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NBDC - LSDB Archive
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DK955726
Clone id TST39A01NGRL0023_N23
Library
Length 535
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_N23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CAGAGAGAAGGAGAGGGGGCCCGAGAGGGAGAAGCTCGTGTTTGTTTGCAGAAATGGCTG
CCATGCAGGCGACATTGGGCGTTTCCTGCCCTTCTTCGTCTCTATGCAAGTCGTCTTTCT
TGGGGAGCGCCTCTCGTCTTTCTCGGGTGGCCTCTGCTATTGCCCCTTCCCCTGTCCGTG
CCTTCAAGGTCGAGGCAAAGAAAGGCGAATGGCTTCCCGGTCTGGCATCCCCTGCTTACC
TAGACGGAAACCTTGCTGGTGACAATGGCTTCGACCCCCTTGGCTTGGCTGAGGATCCTG
CCAACCTTAAATGGTATGTGCAAGCAGAGCTTCAAAATGGAAGATGGGCAATGCTTGGAG
TAGCTGGCATGTTGATCCCCGACCTCTTGACAAAGATTGGTATCATCAATGTTCCTGCAT
GGTATGATGCGGGCAAGGTCGAGTACTTCGCCCCCGCCTCCACTCTCTTTGTGATCGAAT
TCATCTTGTTCCACTATGTGGAGGTGAGAAGATGGCAAGACATCAAGTACCCTGG
■■Homology search results ■■ -
sp_hit_id P27521
Definition sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana
Align length 118
Score (bit) 216.0
E-value 5.0e-56
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955726|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_N23, 5'
         (535 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...   216   5e-56
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...   210   4e-54
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...   154   3e-37
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   147   2e-35
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   142   8e-34
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    92   2e-18
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    89   1e-17
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...    89   1e-17
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...    86   1e-16
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    85   2e-16
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    81   3e-15
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    75   2e-13
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    68   3e-11
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F...    66   9e-11
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...    66   1e-10
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    65   3e-10
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    62   1e-09
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...    62   2e-09
sp|P08975|LH15_EUGGR Light-harvesting complex I LH35 proteins (F...    61   4e-09
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...    59   1e-08
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...    59   1e-08
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    59   1e-08
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    59   2e-08
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    59   2e-08
sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragmen...    59   2e-08
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    58   2e-08
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    58   2e-08
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...    58   3e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    58   3e-08
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    58   3e-08

>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score =  216 bits (550), Expect = 5e-56
 Identities = 100/118 (84%), Positives = 109/118 (92%)
 Frame = +3

Query: 180 AFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLG 359
           +FKVEAKKGEWLPGLASP YL G+LAGDNGFDPLGLAEDP NLKW+VQAEL NGRWAMLG
Sbjct: 47  SFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLG 106

Query: 360 VAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYP 533
           VAGML+P++ TKIGIINVP WYDAGK +YFA +STLFVIEFILFHYVE+RRWQDIK P
Sbjct: 107 VAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNP 164


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score =  210 bits (534), Expect = 4e-54
 Identities = 98/122 (80%), Positives = 107/122 (87%)
 Frame = +3

Query: 168 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 347
           SP  +FKVEAKKGEWLPGLASP YL G+L GDNGFDPLGLAEDP NL+W+VQAEL NGRW
Sbjct: 42  SPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRW 101

Query: 348 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 527
           AMLGVAGML+P++ T IGIINVP WY AGK EYFA +STLFVIEFIL HYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIK 161

Query: 528 YP 533
            P
Sbjct: 162 NP 163


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score =  154 bits (389), Expect = 3e-37
 Identities = 80/132 (60%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
 Frame = +3

Query: 141 SRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYV 320
           S  AS    S  R   V+AK G WLPGL SPAYLDG+L GDNGFDPL LAEDP +L+W+V
Sbjct: 14  SPAASGSPRSTRRDVAVQAK-GSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFV 72

Query: 321 QAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYD-AGKVEYFAPASTLFVIEFILFHY 497
           QA++ NGRWAMLGVAGMLIP++LTK G++N P W    GK  YFA +ST   +  +   Y
Sbjct: 73  QADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTY 131

