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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955699
Clone id TST39A01NGRL0023_M20
Library
Length 607
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_M20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CACAATGAGAAGTAACCAAATAGTAAGACGAGGAATCGTAAGAGGATTTATGATCGATGG
TATTGCCGATGAAAGTTGAGGTTTCTGTCTTCAAAAATGCTGAGAGGGCTGTTCAATCAG
GCTAGGTCGAGGAAGCTGCCAGTCTGCACAGAGCAAGCCCTAACGTACCGCTGCATATAC
GAGCCTACGATTGCTACTAATGCTAATTGCAACCATTGGCATCAGTCGACAGCAGCAAGC
GCTCTTTGCACACCGCCCGCCATATGTCTCCACAATGTCTTCCACTCATGTTCCAACGTA
GATCACTCTACTCGGAAAAGTAACTATTTTGTGGATCCATCTAGTGTTCTCACACTTGGG
AAAGCAGGCAAGACATATTCAAGCTCCAGCAATGTCAAAGAATCAAGAAGTGAAAGTGAA
GGGGAAACCAACCCAAAGGATGCGAGTACACAGCCTGATAATCATGAAGAGATGGTCGGT
TCCGGAGCGGACGTAGAGGTGCCACCATTTGGTAAAGGGAATTGCGACAAGCCCAACAAG
AATATGATGGGGAATATGAAGAGATGTTCATATGTGCTGGTTTGCAGGGGGGTGCAGTCC
ACCTAGT
■■Homology search results ■■ -
sp_hit_id Q8VE08
Definition sp|Q8VE08|FBX33_MOUSE F-box only protein 33 OS=Mus musculus
Align length 127
Score (bit) 34.3
E-value 0.51
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955699|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_M20, 5'
         (607 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8VE08|FBX33_MOUSE F-box only protein 33 OS=Mus musculus GN=F...    34   0.51 
sp|Q9V3I5|JIL1_DROME Chromosomal serine/threonine-protein kinase...    33   1.5  
sp|Q9Z1L0|PK3CB_RAT Phosphatidylinositol-4,5-bisphosphate 3-kina...    31   4.3  
sp|Q8BTI9|PK3CB_MOUSE Phosphatidylinositol-4,5-bisphosphate 3-ki...    31   4.3  
sp|P42338|PK3CB_HUMAN Phosphatidylinositol-4,5-bisphosphate 3-ki...    30   7.4  
sp|A1JPA1|MDTK_YERE8 Multidrug resistance protein mdtK OS=Yersin...    30   7.4  

>sp|Q8VE08|FBX33_MOUSE F-box only protein 33 OS=Mus musculus
           GN=Fbxo33 PE=1 SV=2
          Length = 562

 Score = 34.3 bits (77), Expect = 0.51
 Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 21/127 (16%)
 Frame = +1

Query: 16  PNSKTRNRKRIYDRWYCR*KLRFLSSKMLRGLFNQARSR---------KLPVCTEQA--- 159
           P ++TR       RW  R +LR L  + LRGL    R R         ++ +C + A   
Sbjct: 13  PGARTRAGAARLVRWRRRQRLRLLQLRRLRGLLRGLRRRPGTGGRRPSRMALCGQAAGAA 72

Query: 160 ------LTYRCIYEPT---IATNANCNHWHQSTAASALCTPPAICLHNVFHSCSNVDHST 312
                 + +   + P    +  +A+C+HW +     AL     ICL         ++   
Sbjct: 73  SLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICLRVSPAEQPRLEFLM 132

Query: 313 RKSNYFV 333
           RK  +FV
Sbjct: 133 RKCGWFV 139


>sp|Q9V3I5|JIL1_DROME Chromosomal serine/threonine-protein kinase
           JIL-1 OS=Drosophila melanogaster GN=JIL-1 PE=1 SV=1
          Length = 1207

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = -1

Query: 595 APPCKPAHMNISSYSPSYSCWACRNSLYQMVAPLRPLRNRPSLHDYQAVYSHPL 434
           APP   A  N+ +YSP+   +    +LY M+   RP R      D+ A   H L
Sbjct: 783 APPEMLADANLVTYSPAVDIYGLGATLYTMLVGHRPYRQNEDDVDHSAAAHHEL 836


>sp|Q9Z1L0|PK3CB_RAT Phosphatidylinositol-4,5-bisphosphate 3-kinase
           catalytic subunit beta isoform OS=Rattus norvegicus
           GN=Pik3cb PE=2 SV=1
          Length = 1070

