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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955716
Clone id TST39A01NGRL0023_N13
Library
Length 533
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_N13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
CAAAAAGTTTCCTGTTCACAGTGAAGGCGAGTCATGGCGTGGACTGCAGCCTGCCGTCGA
CCTCTGGTGCGGTTTGTAGTTGGAGGAAGCCAAGCTCCAGCCGCTCCGTCTCAGCGCACC
TCCCTCCGCTACATGTCTGCAGATCATCATCATGGGCCCCCAAAGGTCAACTTTTGGGAA
GATCCAATGAGCCCATCGAAATGGAAAGAAGAACATTTTGTGCTGGTTTCTCTTGCTGGG
TGGGGTCTCCTTGGTTATAGTGTATATAAAGGAATTTCCTTTTTCACAGACAAGCCTCCA
GCGAAAGAGGAGGTCAAGGCTTCACATTAGGTGTCAGCTCATTGAAAATTCCTCAAAAGA
GGCAGGAATAATATGGAAGATCAGTTTTGGCACAAATGCATGGAGGGTGAGGGTTGATGT
TAGGGATGGAGAAAGACCAACTTACTAGTGCAAGTAAAAAACATCATTAGGTTGTTTACC
AGGTTACTCATCTTCATGTAGGATGCCTTTTTTTAAAAAGGACGTTGAGGATA
■■Homology search results ■■ -
sp_hit_id Q5RJC5
Definition sp|Q5RJC5|ZFNL5_ARATH Zinc finger CCCH domain-containing protein ZFN-like 5 OS=Arabidopsis thaliana
Align length 61
Score (bit) 30.4
E-value 5.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955716|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_N13, 5'
         (533 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5RJC5|ZFNL5_ARATH Zinc finger CCCH domain-containing protein...    30   5.6  
sp|P24638|PPAL_MOUSE Lysosomal acid phosphatase OS=Mus musculus ...    30   5.6  
sp|Q7LL00|YQJC_SCHPO Uncharacterized oligopeptide transporter C1...    30   7.3  
sp|Q9ZQ99|COGT1_ARATH Cytokinin-O-glucosyltransferase 1 OS=Arabi...    30   9.5  

>sp|Q5RJC5|ZFNL5_ARATH Zinc finger CCCH domain-containing protein
           ZFN-like 5 OS=Arabidopsis thaliana GN=At5g63260 PE=2
           SV=2
          Length = 435

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 20/61 (32%), Positives = 26/61 (42%)
 Frame = +1

Query: 61  PLVRFVVGGSQAPAAPSQRTSLRYMSADHHHGPPKVNFWEDPMSPSKWKEEHFVLVSLAG 240
           PL R   GGS +P APSQ +S  + S  H +G         P  PS +     V    + 
Sbjct: 231 PLYRGNNGGSFSPKAPSQASSTSWSSTRHMNGTGTA-----PFIPSMFPHSRGVTPQASD 285

Query: 241 W 243
           W
Sbjct: 286 W 286


>sp|P24638|PPAL_MOUSE Lysosomal acid phosphatase OS=Mus musculus
           GN=Acp2 PE=2 SV=2
          Length = 423

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = +1

Query: 28  RVMAWTAACRRPLVRFVVGGSQAPAAPSQRTSLRYMSADHHHG--PPKVNFWEDPMSPSK 201
           R   W+ A    L++F++G       P Q  SLR+++  + HG   P   + +DP    K
Sbjct: 4   RQTGWSQAA---LLQFLLGMCLTVMPPIQARSLRFVTLLYRHGDRSPVKTYPKDPYQEEK 60

Query: 202 WKE 210
           W +
Sbjct: 61  WPQ 63


>sp|Q7LL00|YQJC_SCHPO Uncharacterized oligopeptide transporter
           C1840.12 OS=Schizosaccharomyces pombe GN=SPCC1840.12
           PE=3 SV=2
          Length = 791

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +2

Query: 200 NGKKNILCWFLLLGGVSLVIVYIKEFPFSQTS 295
           +G+ + + WF L+G V  V+VY+ +  F ++S
Sbjct: 648 DGRYSFVMWFFLVGAVVSVVVYLLQISFPKSS 679