Query: 498 VEVRRWQDIKYP 533
           VE+RRWQDIK P
Sbjct: 132 VEIRRWQDIKNP 143


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  147 bits (372), Expect = 2e-35
 Identities = 72/135 (53%), Positives = 88/135 (65%), Gaps = 5/135 (3%)
 Frame = +3

Query: 144 RVASAIAPSPVRAFKVEAKKGE-----WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL 308
           RV+  IAP   R+  V A   +     W PG   P +LDG+L GD GFDPLGL  DP +L
Sbjct: 41  RVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL 100

Query: 309 KWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFIL 488
           KW  QAEL + RWAMLG AG+ IP+ LTKIG++N P+WY AG+ EYF   +TLFVIE +L
Sbjct: 101 KWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVL 160

Query: 489 FHYVEVRRWQDIKYP 533
             + E RRW DI  P
Sbjct: 161 IGWAEGRRWADIIKP 175



 Score = 33.9 bits (76), Expect = 0.50
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 243 DGNLAGDNGFDPLGLAE-DPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIIN 410
           D    G   FDPLG     PA +K     E++NGR AML V G     + T  G I+
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPID 249


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  142 bits (359), Expect = 8e-34
 Identities = 64/108 (59%), Positives = 79/108 (73%)
 Frame = +3

Query: 210 WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLL 389
           W PG   P +LDG+L GD GFDPLGLA DP +L+W  QAEL + RWAMLG AG+ IP+LL
Sbjct: 68  WFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELL 127

Query: 390 TKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYP 533
           TKIGI+N P+WY AG+ EYF   +TLF++E +L  + E RRW DI  P
Sbjct: 128 TKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKP 175



 Score = 33.9 bits (76), Expect = 0.50
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 243 DGNLAGDNGFDPLGLAE-DPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIIN 410
           D    G   FDPLG     PA +K     E++NGR AML V G     + T  G I+
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPID 249


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 92.0 bits (227), Expect = 2e-18
 Identities = 58/140 (41%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
 Frame = +3

Query: 141 SRVASAIAPSPVRAFKVEAKKGEWLPG------LASPAYLDGNLAGDNGFDPLGLAEDPA 302
           +RV  A  P         AKK  W+P       L  P +LDG+L GD GFDPLGL +DPA
Sbjct: 33  ARVGGAATPKRFTVLAAAAKKS-WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA 91

Query: 303 NLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAG-KVEYFAPAS--TLFV 473
            LKWY +AEL +GRWAM  V G+ +    + I       W++AG      AP S  TL  
Sbjct: 92  FLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGTLLG 145

Query: 474 IEFILFHYVEVRRWQDIKYP 533
            + IL  +VE +RW D   P
Sbjct: 146 TQLILMGWVESKRWVDFFDP 165


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 53/119 (44%), Positives = 67/119 (56%), Gaps = 6/119 (5%)
 Frame = +3

Query: 195 AKKGEWLPGLAS------PAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAML 356
           A K  W+P +        P +LDG+L GD GFDPLGL +DPA LKWY +AEL +GRWAML
Sbjct: 55  APKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAML 114

Query: 357 GVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYP 533
            V G+ +    T  GI    A  D G V  F+   TL   + +L  +VE +RW D   P
Sbjct: 115 AVLGIFVGQAWT--GIPWFEAGADPGAVAPFS-FGTLLGTQLLLMGWVESKRWVDFFDP 170


>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 60/148 (40%), Positives = 76/148 (51%), Gaps = 15/148 (10%)
 Frame = +3

Query: 135 RLSRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL-- 308
           + S V  A +  PV   K  A +  W     S +YLDG L GD GFDPLGL+ DP     
Sbjct: 34  KASFVVRAASTPPV---KQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGG 89

Query: 309 ----KWYVQAELQNGRWAMLGVAGMLIPDLLTKIGII---NVPAWYD------AGKVEYF 449
               KW    E+ NGR+AMLG AG + P++L K G+I      AW+       AG   Y+
Sbjct: 90  FIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYW 149

Query: 450 APASTLFVIEFILFHYVEVRRWQDIKYP 533
           A   TLFV+E  L  + E RR+QD   P
Sbjct: 150 ADNYTLFVLEMALMGFAEHRRFQDWAKP 177



 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 25/63 (39%), Positives = 34/63 (53%)
 Frame = +3

