DK955714 |
Clone id |
TST39A01NGRL0023_N11 |
Library |
TST39 |
Length |
538 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_N11. 5' end sequence. |
Accession |
DK955714 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL168Contig1 |
Sequence |
AGCGCGTTTCTGCAACTATGGCGGATGTGGAGGAGACGGGGGCTGGAGTGCAGCCGAAGA AGAGAACGTTTAAGAAGTTCTCCTTTCGAGGGGTGGATCTCGATGCCCTCCTTGACATGA CATCTGATGAGCTGGTCGAGCTCTTTCATTCCCGTGCGCGCCGAAGGTTTCAGCGGGGCT TGAAGAGAAAGCCCATGGCTTTGATTAAGAAGCTTCGCAAGGCGAAAAGGGAAGCACCTG CGGGGGAGAAGCCGGAGCCTGTGAGAACTCACTTAAGGAACATGATCATTGTGCCTGAGA TGATCGGTAGCATTATTGGCGTGTATAATGGAAAGACATTCAACCAAGTTGAAATCAAGC CTGAAATGATTGGCCACTACTTGGGAGAGTTTTCCATCAGCTACAAGCCTGTGAAGCATG GAAGGCCCGGCATTGGTGCCACCCACTCTTCTCGGTTTATTCCACTGAAGTAGTTTCTGA TGGTGGCTATGAATTGTGGAGGCTTGGAGAATTATTGACACCTTCTGCTAATCAAGAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O65059 |
Definition |
sp|O65059|RS15_PICMA 40S ribosomal protein S15 OS=Picea mariana |
Align length |
151 |
Score (bit) |
277.0 |
E-value |
2.0e-74 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NK76 |
Definition |
tr|A9NK76|A9NK76_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
151 |
Score (bit) |
277.0 |
E-value |
2.0e-73 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955714|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_N11, 5' (538 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NK76|A9NK76_PICSI Putative uncharacterized protein OS=Picea... 277 2e-73 tr|A9S4A4|A9S4A4_PHYPA Predicted protein OS=Physcomitrella paten... 276 6e-73 tr|A7NX09|A7NX09_VITVI Chromosome chr5 scaffold_2, whole genome ... 275 1e-72 tr|A9SLM1|A9SLM1_PHYPA Predicted protein (Fragment) OS=Physcomit... 274 2e-72 tr|A2YIV1|A2YIV1_ORYSI Putative uncharacterized protein OS=Oryza... 274 2e-72 tr|A9PCZ0|A9PCZ0_POPTR Putative uncharacterized protein OS=Popul... 272 7e-72 tr|A9P8I7|A9P8I7_POPTR Putative uncharacterized protein OS=Popul... 272 7e-72 tr|A3BH94|A3BH94_ORYSJ Putative uncharacterized protein OS=Oryza... 272 7e-72 tr|A9TG45|A9TG45_PHYPA Predicted protein OS=Physcomitrella paten... 272 9e-72 tr|B3TLS1|B3TLS1_ELAGV 40S ribosomal protein S15 OS=Elaeis guine... 271 2e-71 tr|A9PAQ1|A9PAQ1_POPTR Putative uncharacterized protein OS=Popul... 271 2e-71 tr|B6DRE3|B6DRE3_9LAMI 40S ribosomal protein S15-like protein OS... 268 1e-70 tr|Q851P5|Q851P5_ORYSJ Os03g0798600 protein OS=Oryza sativa subs... 268 1e-70 tr|A6MZB5|A6MZB5_ORYSI 40S ribosomal protein S15 OS=Oryza sativa... 268 1e-70 tr|A9NNI7|A9NNI7_PICSI Putative uncharacterized protein OS=Picea... 266 5e-70 tr|B6SII7|B6SII7_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 265 1e-69 tr|Q8W538|Q8W538_9FABA Ribosomal S15 protein (Fragment) OS=Retam... 264 2e-69 tr|B6UDY1|B6UDY1_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 263 3e-69 tr|A9T4N2|A9T4N2_PHYPA Predicted protein OS=Physcomitrella paten... 263 4e-69 tr|Q2V999|Q2V999_SOLTU 40S ribosomal protein S15-like OS=Solanum... 262 9e-69 tr|B6UGP9|B6UGP9_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 262 9e-69 tr|B6SII4|B6SII4_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 261 1e-68 tr|B6T6W2|B6T6W2_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 261 2e-68 tr|Q2XTB6|Q2XTB6_SOLTU 40S ribosomal protein S15-like OS=Solanum... 259 8e-68 tr|Q2V4R0|Q2V4R0_ARATH Uncharacterized protein At1g04270.2 OS=Ar... 259 8e-68 tr|B6T379|B6T379_MAIZE 40S ribosomal protein S15 OS=Zea mays PE=... 258 1e-67 tr|A3ANN4|A3ANN4_ORYSJ Putative uncharacterized protein OS=Oryza... 258 1e-67 tr|A2XMY4|A2XMY4_ORYSI Putative uncharacterized protein OS=Oryza... 256 7e-67 tr|Q0WSM9|Q0WSM9_ARATH Ribosomal protein S15-like OS=Arabidopsis... 254 2e-66 tr|Q0PXY4|Q0PXY4_DIACI Putative ribosomal protein S15 OS=Diaphor... 251 1e-65
>tr|A9NK76|A9NK76_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 151
Score = 277 bits (709), Expect = 2e-73 Identities = 137/151 (90%), Positives = 144/151 (95%) Frame = +3
