DK955737
Clone id TST39A01NGRL0023_O10
Library
Length 587
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_O10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTGACTGTGGCACAGAAGAGACTCTTAGTTATGCTCACGCATATTTCCTCAATATCCATC
TGTAGTTGAGCACACTTCCTTCATTTCTAGGGTTGATGCCCTCCCTGTGTATCTGCATAC
CTCTTGCTTGTGCGTTTGCATATACACCGTTTCTTCTCAGCCCTTCCATCAACTCTTGCT
TGGGCTTTGCTATGACGCCGCAGTGCTCCTTGTTTTCAAGTTGGGAGCTTTTCCCTACTG
CCGTGCAGTGCAGATCTGCACTTAGATCTAAGGGAGACGTCTGGTTTCCATGAATTCTTC
CGCAGATCTTAGTCCTCTACAACAGTGAAGGGCGATCTAACAGGATATAATACACCGGGG
TGTGAGTGATATCGATCTGTCTAATGGGTACGGCTGTTCTCTTTCCGCATGACTGCCTAC
CCATATCCAAAAGCAGGTCAAGGAACAACTTTACAGATGGTTTTAGTGGATCTCCAGTAG
CAATTGACAGCCCTTTTCAGCTCTTTGATTCTTTCGATCAAGCAAGACATAGCTTTGCCT
CTTATCATGGAGCTAGACCGTGTTATCCGCATAGAGCAAGAAGTAGC
■■Homology search results ■■ -
sp_hit_id Q9J5I3
Definition sp|Q9J5I3|V018_FOWPV Putative ankyrin repeat protein FPV018 OS=Fowlpox virus
Align length 36
Score (bit) 30.8
E-value 5.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955737|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_O10, 5'
(587 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9J5I3|V018_FOWPV Putative ankyrin repeat protein FPV018 OS=F... 31 5.2

>sp|Q9J5I3|V018_FOWPV Putative ankyrin repeat protein FPV018
OS=Fowlpox virus GN=FPV018 PE=4 SV=1
Length = 700

Score = 30.8 bits (68), Expect = 5.2
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2

Query: 77 SFISRVDALPV-YLHTSCLCVCIYTVSSQPFHQLLL 181
S IS + +LPV YL S LC+CIY + + P + LL
Sbjct: 347 SIISYILSLPVNYLPISILCMCIYELRNLPITRKLL 382


tr_hit_id A5DIX9
Definition tr|A5DIX9|A5DIX9_PICGU Putative uncharacterized protein OS=Pichia guilliermondii
Align length 104
Score (bit) 35.4
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955737|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_O10, 5'
(587 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5DIX9|A5DIX9_PICGU Putative uncharacterized protein OS=Pichi... 35 2.4
tr|Q5M8G3|Q5M8G3_XENTR Sodium channel, voltage-gated, type IV, b... 35 3.1
tr|B4LXD1|B4LXD1_DROVI GJ22884 OS=Drosophila virilis GN=GJ22884 ... 34 5.3
tr|Q6PAV6|Q6PAV6_XENLA MGC68679 protein OS=Xenopus laevis GN=scn... 34 7.0
tr|B5QIV3|B5QIV3_CAMJE Putative transposase OS=Campylobacter jej... 34 7.0
tr|B5GIJ0|B5GIJ0_9ACTO Putative uncharacterized protein OS=Strep... 34 7.0

>tr|A5DIX9|A5DIX9_PICGU Putative uncharacterized protein OS=Pichia
guilliermondii GN=PGUG_03230 PE=3 SV=2
Length = 902

Score = 35.4 bits (80), Expect = 2.4
Identities = 22/104 (21%), Positives = 41/104 (39%)
Frame = -2

Query: 379 QIDITHTPVYYILLDRPSLL*RTKICGRIHGNQTSPLDLSADLHCTAVGKSSQLENKEHC 200
Q + +P++Y P+ HG +SPL S+ +H T+ G S +
Sbjct: 37 QAHVPSSPLFYASSSNPASEANAPATASTHGGMSSPLHYSSSVHHTSGGLESSRRSDRLT 96

