DK955697 |
Clone id |
TST39A01NGRL0023_M18 |
Library |
TST39 |
Length |
507 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_M18. 5' end sequence. |
Accession |
DK955697 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CGTCCACTAGCAGCACAGACACCATGAGGAAGGAGTTCGCATTCAAGAAGGAGTTTCCCT TCGAGGAGAGGACTGCTCAGGCCTGCCGCATGCCAGAGAAGTATCCTGACAGAGTCCCGG TGATTGTTGAGAAGGCTTCTAGAACAGATATGCCAGATATGGAAAAGAAGAAGTTCCTTG TTCCAGAGGATTTGACAGTGGGCCAATTTGTGTATATAATTGGAAGAAGGCTCCACCTGA CCCCTGGCCAGGCATTGTTTATATTTGTGGGGAATGTACTGCCACCTATCACTGCTTTGA TGTCGTCCATCTACAAGGAGCACAAGGACGAGGACGTTTTTTTGTATGTTCATTACAGTG GTGAGAAGACATTCGGCTAGATGGATAAAGCATGCTGGGCGGGTGTACAGTTGTGTTTAG CTCTTTTGGAAGGCTCTTTGTTTGGATCATGTTTGCTGATACTGACAATTCCCCGAGGGG ACATCAATCCAAAAGTCTTACCACTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SL04 |
Definition |
sp|Q9SL04|ATG8D_ARATH Autophagy-related protein 8d OS=Arabidopsis thaliana |
Align length |
103 |
Score (bit) |
149.0 |
E-value |
6.0e-36 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A8JB85 |
Definition |
tr|A8JB85|A8JB85_CHLRE Autophagy protein OS=Chlamydomonas reinhardtii |
Align length |
124 |
Score (bit) |
157.0 |
E-value |
4.0e-37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955697|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_M18, 5' (507 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A8JB85|A8JB85_CHLRE Autophagy protein OS=Chlamydomonas reinha... 157 4e-37 tr|Q1WLV8|Q1WLV8_CHLIN Microtubule-associated protein-related pr... 155 8e-37 tr|A9NX35|A9NX35_PICSI Putative uncharacterized protein OS=Picea... 149 6e-35 tr|A7PX30|A7PX30_VITVI Chromosome chr12 scaffold_36, whole genom... 149 1e-34 tr|A8NGU7|A8NGU7_COPC7 Putative uncharacterized protein OS=Copri... 148 2e-34 tr|A9RSQ9|A9RSQ9_PHYPA Predicted protein OS=Physcomitrella paten... 147 2e-34 tr|A7P0P2|A7P0P2_VITVI Chromosome chr19 scaffold_4, whole genome... 147 2e-34 tr|A9NS23|A9NS23_PICSI Putative uncharacterized protein OS=Picea... 147 3e-34 tr|A9TDL1|A9TDL1_PHYPA Predicted protein OS=Physcomitrella paten... 147 4e-34 tr|B7FH53|B7FH53_MEDTR Putative uncharacterized protein OS=Medic... 146 6e-34 tr|Q01KB9|Q01KB9_ORYSA H0215F08.11 protein OS=Oryza sativa GN=H0... 145 1e-33 tr|B8BBF8|B8BBF8_ORYSI Putative uncharacterized protein OS=Oryza... 145 1e-33 tr|B7F704|B7F704_ORYSJ cDNA clone:J023105G11, full insert sequen... 145 1e-33 tr|B7E7M3|B7E7M3_ORYSJ cDNA clone:001-046-G05, full insert seque... 