DK955740 |
Clone id |
TST39A01NGRL0023_O13 |
Library |
TST39 |
Length |
761 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_O13. 5' end sequence. |
Accession |
DK955740 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1204Contig1 |
Sequence |
CTAGAGTAGGAACGGGGGAGAGAGTAGAGAGAGAGCGACACACACACAGAGGTGAGCATG GAGGAGAAGGTGCAATACTGGGGCAAAGCTTATGAGTGGGCGATCAAGGGCGCCCGAGCG GAGCAGGTGTGGGCCGTGACGGGCGACTTCGTGAGGATCGACAAGTGGGTGACGTCGCTG GTGCAGAGCTGCGAGCTCGTGGAAGGCGAGCCCCAGAAACCCGGATGCGTGCGAAGGCCC GTGCTCTACCCCTCCGCCCCTGGCGAGCCCTTCACATACGCCCTCGAGAAGCTTTTAGAA ATGGACGAACTCCACCATCGCTACTCCTACACCATACTAGAAGGTAGTACCCTTCCTGGC TTTTCTCTCATGCAAGACTACGTAGCCACCTTCGAGCTCTCACCCCTTCATCCCCATCTC GGCACGCTCCTGCGGTGGAGCTTTGTGTGCCACCCCGTTGCCGCGCTCTCAGAGGGGGAA GCCCAGGATATCGCTTTCACTCTTTACCAGGCTGCCATCAAAGACCTCAAGGGGCGCCTC TGCTTATCCGACGACGCCATCGACCTTCTATCCGTACATACTTGACCATCGATGATAAAT GTCATTTCGTTATTAATTGCCTTGCAACCATTGGTATTGCGTTATCTTAACGTTCTCTTG TCCCTTGCCTCTCTTTTTGTAAAACCGCAAAAAAATCCAAGTTATCCTAACTCACCTGTT TTGGAAAGTATTTGGCAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P59082 |
Definition |
sp|P59082|LFS_ALLCE Lachrymatory-factor synthase OS=Allium cepa |
Align length |
140 |
Score (bit) |
68.6 |
E-value |
3.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5BHR2 |
Definition |
tr|A5BHR2|A5BHR2_VITVI Putative uncharacterized protein (Chromosome chr4 scaffold_6, whole genome shotgun sequence) OS=Vitis vinifera |
Align length |
139 |
Score (bit) |
77.0 |
E-value |
1.0e-12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955740|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_O13, 5' (736 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5BHR2|A5BHR2_VITVI Putative uncharacterized protein (Chromos... 77 1e-12 tr|Q5JM62|Q5JM62_ORYSJ Putative uncharacterized protein P0042A10... 73 2e-11 tr|Q8H937|Q8H937_ALLPO Lachrymatory factor synthase OS=Allium am... 72 3e-11 tr|A2WUM6|A2WUM6_ORYSI Putative uncharacterized protein OS=Oryza... 69 2e-10 tr|Q8H941|Q8H941_ALLFI Lachrymatory factor synthase OS=Allium fi... 69 4e-10 tr|Q76K50|Q76K50_ALLAS Lachrymatory factor synthase OS=Allium as... 69 4e-10 tr|B6UBY7|B6UBY7_MAIZE Lachrymatory-factor synthase OS=Zea mays ... 67 9e-10 tr|Q8H942|Q8H942_ALLFI Lachrymatory factor synthase OS=Allium fi... 67 1e-09 tr|Q8H940|Q8H940_9ASPA Lachrymatory factor synthase OS=Allium ch... 67 1e-09 tr|A5BHR3|A5BHR3_VITVI Putative uncharacterized protein OS=Vitis... 66 2e-09 tr|Q8H939|Q8H939_ALLPO Lachrymatory factor synthase OS=Allium po... 65 4e-09 tr|A7P554|A7P554_VITVI Chromosome chr4 scaffold_6, whole genome ... 65 4e-09 tr|Q8H938|Q8H938_ALLPO Lachrymatory factor synthase OS=Allium po... 65 5e-09 tr|B6TSX0|B6TSX0_MAIZE Putative uncharacterized protein OS=Zea m... 65 5e-09 tr|B4FV72|B4FV72_MAIZE Putative uncharacterized protein OS=Zea m... 65 6e-09 tr|A9PJ81|A9PJ81_POPJC Putative uncharacterized protein OS=Popul... 64 1e-08 tr|A7PEI3|A7PEI3_VITVI Chromosome chr11 scaffold_13, whole genom... 61 7e-08 tr|Q9M073|Q9M073_ARATH Putative uncharacterized protein AT4g3287... 60 2e-07 tr|B6TW34|B6TW34_MAIZE Lachrymatory factor synthase OS=Zea mays ... 59 3e-07 tr|Q6L4Q2|Q6L4Q2_ORYSJ Putative uncharacterized protein P0708D12... 54 1e-05 tr|A9RBN8|A9RBN8_PHYPA Predicted protein OS=Physcomitrella paten... 54 1e-05 tr|A2Y1C9|A2Y1C9_ORYSI Putative uncharacterized protein OS=Oryza... 54 1e-05 tr|O82320|O82320_ARATH Putative uncharacterized protein At2g2577... 50 2e-04 tr|A4FLF4|A4FLF4_SACEN Putative uncharacterized protein OS=Sacch... 49 3e-04 tr|Q7WHC1|Q7WHC1_BORBR Putative uncharacterized protein OS=Borde... 47 0.001 tr|Q7W9E1|Q7W9E1_BORPA Putative uncharacterized protein OS=Borde... 47 0.001 tr|Q7VYV2|Q7VYV2_BORPE Putative uncharacterized protein OS=Borde... 47 0.001 tr|B6TUP7|B6TUP7_MAIZE Lachrymatory-factor synthase OS=Zea mays ... 47 0.001 tr|A9RW83|A9RW83_PHYPA Predicted protein OS=Physcomitrella paten... 47 0.001 tr|A5EKZ2|A5EKZ2_BRASB Putative uncharacterized protein OS=Brady... 47 0.002
