43
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 175 2e-43
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai... 173 5e-43
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha... 173 5e-43
sp|O22077|RBS_FAGCR Ribulose bisphosphate carboxylase small chai... 173 6e-43

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181

Score = 187 bits (475), Expect = 3e-47
Identities = 89/159 (55%), Positives = 111/159 (69%), Gaps = 5/159 (3%)
Frame = +3

Query: 99 LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 266
L+ F+GLK+ F K+ N + SNG RV M VW P KK+ETLSYLPPLS E
Sbjct: 22 LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 267 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 443
++K++D+++R W PC+EF+ + G VYREH H GYYDGRYW MWKLPMFGC D+A V+
Sbjct: 82 ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 444 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKSPSV 560
+E+ EC KEYP AFIRV+GFD RQVQ F+V K P V
Sbjct: 142 KEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKPPGV 180


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
Length = 182

Score = 185 bits (469), Expect = 2e-46
Identities = 90/155 (58%), Positives = 111/155 (71%), Gaps = 5/155 (3%)
Frame = +3

Query: 111 FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 278
F+ LK+T+ F K+ N + SNG RV M VW P KKFETLSYLPPLSSEQ+AK
Sbjct: 28 FTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAK 87

Query: 279 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 455
+VD+++RK PC+EF+ + G VYREH GYYDGRYW MWKLPMFGC D++ VL+E+
Sbjct: 88 EVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELE 147

Query: 456 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKSPSV 560
EC K YP AFIR++GFD KRQVQ+ F+ K P V
Sbjct: 148 ECKKAYPSAFIRIIGFDNKRQVQIISFIAYKPPGV 182


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
PE=1 SV=2
Length = 180

Score = 181 bits (459), Expect = 2e-45
Identities = 85/154 (55%), Positives = 109/154 (70%), Gaps = 5/154 (3%)
Frame = +3

Query: 111 FSGLKATTLFAP--KSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 278
F+GLK++ F K+ N + SNG RV+ M VW P KKFETLSYLP L+ ++AK
Sbjct: 24 FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 279 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 455
+VD+++R W PC+EF+ + G VYREH + GYYDGRYW MWKLP+FGC D+A VL+E+
Sbjct: 84 EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 456 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKSPS 557
EC KEYP AFIR++GFD RQVQ F+ K PS
Sbjct: 144 ECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPPS 177


>sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small chain
2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B
PE=2 SV=2
Length = 181

Score = 180 bits (456), Expect = 5e-45
Identities = 87/154 (56%), Positives = 109/154 (70%), Gaps = 5/154 (3%)
Frame = +3

Query: 111 FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 278
F+GLK++ F K+ N + SNG RVS M VW P KKFETLSYLP LS ++AK
Sbjct: 24 FTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAK 83

Query: 279 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 455
+VD+++R W PC+EF+ + G VYREH + GYYDGRYW MWKLP+FGC D+A VL+E+
Sbjct: 84 EVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 456 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKSPS 557
EC KEYP AFIR++GFD RQVQ F+ K PS
Sbjct: 144 ECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPS 177


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
SV=1
Length = 178

Score = 179 bits (454), Expect = 9e-45
Identities = 83/147 (56%), Positives = 102/147 (69%)
Frame = +3

Query: 108 SFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 287
S + T FA S P SNG RV M VW P KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31 SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 288 FMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAK 467
+++R GW PCIEF K+G VYRE+ + GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K
Sbjct: 88 YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSK 147

Query: 468 EYPEAFIRVLGFDAKRQVQVSGFLVQK 548
YP+ F R++GFD RQVQ FL K
Sbjct: 148 AYPDYFNRIIGFDNTRQVQCISFLTYK 174


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
Length = 177

Score = 179 bits (454), Expect = 9e-45
Identities = 86/150 (57%), Positives = 105/150 (70%), Gaps = 4/150 (2%)
Frame = +3

Query: 111 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 278
F+GL+++ F K+ N L+ SNG RVS M VW P KKFETLSYLPPLS E +AK
Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 279 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 458
+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 459 CAKEYPEAFIRVLGFDAKRQVQVSGFLVQK 548
K YPE F+R++GFD KRQVQ F+ K
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
Length = 177

Score = 179 bits (454), Expect = 9e-45
Identities = 86/150 (57%), Positives = 105/150 (70%), Gaps = 4/150 (2%)
Frame = +3