>sp|Q9ZQ99|COGT1_ARATH Cytokinin-O-glucosyltransferase 1
           OS=Arabidopsis thaliana GN=UGT73C1 PE=2 SV=1
          Length = 491

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 162 WGPMMMICRHVAEGGALRRSGWS 94
           W P M+I  H A GG L   GW+
Sbjct: 351 WSPQMLILTHPAVGGFLTHCGWN 373
tr_hit_id A7P1F9
Definition tr|A7P1F9|A7P1F9_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera
Align length 96
Score (bit) 95.9
E-value 1.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955716|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_N13, 5'
         (533 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P1F9|A7P1F9_VITVI Chromosome chr19 scaffold_4, whole genome...    96   1e-18
tr|A7PXF3|A7PXF3_VITVI Chromosome chr12 scaffold_36, whole genom...    89   1e-16
tr|A9P9R5|A9P9R5_POPTR Putative uncharacterized protein OS=Popul...    88   2e-16
tr|A9P8A4|A9P8A4_POPTR Putative uncharacterized protein OS=Popul...    88   2e-16
tr|A9PC75|A9PC75_POPTR Putative uncharacterized protein OS=Popul...    84   5e-15
tr|A9NPR6|A9NPR6_PICSI Putative uncharacterized protein OS=Picea...    84   6e-15
tr|Q4LAW3|Q4LAW3_CAPCH Putative uncharacterized protein OS=Capsi...    80   7e-14
tr|Q9FEF9|Q9FEF9_ARATH Putative uncharacterized protein At2g2082...    72   2e-11
tr|A5ADR5|A5ADR5_VITVI Putative uncharacterized protein OS=Vitis...    70   7e-11
tr|B6TNQ2|B6TNQ2_MAIZE Putative uncharacterized protein OS=Zea m...    67   4e-10
tr|Q75ID5|Q75ID5_ORYSJ Os03g0581800 protein OS=Oryza sativa subs...    66   1e-09
tr|Q10HN8|Q10HN8_ORYSJ Expressed protein (Putative uncharacteriz...    66   1e-09
tr|B8AL63|B8AL63_ORYSI Putative uncharacterized protein OS=Oryza...    66   1e-09
tr|A9TN44|A9TN44_PHYPA Predicted protein (Fragment) OS=Physcomit...    66   1e-09
tr|B6T180|B6T180_MAIZE Putative uncharacterized protein OS=Zea m...    65   2e-09
tr|B6T1X1|B6T1X1_MAIZE Putative uncharacterized protein OS=Zea m...    64   5e-09
tr|A9TYX3|A9TYX3_PHYPA Predicted protein (Fragment) OS=Physcomit...    61   3e-08
tr|B6UFF3|B6UFF3_MAIZE Putative uncharacterized protein OS=Zea m...    59   2e-07
tr|A4RY04|A4RY04_OSTLU Predicted protein OS=Ostreococcus lucimar...    52   2e-05
tr|Q9SKT5|Q9SKT5_ARATH Expressed protein (Putative uncharacteriz...    45   0.003
tr|A4A325|A4A325_9PLAN Putative uncharacterized protein OS=Blast...    36   1.1  
tr|A8III7|A8III7_CHLRE Predicted protein OS=Chlamydomonas reinha...    33   7.0  

>tr|A7P1F9|A7P1F9_VITVI Chromosome chr19 scaffold_4, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00027602001
           PE=4 SV=1
          Length = 149

 Score = 95.9 bits (237), Expect = 1e-18
 Identities = 55/96 (57%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
 Frame = +1

Query: 37  AWTAACRRP--LVRFVVGGSQAPAAPSQRTSLRYMSADHHHGPPKVNFWEDPMSPSKWKE 210
           AWTA  R+   L R     S AP A S        S   HHGPPKVNFW+DP+SPSKWKE
Sbjct: 3   AWTAVARQAGNLTRL---SSPAPLATSLIHRRGLASGGDHHGPPKVNFWQDPLSPSKWKE 59