Query: 213 LPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLT 392
           L G   PAY  G L     F+PLG  +D  ++K     E++NGR AML + G  I  L+T
Sbjct: 192 LGGSGDPAYPGGPL-----FNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVT 246

Query: 393 KIG 401
            +G
Sbjct: 247 GVG 249


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 56/141 (39%), Positives = 74/141 (52%), Gaps = 15/141 (10%)
 Frame = +3

Query: 156 AIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL------KWY 317
           A A  PV+   V+  +  W     S +YLDG+L GD GFDPLGL+ DP         +W 
Sbjct: 42  AAATPPVKQGGVD--RPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWL 98

Query: 318 VQAELQNGRWAMLGVAGMLIPDLLTKIGII---NVPAWYD------AGKVEYFAPASTLF 470
              E+ NGR+AMLG  G + P+ L K+G+I      AW+       AG   Y+A   TLF
Sbjct: 99  AYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 158

Query: 471 VIEFILFHYVEVRRWQDIKYP 533
           V+E  L  + E RR+QD   P
Sbjct: 159 VLEMALMGFAEHRRFQDWAKP 179



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/61 (39%), Positives = 33/61 (54%)
 Frame = +3

Query: 219 GLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKI 398
           G  +PAY  G       F+PLG  +D  +LK     E++NGR AML + G  I  L+T +
Sbjct: 196 GSGNPAYPGGPF-----FNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGV 250

Query: 399 G 401
           G
Sbjct: 251 G 251


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 50/118 (42%), Positives = 67/118 (56%), Gaps = 9/118 (7%)
 Frame = +3

Query: 195 AKKGEWLPGLAS------PAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAML 356
           A K  W+P + S      P +LDG+L GD GFDPLGL +DPA LKWY +AEL +GRWAM 
Sbjct: 50  APKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA 109

Query: 357 GVAGMLIPDLLTKIGIINVPAWYDAG-KVEYFAPAS--TLFVIEFILFHYVEVRRWQD 521
            V G+ +    + I       W++AG      AP S  +L   + +L  +VE +RW D
Sbjct: 110 AVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVD 161
tr_hit_id Q07489
Definition tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I OS=Pinus sylvestris
Align length 157
Score (bit) 224.0
E-value 2.0e-57
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955726|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_N23, 5'
         (535 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-har...   224   2e-57
tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of light-har...   223   6e-57
tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea...   221   1e-56
tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding prote...   221   2e-56
tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromos...   219   7e-56
tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein ...   218   2e-55
tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medic...   217   3e-55
tr|Q1H8L9|Q1H8L9_SOLTU Chlorophyll a/b binding protein OS=Solanu...   214   2e-54
tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta ...   213   4e-54
tr|A9PIX4|A9PIX4_POPJC Putative uncharacterized protein OS=Popul...   213   4e-54
tr|Q7M1K9|Q7M1K9_SOLLC Chlorophyll a/b-binding protein (cab-11) ...   213   5e-54
tr|Q7M1K8|Q7M1K8_SOLLC Chlorophyll a/b-binding protein (cab-12) ...   211   1e-53
tr|B6SZR1|B6SZR1_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   211   1e-53
tr|B4FV94|B4FV94_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   209   9e-53
tr|B6TNZ8|B6TNZ8_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   206   5e-52
tr|B8LS59|B8LS59_BAMOL Photosystem I light-harvesting complex ty...   206   8e-52
tr|B6TFT2|B6TFT2_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   205   1e-51
tr|Q6YWJ7|Q6YWJ7_ORYSJ Os08g0435900 protein OS=Oryza sativa subs...   202   1e-50
tr|Q6SYB3|Q6SYB3_ORYSJ Chlorophyll a/b binding protein presusor ...   202   1e-50
tr|A2YVJ1|A2YVJ1_ORYSI Putative uncharacterized protein OS=Oryza...   202   1e-50
tr|Q9ZSU1|Q9ZSU1_ORYSA Chlorophyll a/b-binding protein presursor...   199   7e-50
tr|A2YVI8|A2YVI8_ORYSI Putative uncharacterized protein OS=Oryza...   198   1e-49
tr|Q9LKC7|Q9LKC7_HORVU Chlorophyll a/b-binding protein (Fragment...   198   2e-49
tr|Q40481|Q40481_TOBAC Light-harvesting chlorophyll a /b binding...   196   6e-49
tr|B6DYZ9|B6DYZ9_LIQST Chloroplast chlorophyll a-b binding prote...   174   2e-42
tr|B6DZ35|B6DZ35_9MAGN Chloroplast chlorophyll a-b binding prote...   173   4e-42
tr|B6DZ26|B6DZ26_9MAGN Chloroplast chlorophyll a-b binding prote...   173   6e-42
tr|B6DZ24|B6DZ24_9MAGN Chloroplast chlorophyll a-b binding prote...   173   6e-42
tr|B6DZ20|B6DZ20_9MAGN Chloroplast chlorophyll a-b binding prote...   173   6e-42
tr|B6DZ12|B6DZ12_9MAGN Chloroplast chlorophyll a-b binding prote...   173   6e-42

>tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I OS=Pinus
           sylvestris GN=Lhca4*1-1 PE=2 SV=1
          Length = 251

 Score =  224 bits (571), Expect = 2e-57
 Identities = 112/157 (71%), Positives = 125/157 (79%), Gaps = 1/157 (0%)
 Frame = +3

Query: 66  QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 242
           QA LGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP+YL
Sbjct: 7   QAALGVSCPSVCRSAFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYL 65

Query: 243 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 422
           +G+L GDNGFDPLGLAEDP +LKWYVQAEL NGRWAMLGVAGMLIP++LT IG+INVP W
Sbjct: 66  NGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEVLTSIGLINVPKW 125

Query: 423 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYP 533
           YDAGKVEYFA +STLFVIEFILFHYVE+RRWQDIKYP
Sbjct: 126 YDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYP 162


>tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I (Fragment)
           OS=Pinus sylvestris GN=Lhca4*1-2 PE=2 SV=1
          Length = 244

 Score =  223 bits (567), Expect = 6e-57
 Identities = 105/130 (80%), Positives = 117/130 (90%)
 Frame = +3

Query: 144 RVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQ 323
           RV     P+P R+FKVEAK GEWLPGL+SP+YL+G+L GDNGFDPLGLAEDP +LKWYVQ
Sbjct: 27  RVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESLKWYVQ 85

Query: 324 AELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVE 503
           AEL NGRWAMLGVAGMLIP++LT IG+INVP WYDAGKVEYFA +STLFVIEFILFHYVE
Sbjct: 86  AELVNGRWAMLGVAGMLIPEVLTSIGLINVPKWYDAGKVEYFASSSTLFVIEFILFHYVE 145

Query: 504 VRRWQDIKYP 533
           +RRWQDIKYP
Sbjct: 146 LRRWQDIKYP 155


>tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 251

 Score =  221 bits (564), Expect = 1e-56
 Identities = 111/157 (70%), Positives = 123/157 (78%), Gaps = 1/157 (0%)
 Frame = +3

Query: 66  QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 242
           QATLGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP YL
Sbjct: 7   QATLGVSCRSVCRSGFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPTYL 65

Query: 243 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 422
           +G+L GDNGFDPLGLAEDP +LKWYVQAEL NGRWAMLGVAGMLIP++LT  G I+VP W
Sbjct: 66  NGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEVLTSFGFIDVPKW 125

Query: 423 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYP 533
           YDAGKVEYFA +STLFVIEFILFHYVE+RRWQDIKYP
Sbjct: 126 YDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYP 162


>tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding protein
           OS=Capsicum annuum PE=2 SV=1
          Length = 250

 Score =  221 bits (563), Expect = 2e-56
 Identities = 103/133 (77%), Positives = 115/133 (86%)
 Frame = +3

Query: 135 RLSRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKW 314
           +L+R  S    +   +FKVEAKKGEWLPGLASPAYLDG+L GDNGFDPLGLAEDP NLKW
Sbjct: 29  KLNREVSFRPSTSNNSFKVEAKKGEWLPGLASPAYLDGSLPGDNGFDPLGLAEDPENLKW 88

Query: 315 YVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFH 494
           Y+QAEL NGRWAMLGVAGML+P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFH
Sbjct: 89  YIQAELVNGRWAMLGVAGMLLPEVFTSIGILNVPKWYDAGKAEYFASSSTLFVIEFILFH 148