145 1e-33 tr|B6U3J5|B6U3J5_MAIZE Autophagy-related 8d variant 1 OS=Zea may... 145 1e-33 tr|B6SUL0|B6SUL0_MAIZE Autophagy-related 8b variant 1 OS=Zea may... 145 1e-33 tr|B6SH45|B6SH45_MAIZE Autophagy-related 8e variant 1 OS=Zea may... 145 1e-33 tr|A9PEE2|A9PEE2_POPTR Putative uncharacterized protein OS=Popul... 145 1e-33 tr|A3BQD5|A3BQD5_ORYSJ Putative uncharacterized protein OS=Oryza... 145 1e-33 tr|Q8L5F9|Q8L5F9_CICAR Microtubule associated protein OS=Cicer a... 144 2e-33 tr|A9TK80|A9TK80_PHYPA Predicted protein OS=Physcomitrella paten... 144 2e-33 tr|A9TDL6|A9TDL6_PHYPA Predicted protein (Fragment) OS=Physcomit... 144 2e-33 tr|A9TDL2|A9TDL2_PHYPA Predicted protein OS=Physcomitrella paten... 144 2e-33 tr|A9PID1|A9PID1_POPTR Putative uncharacterized protein OS=Popul... 144 2e-33 tr|B6SIF1|B6SIF1_MAIZE Autophagy-related 8a variant 1 OS=Zea may... 143 4e-33 tr|A9TK81|A9TK81_PHYPA Predicted protein (Fragment) OS=Physcomit... 143 4e-33 tr|A8MS84|A8MS84_ARATH Uncharacterized protein At4g21980.2 OS=Ar... 143 4e-33 tr|Q6W5F3|Q6W5F3_GOSHI Microtubule-associated protein 1 light ch... 143 5e-33 tr|A9PJ79|A9PJ79_POPJC Putative uncharacterized protein OS=Popul... 143 5e-33 tr|Q710Q4|Q710Q4_ORYSA Putative microtubule-associated protein (... 142 7e-33
>tr|A8JB85|A8JB85_CHLRE Autophagy protein OS=Chlamydomonas reinhardtii GN=APG8 PE=3 SV=1 Length = 134
Score = 157 bits (396), Expect = 4e-37 Identities = 79/124 (63%), Positives = 98/124 (79%) Frame = +3
Query: 69 RTAQACRMPEKYPDRVPVIVEKASRTDMPDMEKKKFLVPEDLTVGQFVYIIGRRLHLTPG 248 R A+A R+ EKYPDR+PVIVEKA R+D+PD++KKK+LVP DLTVGQFVY+I +R+ L+P Sbjct: 18 RKAEAARIKEKYPDRIPVIVEKAERSDIPDIDKKKYLVPSDLTVGQFVYVIRKRIKLSPE 77
Query: 249 QALFIFVGNVLPPITALMSSIYKEHKDEDVFLYVHYSGEKTFG*MDKACWAGVQLCLALL 428 +A+FIFV NVLPP ALMSSIY++HKDED FLY+ YSGE TFG AG QL L + Sbjct: 78 KAIFIFVKNVLPPTAALMSSIYEDHKDEDGFLYITYSGENTFG-------AGEQLQLPVE 130
Query: 429 EGSL 440 E +L Sbjct: 131 ELAL 134
>tr|Q1WLV8|Q1WLV8_CHLIN Microtubule-associated protein-related protein OS=Chlamydomonas incerta PE=2 SV=1 Length = 135
Score = 155 bits (393), Expect = 8e-37 Identities = 72/103 (69%), Positives = 89/103 (86%) Frame = +3
Query: 69 RTAQACRMPEKYPDRVPVIVEKASRTDMPDMEKKKFLVPEDLTVGQFVYIIGRRLHLTPG 248 R A+A R+ EKYPDR+PVIVEKA R+D+PD++KKK+LVP DLTVGQFVY+I +R+ L+P Sbjct: 18 RKAEAARIKEKYPDRIPVIVEKAERSDIPDIDKKKYLVPSDLTVGQFVYVIRKRIKLSPE 77