Query: 111 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 278
F+GL+++ F K+ N L+ SNG RVS M VW P KKFETLSYLPPLS E +AK
Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 279 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 458
+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 459 CAKEYPEAFIRVLGFDAKRQVQVSGFLVQK 548
K YPE F+R++GFD KRQVQ F+ K
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYK 175


>sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small chain
1B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1B
PE=1 SV=1
Length = 181

Score = 179 bits (453), Expect = 1e-44
Identities = 86/154 (55%), Positives = 109/154 (70%), Gaps = 5/154 (3%)
Frame = +3

Query: 111 FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 278
F+GLK++ F K+ N + SNG RVS M VW P KKFETLSYLP L+ ++AK
Sbjct: 24 FTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLTDVELAK 83

Query: 279 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 455
+VD+++R W PC+EF+ + G VYREH + GYYDGRYW MWKLP+FGC D+A VL+E+
Sbjct: 84 EVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 456 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKSPS 557
EC KEYP AFIR++GFD RQVQ F+ K PS
Sbjct: 144 ECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPS 177


>sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small chain
3B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-3B
PE=1 SV=2
Length = 181

Score = 178 bits (452), Expect = 1e-44
Identities = 86/154 (55%), Positives = 106/154 (68%), Gaps = 5/154 (3%)
Frame = +3

Query: 111 FSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 278
F+GLK++ F I SNG RVS M VW P KKFETLSYLP LS ++AK
Sbjct: 24 FTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAK 83

Query: 279 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 455
+VD+++R W PC+EF+ + G VYREH + GYYDGRYW MWKLP+FGC D+A VL+E+
Sbjct: 84 EVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 456 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKSPS 557
EC KEYP AFIR++GFD RQVQ F+ K PS
Sbjct: 144 ECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPS 177


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
Length = 171

Score = 178 bits (451), Expect = 2e-44
Identities = 85/155 (54%), Positives = 107/155 (69%), Gaps = 8/155 (5%)
Frame = +3

Query: 108 SFSGLKATTLFAP--KSPNPLA------ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 263
+F+GLK+T F K N A SNG RV M VW P+ N KFETLSYLP L+
Sbjct: 15 AFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTE 74

Query: 264 EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 443
EQ+ K+V++++R W PC+EFD GS+ R++ GYYDGRYWVMWKLPMFGC +A+ V+
Sbjct: 75 EQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVI 134

Query: 444 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQK 548
E+ ECAK YP+AFIRV+GFD RQVQ F+V K
Sbjct: 135 NEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHK 169


tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 150
Score (bit) 285.0
E-value 2.0e-75
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955690|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_M11, 5'
(570 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 285 2e-75
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 201 3e-50
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 197 3e-49
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 197 4e-49
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 197 4e-49
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 197 4e-49
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 194 3e-48
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 189 7e-47
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 187 3e-46
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 187 4e-46
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 187 4e-46
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 186 1e-45
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c... 184 2e-45
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c... 184 3e-45
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c... 184 3e-45
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c... 183 5e-45
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c... 183 5e-45
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c... 182 9e-45
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c... 182 1e-44
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c... 182 1e-44
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c... 182 1e-44
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c... 181 2e-44
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c... 181 3e-44
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 180 6e-44
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c... 179 7e-44
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c... 179 7e-44
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c... 179 1e-43
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza... 179 1e-43
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c... 179 1e-43
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c... 179 1e-43

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174

Score = 285 bits (728), Expect = 2e-75
Identities = 132/150 (88%), Positives = 143/150 (95%)
Frame = +3

Query: 99 LSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 278
LSKSFSGLKA TLFAPK NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22 LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 279 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 458
QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAE
Sbjct: 82 QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141

Query: 459 CAKEYPEAFIRVLGFDAKRQVQVSGFLVQK 548
CAKEYP AFIRVLGFDAKRQVQV+GFLV+K
Sbjct: 142 CAKEYPTAFIRVLGFDAKRQVQVAGFLVKK 171


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87740 PE=3 SV=1
Length = 179

Score = 201 bits (510), Expect = 3e-50
Identities = 94/151 (62%), Positives = 114/151 (75%), Gaps = 3/151 (1%)
Frame = +3

Query: 105 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 284
K FSGLK+TTLFA K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 27 KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 285 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 455
DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLREI
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 456 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQK 548
EC + +P ++RVLGFD+K+QVQ+ GFLV +
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVAR 177


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87752 PE=3 SV=1
Length = 179