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
 Frame = +1

Query: 310 TRKSNYFVDPSSVLTLGKAGKTYXXXXXXXXXXXXXXGETNPKDA-----STQPDNHEEM 474
           T+KS   ++PS   T+ KAGK +              G+    D      S+ PD  EEM
Sbjct: 413 TKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQLRSGDVILHSWSSFPDELEEM 472

Query: 475 VGSGADVEVPPFGK 516
           +     V+  P+ +
Sbjct: 473 LNPMGTVQTNPYAE 486


>sp|Q8BTI9|PK3CB_MOUSE Phosphatidylinositol-4,5-bisphosphate
           3-kinase catalytic subunit beta isoform OS=Mus musculus
           GN=Pik3cb PE=2 SV=1
          Length = 1064

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
 Frame = +1

Query: 310 TRKSNYFVDPSSVLTLGKAGKTYXXXXXXXXXXXXXXGETNPKDA-----STQPDNHEEM 474
           T+KS   ++PS   T+ KAGK +              G+    D      S+ PD  EEM
Sbjct: 407 TKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQLRSGDVILHSWSSFPDELEEM 466

Query: 475 VGSGADVEVPPFGK 516
           +     V+  P+ +
Sbjct: 467 LNPMGTVQTNPYAE 480


>sp|P42338|PK3CB_HUMAN Phosphatidylinositol-4,5-bisphosphate
           3-kinase catalytic subunit beta isoform OS=Homo sapiens
           GN=PIK3CB PE=1 SV=1
          Length = 1070

 Score = 30.4 bits (67), Expect = 7.4
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
 Frame = +1

Query: 310 TRKSNYFVDPSSVLTLGKAGKTYXXXXXXXXXXXXXXGETNPKDA-----STQPDNHEEM 474
           T+KS   ++PS   T+ KAGK +              G+    D      S+ PD  EEM
Sbjct: 413 TKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQLRTGDIILHSWSSFPDELEEM 472

Query: 475 VGSGADVEVPPF 510
           +     V+  P+
Sbjct: 473 LNPMGTVQTNPY 484


>sp|A1JPA1|MDTK_YERE8 Multidrug resistance protein mdtK OS=Yersinia
           enterocolitica serotype O:8 / biotype 1B (strain 8081)
           GN=mdtK PE=3 SV=1
          Length = 457

 Score = 30.4 bits (67), Expect = 7.4
 Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = +2

Query: 119 RLGRGSCQSAQSKP*RTAAYTSLRLLLMLIATIGI----SRQQQALFAHRPPYVSTMSS 283
           RLG+GS   A     R AAYTS+ + LML     I     R+  AL  ++ P V  M+S
Sbjct: 302 RLGQGSVDDA-----RVAAYTSIAVGLMLACVTAIFTVVFREHIALLYNKTPEVVVMAS 355
tr_hit_id B6ACU1
Definition tr|B6ACU1|B6ACU1_9CRYT Pyrroline-5-carboxylate reductase family protein OS=Cryptosporidium muris RN66
Align length 35
Score (bit) 33.5
E-value 9.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955699|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_M20, 5'
         (607 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6ACU1|B6ACU1_9CRYT Pyrroline-5-carboxylate reductase family ...    33   9.8  
tr|Q59WC5|Q59WC5_CANAL Potential p-nitrophenyl phosphatase OS=Ca...    33   9.8  

>tr|B6ACU1|B6ACU1_9CRYT Pyrroline-5-carboxylate reductase family
           protein OS=Cryptosporidium muris RN66 GN=CMU_016970 PE=4
           SV=1
          Length = 289

 Score = 33.5 bits (75), Expect = 9.8
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = -2

Query: 303 IYVGT*VEDIVETYGGRCAKSACCCRLMPMVAISI 199
           +  G  ++DI+ET+GG   K+  C R+MP +AIS+
Sbjct: 106 VCAGITIDDIIETFGGN--KNLYCVRVMPNMAISV 138


>tr|Q59WC5|Q59WC5_CANAL Potential p-nitrophenyl phosphatase
           OS=Candida albicans GN=PHO15 PE=4 SV=1
          Length = 308

 Score = 33.5 bits (75), Expect = 9.8
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
 Frame = +1

Query: 445 STQPDNHEEMVGSGADVEVPPFGKGN-----CDKPNKNMMGNMK 561
           ST P N + ++G+G+ +E   F  G      C KPN++MM ++K
Sbjct: 194 STFPANGKLLIGAGSIIETVSFASGRQPEAICGKPNQSMMNSIK 237