Query: 18 MADVEETGAGVQPKKRTFKKFSFRGVDLDALLDMTSDELVELFHSRARRRFQRGLKRKPM 197 MAD + VQPKKRTFKKFS+RGVDLDALLDMTS+ELV+LFH+RARRRFQRGLKR+PM Sbjct: 1 MADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARARRRFQRGLKRQPM 60
Query: 198 ALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 377 ALIKKLRKAKREAP+GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH Sbjct: 61 ALIKKLRKAKREAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 120
Query: 378 YLGEFSISYKPVKHGRPGIGATHSSRFIPLK 470 YL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 121 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
>tr|A9S4A4|A9S4A4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181118 PE=3 SV=1 Length = 150
Score = 276 bits (705), Expect = 6e-73 Identities = 138/151 (91%), Positives = 142/151 (94%) Frame = +3
Query: 18 MADVEETGAGVQPKKRTFKKFSFRGVDLDALLDMTSDELVELFHSRARRRFQRGLKRKPM 197 MAD E QPKKRTFKKF+FRGVDLDALLDM+ DELVELFH+RARRRFQRGLKRKPM Sbjct: 1 MADAAEVEIA-QPKKRTFKKFTFRGVDLDALLDMSMDELVELFHARARRRFQRGLKRKPM 59
Query: 198 ALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 377 ALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMIGH Sbjct: 60 ALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGH 119
Query: 378 YLGEFSISYKPVKHGRPGIGATHSSRFIPLK 470 YL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 120 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 150
>tr|A7NX09|A7NX09_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020133001 PE=3 SV=1 Length = 185
Score = 275 bits (703), Expect = 1e-72 Identities = 138/150 (92%), Positives = 142/150 (94%) Frame = +3
Query: 21 ADVEETGAGVQPKKRTFKKFSFRGVDLDALLDMTSDELVELFHSRARRRFQRGLKRKPMA 200 ADVE A PKKRTFKKFSFRGVDLDALLDM++DELV+LFH+RARRRFQRGLKRKPMA Sbjct: 36 ADVEVDVAPGVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFHARARRRFQRGLKRKPMA 95
Query: 201 LIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHY 380 LIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHY Sbjct: 96 LIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHY 155
Query: 381 LGEFSISYKPVKHGRPGIGATHSSRFIPLK 470 L EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 156 LAEFSISYKPVKHGRPGIGATHSSRFIPLK 185
>tr|A9SLM1|A9SLM1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_131980 PE=3 SV=1 Length = 146
Score = 274 bits (701), Expect = 2e-72 Identities = 134/140 (95%), Positives = 138/140 (98%) Frame = +3
Query: 51 QPKKRTFKKFSFRGVDLDALLDMTSDELVELFHSRARRRFQRGLKRKPMALIKKLRKAKR 230 QPKKRTFKKF+FRGVDLDALLDM+ DELVELFH+RARRRFQRGLKRKPMALIKKLRKAKR Sbjct: 7 QPKKRTFKKFTFRGVDLDALLDMSMDELVELFHARARRRFQRGLKRKPMALIKKLRKAKR 66
Query: 231 EAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKP 410 EAPAGEKPEPVRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMIGHYL EFSISYKP Sbjct: 67 EAPAGEKPEPVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKP 126
Query: 411 VKHGRPGIGATHSSRFIPLK 470 VKHGRPGIGATHSSRFIPLK Sbjct: 127 VKHGRPGIGATHSSRFIPLK 146
>tr|A2YIV1|A2YIV1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25153 PE=3 SV=1 Length = 154
Score = 274 bits (700), Expect = 2e-72 Identities = 135/154 (87%), Positives = 146/154 (94%), Gaps = 3/154 (1%) Frame = +3
Query: 18 MADVE---ETGAGVQPKKRTFKKFSFRGVDLDALLDMTSDELVELFHSRARRRFQRGLKR 188 MADVE E AG QPKKRTF+K+S+RGVDLDALLDM++D+LV+LF +RARRRFQRGLKR Sbjct: 1 MADVEVETEVAAGAQPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKR 60
Query: 189 KPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEM 368 KPMALIKKLRKAK++APAGEKPEPVRTHLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEM Sbjct: 61 KPMALIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEM 120
Query: 369 IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 470 IGHYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 121 IGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
>tr|A9PCZ0|A9PCZ0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 152