Query: 211 EHFVLVSLAGWGLLGYSVYKGISFFT-DKPPAKEEV 315
           EHFV+VSL+GWGLL Y  YK   FFT  K   KEEV
Sbjct: 60  EHFVIVSLSGWGLLFYGGYK---FFTKGKKDNKEEV 92


>tr|A7PXF3|A7PXF3_VITVI Chromosome chr12 scaffold_36, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026016001
           PE=4 SV=1
          Length = 100

 Score = 89.0 bits (219), Expect = 1e-16
 Identities = 43/65 (66%), Positives = 49/65 (75%), Gaps = 2/65 (3%)
 Frame = +1

Query: 139 ADHHHGPPKVNFWEDPMSPSKWKEEHFVLVSLAGWGLLGYSVYKGISFFTDKPPAKEE-- 312
           A  HHGPP++N WEDPMSPSKWKEEHFV+VSL+GWGLL +  YK   FFT     KEE  
Sbjct: 39  AADHHGPPRINVWEDPMSPSKWKEEHFVIVSLSGWGLLFFGSYK---FFTRGKKDKEEKL 95

Query: 313 VKASH 327
           V+ASH
Sbjct: 96  VEASH 100


>tr|A9P9R5|A9P9R5_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 100

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 6/84 (7%)
 Frame = +1

Query: 94  APAAPSQRTSLRYM----SADHHHGPPKVNFWEDPMSPSKWKEEHFVLVSLAGWGLLGYS 261
           +P  P+Q  +L +      A  HHGPP++N W+DPMSPSKWKEEHFV+VSL+GWG+L   
Sbjct: 20  SPKTPAQAAALIHRRGLAGAADHHGPPRINCWQDPMSPSKWKEEHFVIVSLSGWGVL--- 76

Query: 262 VYKGISFFTDKPPAKEE--VKASH 327
           +Y G  FFT     KEE  ++A+H
Sbjct: 77  IYGGYKFFTGGKSNKEEKPLEAAH 100


>tr|A9P8A4|A9P8A4_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 100

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 6/84 (7%)
 Frame = +1

Query: 94  APAAPSQRTSLRYM----SADHHHGPPKVNFWEDPMSPSKWKEEHFVLVSLAGWGLLGYS 261
           +P  P+Q  +L +      A  HHGPP++N W+DPMSPSKWKEEHFV+VSL+GWG+L   
Sbjct: 20  SPKTPAQAAALIHRRGLAGAADHHGPPRINCWQDPMSPSKWKEEHFVIVSLSGWGVL--- 76

Query: 262 VYKGISFFTDKPPAKEE--VKASH 327
           +Y G  FFT     KEE  ++A+H
Sbjct: 77  IYGGYKFFTGGKSNKEEKPLEAAH 100


>tr|A9PC75|A9PC75_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 101

 Score = 84.0 bits (206), Expect = 5e-15
 Identities = 46/101 (45%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
 Frame = +1

Query: 34  MAWTAACRRPLVRFVVGGSQAPAAPSQRTSLRYMS-ADHHHGPPKVNFWEDPMSPSKWKE 210
           +A  AA R+      +   ++PA  +     R ++ A  HHGP ++N W+DPMSPSKWKE
Sbjct: 4   LAAAAAARQAATLSRISSPKSPARVAALIHRRGLAGAADHHGPSRINCWQDPMSPSKWKE 63

Query: 211 EHFVLVSLAGWGLLGYSVYKGISFFTDKPPAKEE--VKASH 327
           EHFV+VSL+GWGL  Y  YK   FFT     +EE  V+A+H
Sbjct: 64  EHFVIVSLSGWGLAFYGGYK---FFTGGKGKEEEKVVEAAH 101


>tr|A9NPR6|A9NPR6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 99

 Score = 83.6 bits (205), Expect = 6e-15
 Identities = 42/60 (70%), Positives = 46/60 (76%)
 Frame = +1

Query: 109 SQRTSLRYMSADHHHGPPKVNFWEDPMSPSKWKEEHFVLVSLAGWGLLGYSVYKGISFFT 288
           SQ    R  SA+HH GP KVNFWEDPMSPSKWK+EHFVL SL+GWG+L YS YK   FFT
Sbjct: 28  SQLQPSRRFSAEHH-GPAKVNFWEDPMSPSKWKDEHFVLWSLSGWGVLIYSGYK---FFT 83