Query: 495 YVEVRRWQDIKYP 533
           YVE+RRWQDIK P
Sbjct: 149 YVEIRRWQDIKNP 161


>tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromosome
           chr17 scaffold_12, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00016319001 PE=4 SV=1
          Length = 252

 Score =  219 bits (558), Expect = 7e-56
 Identities = 101/122 (82%), Positives = 110/122 (90%)
 Frame = +3

Query: 168 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 347
           S  R+FKVEAKKGEWLPGL+SP+YLDG+L GDNGFDPLGLAEDP NLKWYVQAEL N RW
Sbjct: 42  SSYRSFKVEAKKGEWLPGLSSPSYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRW 101

Query: 348 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 527
           AMLGVAGML+P++ TKIGIIN P WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 528 YP 533
            P
Sbjct: 162 NP 163


>tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein
           type 4 OS=Pinus pinaster PE=2 SV=1
          Length = 251

 Score =  218 bits (554), Expect = 2e-55
 Identities = 109/157 (69%), Positives = 122/157 (77%), Gaps = 1/157 (0%)
 Frame = +3

Query: 66  QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 242
           QA LGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP+YL
Sbjct: 7   QAALGVSCPSVCRSGFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYL 65

Query: 243 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 422
           +G+L GDNG DPLGLAEDP +LKWYVQAEL NGRWAMLGVAGM IP++LT IG+INVP W
Sbjct: 66  NGSLPGDNGXDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMXIPEVLTSIGLINVPKW 125

Query: 423 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYP 533
           YDAGKVEYFA + TLFVIEFILFHYVE+RRWQDIKYP
Sbjct: 126 YDAGKVEYFASSXTLFVIEFILFHYVELRRWQDIKYP 162


>tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 253

 Score =  217 bits (553), Expect = 3e-55
 Identities = 101/122 (82%), Positives = 109/122 (89%)
 Frame = +3

Query: 168 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 347
           SP  +FKVEAKKGEWLPGLASP YL G+L GDNGFDPLGLAEDP NLKW+VQAEL NGRW
Sbjct: 42  SPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRW 101

Query: 348 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 527
           AMLGVAGML+P++ T IGIINVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 528 YP 533
            P
Sbjct: 162 NP 163


>tr|Q1H8L9|Q1H8L9_SOLTU Chlorophyll a/b binding protein OS=Solanum
           tuberosum GN=cab1 PE=2 SV=1
          Length = 251

 Score =  214 bits (546), Expect = 2e-54
 Identities = 98/122 (80%), Positives = 109/122 (89%)
 Frame = +3

Query: 168 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 347
           S   +FKVEAKKG+WLPGLASP YLDG+L GDNGFDPLGLAEDP NLKW++QAEL NGRW
Sbjct: 42  SSYNSFKVEAKKGQWLPGLASPDYLDGSLPGDNGFDPLGLAEDPENLKWFIQAELVNGRW 101

Query: 348 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 527
           AMLGVAGML+P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTSIGILNVPKWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 528 YP 533
            P
Sbjct: 162 NP 163


>tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta
           vulgaris GN=cab11 PE=2 SV=1
          Length = 252

 Score =  213 bits (543), Expect = 4e-54
 Identities = 99/122 (81%), Positives = 109/122 (89%)
 Frame = +3

Query: 168 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 347
           S   + KVEAKKGEWLPGLASPAYL+G+L GDNGFDPL LAEDP NLKW+VQAEL NGRW
Sbjct: 42  SSTNSLKVEAKKGEWLPGLASPAYLNGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRW 101

Query: 348 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 527
           AMLGVAGML+P++ T+IGIINVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTQIGIINVPKWYDAGKQEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 528 YP 533
            P
Sbjct: 162 NP 163


>tr|A9PIX4|A9PIX4_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 251

 Score =  213 bits (543), Expect = 4e-54
 Identities = 97/118 (82%), Positives = 108/118 (91%)
 Frame = +3

Query: 180 AFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLG 359
           +FKVEAKKGEWLPGL SP+YL+G+L GDNGFDPLGLAEDP NL+W+VQAEL NGRWAMLG
Sbjct: 45  SFKVEAKKGEWLPGLPSPSYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLG 104

Query: 360 VAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYP 533
           VAGML+P++ TKIGIIN P WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK P
Sbjct: 105 VAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNP 162