Score = 272 bits (696), Expect = 7e-72 Identities = 137/152 (90%), Positives = 143/152 (94%), Gaps = 1/152 (0%) Frame = +3
Query: 18 MADVE-ETGAGVQPKKRTFKKFSFRGVDLDALLDMTSDELVELFHSRARRRFQRGLKRKP 194 MADVE + A QPKKRTFKKFSFRGVDLDALLDM++DELV+LF +RARRRFQRGLKRKP Sbjct: 1 MADVETDVAAAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFPARARRRFQRGLKRKP 60
Query: 195 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 374 MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMI Sbjct: 61 MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIS 120
Query: 375 HYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 470 HYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152
>tr|A9P8I7|A9P8I7_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 152
Score = 272 bits (696), Expect = 7e-72 Identities = 137/152 (90%), Positives = 143/152 (94%), Gaps = 1/152 (0%) Frame = +3
Query: 18 MADVE-ETGAGVQPKKRTFKKFSFRGVDLDALLDMTSDELVELFHSRARRRFQRGLKRKP 194 MADVE + A QPKKRTFKKFSFRGVDLDALLDM++DELV+LF +RARRRFQRGLKRKP Sbjct: 1 MADVEADVAAAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFPARARRRFQRGLKRKP 60
Query: 195 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 374 MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMI Sbjct: 61 MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIS 120
Query: 375 HYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 470 HYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152
>tr|A3BH94|A3BH94_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_022416 PE=3 SV=1 Length = 253
Score = 272 bits (696), Expect = 7e-72 Identities = 134/154 (87%), Positives = 146/154 (94%), Gaps = 3/154 (1%) Frame = +3
Query: 18 MADVE---ETGAGVQPKKRTFKKFSFRGVDLDALLDMTSDELVELFHSRARRRFQRGLKR 188 +ADVE E AG QPKKRTF+K+S+RGVDLDALLDM++D+LV+LF +RARRRFQRGLKR Sbjct: 100 VADVEVETEVAAGAQPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKR 159
Query: 189 KPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEM 368 KPMALIKKLRKAK++APAGEKPEPVRTHLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEM Sbjct: 160 KPMALIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEM 219
Query: 369 IGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 470 IGHYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 220 IGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 253
>tr|A9TG45|A9TG45_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108089 PE=3 SV=1 Length = 150
Score = 272 bits (695), Expect = 9e-72 Identities = 136/151 (90%), Positives = 140/151 (92%) Frame = +3
Query: 18 MADVEETGAGVQPKKRTFKKFSFRGVDLDALLDMTSDELVELFHSRARRRFQRGLKRKPM 197 MAD E QPKKRTFKKF+FRGVDLDALLD + DELVELFH+RARRRFQRGLKRKPM Sbjct: 1 MADAAEVEIA-QPKKRTFKKFTFRGVDLDALLDTSMDELVELFHARARRRFQRGLKRKPM 59
Query: 198 ALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 377 ALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMIGH Sbjct: 60 ALIKKLRKAKREAPTGEKPEPVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGH 119
Query: 378 YLGEFSISYKPVKHGRPGIGATHSSRFIPLK 470 YL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 120 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 150
>tr|B3TLS1|B3TLS1_ELAGV 40S ribosomal protein S15 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 153
Score = 271 bits (692), Expect = 2e-71 Identities = 135/153 (88%), Positives = 142/153 (92%), Gaps = 2/153 (1%) Frame = +3
Query: 18 MADVEETG--AGVQPKKRTFKKFSFRGVDLDALLDMTSDELVELFHSRARRRFQRGLKRK 191 MADV + G QPKKRTF+KFS+RGVDLD LLDM +DELV+LFH+RARRRFQRGLKRK Sbjct: 1 MADVSDAVDVGGAQPKKRTFRKFSYRGVDLDQLLDMGTDELVKLFHARARRRFQRGLKRK 60
Query: 192 PMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 371 PMALIKKLRKAKR+AP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI Sbjct: 61 PMALIKKLRKAKRDAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120
Query: 372 GHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 470 GHYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
|