>tr|Q4LAW3|Q4LAW3_CAPCH Putative uncharacterized protein OS=Capsicum
           chinense PE=4 SV=1
          Length = 96

 Score = 80.1 bits (196), Expect = 7e-14
 Identities = 36/61 (59%), Positives = 44/61 (72%)
 Frame = +1

Query: 130 YMSADHHHGPPKVNFWEDPMSPSKWKEEHFVLVSLAGWGLLGYSVYKGISFFTDKPPAKE 309
           +  A  HHGPPKVN W++PM+P++WKEEHFV+VSL+GWGLL Y  YK    FT     KE
Sbjct: 32  FAGAADHHGPPKVNCWKEPMNPAQWKEEHFVIVSLSGWGLLFYGGYK---LFTGGKKNKE 88

Query: 310 E 312
           E
Sbjct: 89  E 89


>tr|Q9FEF9|Q9FEF9_ARATH Putative uncharacterized protein At2g20820
           (At2g20820/F5H14.21) (At2g20820) OS=Arabidopsis thaliana
           GN=At2g20820/F5H14.21 PE=4 SV=1
          Length = 93

 Score = 71.6 bits (174), Expect = 2e-11
 Identities = 34/61 (55%), Positives = 40/61 (65%)
 Frame = +1

Query: 88  SQAPAAPSQRTSLRYMSADHHHGPPKVNFWEDPMSPSKWKEEHFVLVSLAGWGLLGYSVY 267
           S   A+  QR  L    A  HHG  KV+FW+ P +P  WKEEHFVL+SL+GWGLL YS Y
Sbjct: 20  SSGAASIGQRRCLA--GAADHHGSTKVDFWKQPTNPGNWKEEHFVLISLSGWGLLFYSGY 77

Query: 268 K 270
           K
Sbjct: 78  K 78


>tr|A5ADR5|A5ADR5_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_020968 PE=4 SV=1
          Length = 201

 Score = 70.1 bits (170), Expect = 7e-11
 Identities = 54/146 (36%), Positives = 60/146 (41%), Gaps = 53/146 (36%)
 Frame = +1

Query: 37  AWTAACRRP--LVRFVVGGSQAPAAPSQRTSLRYMSADHHHGPPKVNFWEDPMSPSKWKE 210
           AWTA  R+   L R +     AP A S        S   HHGPPKVNFW+DP+SPSKWKE
Sbjct: 3   AWTAVARQAWNLTR-LSXPRPAPQATSXIHRRGLASGGDHHGPPKVNFWQDPLSPSKWKE 61

Query: 211 EH--------------------------------------------------FVLVSLAG 240
           EH                                                  FV+VSL+G
Sbjct: 62  EHTCSMSSPDMKTMQLTRFFHFVFYLLREGRELMHHHCYPGLSCDVSVASKPFVIVSLSG 121

Query: 241 WGLLGYSVYKGISFFT-DKPPAKEEV 315
           WGLL Y  YK   FFT  K   KEEV
Sbjct: 122 WGLLFYGGYK---FFTKGKKDNKEEV 144


>tr|B6TNQ2|B6TNQ2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 92

 Score = 67.4 bits (163), Expect = 4e-10
 Identities = 40/84 (47%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
 Frame = +1

Query: 70  RFVVGGSQAPAA-PSQRTSLR--YMSADHHHGPPKVNFWEDPMSPSKWKEEHFVLVSLAG 240
           RFV   S + ++ P  R   R     A   HGP KV  W+DP+SPSKWKEEHFVL SL+ 
Sbjct: 6   RFVAAASSSSSSCPLARLISRRGLAGAADGHGPAKVPLWKDPLSPSKWKEEHFVLASLSM 65

Query: 241 WGLLGYSVYKGISFFTDKPPAKEE 312
           WG L    Y G  FF  K   K E
Sbjct: 66  WGAL---FYGGFKFFGGKKEDKIE 86