Query: 199 GVIAKPKQELMEGLRRNGVYANAQARGMQIHREGINPRNEGSVL 68
+ + + N V ++ R M + NP++ S+L
Sbjct: 97 SDVERIGRRHQRSDLNNDVMSSPMRRRMFVDETNSNPQSSSSLL 140


>tr|Q5M8G3|Q5M8G3_XENTR Sodium channel, voltage-gated, type IV, beta
OS=Xenopus tropicalis GN=scn4b PE=2 SV=1
Length = 237

Score = 35.0 bits (79), Expect = 3.1
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3

Query: 366 VISICLMGTAVLFPHDCLPISKSRSRNNFTDGFSGSPVAIDSPFQLFDSFDQARHSF 536
+ +ICL+ VLF H CLP+ S +NN +GS V + F F+ S+
Sbjct: 19 LFAICLI---VLFAHACLPLEVSVGKNNLITAINGSNVTLPCSFMACIGFNTVTFSW 72


>tr|B4LXD1|B4LXD1_DROVI GJ22884 OS=Drosophila virilis GN=GJ22884
PE=4 SV=1
Length = 2179

Score = 34.3 bits (77), Expect = 5.3
Identities = 26/92 (28%), Positives = 36/92 (39%)
Frame = -2

Query: 427 DMGRQSCGKRTAVPIRQIDITHTPVYYILLDRPSLL*RTKICGRIHGNQTSPLDLSADLH 248
D G + G A+ +Q+ + H R LL TK H N T+P+
Sbjct: 356 DEGAEEAGGAVAISAQQLRMQHQRKLLEAAQREPLLLSTKAVKAEHSNYTTPIRYPYVF- 414

Query: 247 CTAVGKSSQLENKEHCGVIAKPKQELMEGLRR 152
SQLE K+H G I + L E +R
Sbjct: 415 ------DSQLEAKQHAGFIGGSRITLPENAQR 440


>tr|Q6PAV6|Q6PAV6_XENLA MGC68679 protein OS=Xenopus laevis GN=scn4b
PE=2 SV=1
Length = 238

Score = 33.9 bits (76), Expect = 7.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3

Query: 366 VISICLMGTAVLFPHDCLPISKSRSRNNFTDGFSGSPVAIDSPFQLFDSFDQARHSF 536
++++C + VLF H CLP+ S +NN +GS V + F F S+
Sbjct: 20 LVALCFI---VLFAHSCLPLEVSVGKNNLITAINGSNVTLPCTFMACIGFSGVTFSW 73


>tr|B5QIV3|B5QIV3_CAMJE Putative transposase OS=Campylobacter jejuni
subsp. jejuni CG8421 GN=Cj8421_0822 PE=4 SV=1
Length = 430

Score = 33.9 bits (76), Expect = 7.0
Identities = 16/53 (30%), Positives = 32/53 (60%)
Frame = -2

Query: 238 VGKSSQLENKEHCGVIAKPKQELMEGLRRNGVYANAQARGMQIHREGINPRNE 80
+ ++ QL K+H AK KQE ++G++++ Y A + ++HR+ N R++
Sbjct: 227 IKRARQLSKKQH----AKTKQEALQGIKKSSNYLKASIKLNKLHRKIANIRSD 275


>tr|B5GIJ0|B5GIJ0_9ACTO Putative uncharacterized protein
OS=Streptomyces sp. SPB74 GN=SSBG_04159 PE=4 SV=1
Length = 867

Score = 33.9 bits (76), Expect = 7.0
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = -2

Query: 316 RTKICGRIHGNQT--SPLDLSADLHCTAVGKSSQLENKEHCGVIAKPKQELMEGLRRNG- 146
R + CG + Q + + L+ L CTA LE E GV+ +P+ GL + G
Sbjct: 222 RVRQCGGVVKGQRGRAAVTLARLLGCTAAAAERVLERLEEWGVVVRPRAGTGSGLGQRGR 281

Query: 145 --VYANAQARGMQI 110
V A A ARG QI
Sbjct: 282 LVVPAVAAARGGQI 295