Query: 249 QALFIFVGNVLPPITALMSSIYKEHKDEDVFLYVHYSGEKTFG 377 +A+FIFV NVLPP ALMSSIY++HKDED FLY+ YSGE TFG Sbjct: 78 KAIFIFVKNVLPPTAALMSSIYEDHKDEDGFLYITYSGENTFG 120
>tr|A9NX35|A9NX35_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 128
Score = 149 bits (377), Expect = 6e-35 Identities = 70/103 (67%), Positives = 87/103 (84%) Frame = +3
Query: 69 RTAQACRMPEKYPDRVPVIVEKASRTDMPDMEKKKFLVPEDLTVGQFVYIIGRRLHLTPG 248 R A+A R+ +KYPDR+PVIVEKA R+D+P+++KKK+LVP DLTVGQFVY+I +R+ L+ Sbjct: 15 RKAEAARIRDKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAE 74
Query: 249 QALFIFVGNVLPPITALMSSIYKEHKDEDVFLYVHYSGEKTFG 377 +A+FIFV NVLPP A+MSSIY EHKDED FLYV YSGE TFG Sbjct: 75 KAIFIFVNNVLPPTAAIMSSIYDEHKDEDGFLYVTYSGENTFG 117
>tr|A7PX30|A7PX30_VITVI Chromosome chr12 scaffold_36, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025878001 PE=3 SV=1 Length = 121
Score = 149 bits (375), Expect = 1e-34 Identities = 66/103 (64%), Positives = 89/103 (86%) Frame = +3
Query: 69 RTAQACRMPEKYPDRVPVIVEKASRTDMPDMEKKKFLVPEDLTVGQFVYIIGRRLHLTPG 248 R A+A R+ EKYPDR+PVIVE+A ++D+PD++KKK+LVP DLTVGQFVY++ +R+ LTP Sbjct: 15 RQAEAARIREKYPDRIPVIVERAEKSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLTPE 74
Query: 249 QALFIFVGNVLPPITALMSSIYKEHKDEDVFLYVHYSGEKTFG 377 +A+FIF+ N+LPP A+MS+IY+E+KDED FLY+ YSGE TFG Sbjct: 75 KAIFIFIKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 117
>tr|A8NGU7|A8NGU7_COPC7 Putative uncharacterized protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_03820 PE=3 SV=1 Length = 127
Score = 148 bits (373), Expect = 2e-34 Identities = 70/103 (67%), Positives = 85/103 (82%) Frame = +3
Query: 69 RTAQACRMPEKYPDRVPVIVEKASRTDMPDMEKKKFLVPEDLTVGQFVYIIGRRLHLTPG 248 R A+A R+ +KYPDR+PVI EKA RTD+P ++KKK+LVP DLTVGQFVY+I +R+ L P Sbjct: 14 RKAEAERIRQKYPDRIPVICEKADRTDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPE 73
Query: 249 QALFIFVGNVLPPITALMSSIYKEHKDEDVFLYVHYSGEKTFG 377 +A+FIFV VLPP ALMS+IY+EHKDED FLYV YSGE TFG Sbjct: 74 KAIFIFVDEVLPPTAALMSAIYEEHKDEDNFLYVSYSGENTFG 116
>tr|A9RSQ9|A9RSQ9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_205266 PE=3 SV=1 Length = 122
Score = 147 bits (372), Expect = 2e-34 Identities = 69/103 (66%), Positives = 86/103 (83%) Frame = +3
Query: 69 RTAQACRMPEKYPDRVPVIVEKASRTDMPDMEKKKFLVPEDLTVGQFVYIIGRRLHLTPG 248 R A+A R+ +KYPDR+PVIVEKA ++D+PD++KKK+LVP DLTVGQFVY+I +R+ L+ Sbjct: 15 RQAEAARIRDKYPDRIPVIVEKAEKSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSSE 74
Query: 249 QALFIFVGNVLPPITALMSSIYKEHKDEDVFLYVHYSGEKTFG 377 +A+FIFV NVLPP A+MSSIY EHKDED FLY YSGE TFG Sbjct: 75 KAIFIFVKNVLPPTAAMMSSIYDEHKDEDGFLYFTYSGENTFG 117