Score = 197 bits (502), Expect = 3e-49
Identities = 93/151 (61%), Positives = 113/151 (74%), Gaps = 3/151 (1%)
Frame = +3

Query: 105 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 284
K FSGLK+TTL A K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 27 KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 285 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 455
DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLREI
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 456 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQK 548
EC + +P ++RVLGFD+K+QVQ+ GFLV +
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVAR 177


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
Length = 214

Score = 197 bits (500), Expect = 4e-49
Identities = 90/151 (59%), Positives = 114/151 (75%), Gaps = 3/151 (1%)
Frame = +3

Query: 105 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 284
K+FSGLK+ TLF+ K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 62 KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 285 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 455
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 456 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQK 548
EC ++P ++RVLGFD+K+QVQ+ GFLV +
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSR 212


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
PE=2 SV=1
Length = 184

Score = 197 bits (500), Expect = 4e-49
Identities = 91/151 (60%), Positives = 112/151 (74%), Gaps = 3/151 (1%)
Frame = +3

Query: 105 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 284
K+FSGLK+ TLF KS ++ NGSRV M VW P KFET SYLPPLS +QIA+QV
Sbjct: 32 KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 285 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 455
D+M+++ PCIEFD +G+V R +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 92 DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 456 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQK 548
EC YP ++RVLGFD+K+QVQ+ GFLV +
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFLVAR 182


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_221004 PE=3 SV=1
Length = 184

Score = 197 bits (500), Expect = 4e-49
Identities = 91/151 (60%), Positives = 113/151 (74%), Gaps = 3/151 (1%)
Frame = +3

Query: 105 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 284
K+FSGLK TLF+ K+ A+ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 32 KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 285 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 455
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 92 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 456 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQK 548
EC ++P ++RVLGFD+K+QVQ+ GFLV +
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSR 182


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_225236 PE=3 SV=1
Length = 183

Score = 194 bits (493), Expect = 3e-48
Identities = 88/151 (58%), Positives = 114/151 (75%), Gaps = 3/151 (1%)
Frame = +3

Query: 105 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 284
K+FSGLK+ TLF+ ++ ++ NGSRV M VW P KFET SYLPPL+ ++IAKQV
Sbjct: 31 KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 285 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 455
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 91 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 456 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQK 548
EC ++P ++RVLGFD+K+QVQ+ GFLV +
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFLVSR 181


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
chain OS=Lactuca sativa PE=2 SV=1
Length = 181

Score = 189 bits (481), Expect = 7e-47
Identities = 89/159 (55%), Positives = 112/159 (70%), Gaps = 5/159 (3%)
Frame = +3

Query: 99 LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 266
L+ F+GLK+ F K+ N + SNG RV M VW P KK+ETLSYLPPLS E
Sbjct: 22 LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 267 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 443
++K++D+++R W PC+EF+ + G VYREH H GYYDGRYW MWKLPMFGC D+A V+
Sbjct: 82 ALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 444 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKSPSV 560
+E+ EC KEYP AFIRV+GFD+ RQVQ F+V K P V
Sbjct: 142 KEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKPPGV 180


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_115069 PE=3 SV=1
Length = 181

Score = 187 bits (476), Expect = 3e-46
Identities = 86/148 (58%), Positives = 107/148 (72%)
Frame = +3

Query: 105 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 284
K+FSGLK+ T+F+ K+ N ++ NGSRV M VW P KFET SYLPPLS + IAKQV
Sbjct: 32 KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 285 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 464
++M+++ PC+EFD V R + GYYDGRYW MWKLPMFGCQD+A VLREI EC
Sbjct: 92 EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 465 KEYPEAFIRVLGFDAKRQVQVSGFLVQK 548
K +P F+RVLGFD +QVQ+ GFLV +
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVAR 179


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_146969 PE=3 SV=1
Length = 181

Score = 187 bits (475), Expect = 4e-46
Identities = 87/148 (58%), Positives = 107/148 (72%)
Frame = +3

Query: 105 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 284
K+FSGLK++TLF+ K+ + ++ NGSRV M VW P KFET SYLPPLS + IAKQV
Sbjct: 32 KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 285 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 464
D+M+++ PC+EFD V R + GYYDGRYW MWKLPMFGCQD A VLREI EC
Sbjct: 92 DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151

Query: 465 KEYPEAFIRVLGFDAKRQVQVSGFLVQK 548
K +P F+RVLGFD +QVQ+ GFLV +
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVAR 179