>tr|A7P0P2|A7P0P2_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027309001 PE=3 SV=1 Length = 119
Score = 147 bits (372), Expect = 2e-34 Identities = 69/103 (66%), Positives = 88/103 (85%) Frame = +3
Query: 69 RTAQACRMPEKYPDRVPVIVEKASRTDMPDMEKKKFLVPEDLTVGQFVYIIGRRLHLTPG 248 R A+A R+ EKYPDR+PVIVEKA R+D+PD++KKK+LVP DLTVGQFVY+I +R+ L+ Sbjct: 15 RQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSAE 74
Query: 249 QALFIFVGNVLPPITALMSSIYKEHKDEDVFLYVHYSGEKTFG 377 +A+FIFV NVLPP A+MS+IY+E+KDED FLY+ YSGE TFG Sbjct: 75 KAIFIFVKNVLPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 117
>tr|A9NS23|A9NS23_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 129
Score = 147 bits (371), Expect = 3e-34 Identities = 69/108 (63%), Positives = 89/108 (82%) Frame = +3
Query: 69 RTAQACRMPEKYPDRVPVIVEKASRTDMPDMEKKKFLVPEDLTVGQFVYIIGRRLHLTPG 248 R A+A R+ +KYPDR+P IVEKA ++D+PD++KKK+LVP DLTVGQFVY+I +R+ L+ Sbjct: 15 RQAEAGRIRDKYPDRIPAIVEKAEKSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSAE 74
Query: 249 QALFIFVGNVLPPITALMSSIYKEHKDEDVFLYVHYSGEKTFG*MDKA 392 +A+FIFV NVLPP ALMSS+Y+EHKDED FLY YSGE TFG ++A Sbjct: 75 KAIFIFVNNVLPPTAALMSSVYEEHKDEDGFLYFTYSGENTFGQTNEA 122
>tr|A9TDL1|A9TDL1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_193990 PE=3 SV=1 Length = 122
Score = 147 bits (370), Expect = 4e-34 Identities = 68/103 (66%), Positives = 86/103 (83%) Frame = +3
Query: 69 RTAQACRMPEKYPDRVPVIVEKASRTDMPDMEKKKFLVPEDLTVGQFVYIIGRRLHLTPG 248 R A+A R+ +KYPDR+PVIVEKA ++D+PD++KKK+LVP DLTVGQFVY+I +R+ L+ Sbjct: 15 RQAEASRIRDKYPDRIPVIVEKAEKSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSSE 74
Query: 249 QALFIFVGNVLPPITALMSSIYKEHKDEDVFLYVHYSGEKTFG 377 +A+FIFV NVLPP A+MSS+Y EHKDED FLY YSGE TFG Sbjct: 75 KAIFIFVKNVLPPTAAMMSSVYDEHKDEDGFLYFTYSGENTFG 117
>tr|B7FH53|B7FH53_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1 Length = 120
Score = 146 bits (368), Expect = 6e-34 Identities = 65/103 (63%), Positives = 88/103 (85%) Frame = +3
Query: 69 RTAQACRMPEKYPDRVPVIVEKASRTDMPDMEKKKFLVPEDLTVGQFVYIIGRRLHLTPG 248 R A+A R+ EKYPDR+PVIVE+A ++D+PD++KKK+LVP DLTVGQFVY++ +R+ L+P Sbjct: 15 RQAEAARIREKYPDRIPVIVERAEKSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPE 74
Query: 249 QALFIFVGNVLPPITALMSSIYKEHKDEDVFLYVHYSGEKTFG 377 +A+FIFV N+LPP +MS+IY+E+KDED FLY+ YSGE TFG Sbjct: 75 KAIFIFVKNILPPTAGMMSAIYEENKDEDGFLYMTYSGENTFG 117
|