>tr|A5BHR2|A5BHR2_VITVI Putative uncharacterized protein (Chromosome chr4 scaffold_6, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00032406001 PE=4 SV=1 Length = 163
Score = 77.0 bits (188), Expect = 1e-12 Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 5/139 (3%) Frame = +1
Query: 58 MEEKVQY-WGKAYEWAIKGARAEQVWAVTGDFVRIDKWVTSLVQSCELVEGEPQKPGCVR 234 M E+ Q+ W +K + +QVW DF + KW+ SL +C VEG +PG +R Sbjct: 1 MAEETQFKWEGKATAELKSTKPDQVWPFLEDFCSLHKWMPSL-DTCYQVEGVKGQPGLIR 59
Query: 235 RPVLYPSAPGEP----FTYALEKLLEMDELHHRYSYTILEGSTLPGFSLMQDYVATFELS 402 ++P P + EKLL +D ++H +SY +L+ + GF+ YV TF++ Sbjct: 60 YCSSTAASPDNPDQTTVNWVKEKLLTIDPINHCFSYEVLDNNM--GFN---SYVTTFKVI 114
Query: 403 PLHPHLGTLLRWSFVCHPV 459 P++ G L++WSFVC PV Sbjct: 115 PINGG-GCLIQWSFVCDPV 132
>tr|Q5JM62|Q5JM62_ORYSJ Putative uncharacterized protein P0042A10.2 (Putative uncharacterized protein) (Putative uncharacterized protein P0022F10.27) OS=Oryza sativa subsp. japonica GN=P0042A10.2 PE=4 SV=1 Length = 222
Score = 72.8 bits (177), Expect = 2e-11 Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 5/136 (3%) Frame = +1
Query: 79 WGKAYEWAIKGARAEQVWAVTGDFVRIDKWVTSLVQSCELVEGEPQKPGCVRRPVLYPSA 258 W + A++G +Q WA+ GDF + +WV S VQ+C VEG +PGCVR Y + Sbjct: 72 WHGSVRAAVEGPTPDQAWALLGDFCSLHRWVPS-VQTCRRVEGAEGQPGCVR----YCAG 126
Query: 259 PGEPFTYAL-----EKLLEMDELHHRYSYTILEGSTLPGFSLMQDYVATFELSPLHPHLG 423 P A+ E+L+E D + RYSY ++E T GF Y AT + P G Sbjct: 127 PVNKAAEAVAGWSKERLVEFDPVARRYSYEVVE--TNKGFG---RYAATLRVEP--DPAG 179
Query: 424 TLLRWSFVCHPVAALS 471 + WSF PV S Sbjct: 180 CAVAWSFEADPVRGWS 195
>tr|Q8H937|Q8H937_ALLPO Lachrymatory factor synthase OS=Allium ampeloprasum var. holmense GN=lfs PE=2 SV=1 Length = 169
Score = 72.4 bits (176), Expect = 3e-11 Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 2/146 (1%) Frame = +1
Query: 61 EEKVQYWGKAYEWAIKGARAEQVWAVTGDFVRIDKWVTSLVQSCELVEGEPQKPGCVR-- 234 +E ++ GKAY + + E W + DF+ + K + SL CELVEGE GCVR Sbjct: 16 KEAPKWKGKAYA-LLPNTKPEHAWKLLKDFINLHKTMPSL-SVCELVEGEVNAVGCVRHV 73
Query: 235 RPVLYPSAPGEPFTYALEKLLEMDELHHRYSYTILEGSTLPGFSLMQDYVATFELSPLHP 414 + +++P E +A EKL+ +D+ YSY E F+ +DY AT ++ Sbjct: 74 KGIMHPM---EQEFWAKEKLVAVDDKAMSYSYIFTEC-----FTGYEDYTATMQIMDGCE 125
Query: 415 HLGTLLRWSFVCHPVAALSEGEAQDI 492 H G+ WSF C+ + ++E DI Sbjct: 126 HKGSRFEWSFQCNYIEGMTESAFTDI 151
>tr|A2WUM6|A2WUM6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03580 PE=4 SV=1 Length = 164
Score = 69.3 bits (168), Expect = 2e-10 Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 5/127 (3%) Frame = +1
Query: 79 WGKAYEWAIKGARAEQVWAVTGDFVRIDKWVTSLVQSCELVEGEPQKPGCVRRPVLYPSA 258 W + A++G +Q WA+ GDF + +WV S VQ+C VEG +PGCVR Y + Sbjct: 14 WHGSVRAAVEGPTPDQAWALLGDFCSLHRWVPS-VQTCRRVEGAEGQPGCVR----YCAG 68
Query: 259 PGEPFTYAL-----EKLLEMDELHHRYSYTILEGSTLPGFSLMQDYVATFELSPLHPHLG 423 P A+ E+L+E D + RYSY ++E T GF Y AT + P G Sbjct: 69 PVNKAAEAVAGWSKERLVEFDPVARRYSYEVVE--TNKGFG---RYAATLRVEP--DPAG 121
Query: 424 TLLRWSF 444 + WSF Sbjct: 122 CAVAWSF 128
>tr|Q8H941|Q8H941_ALLFI Lachrymatory factor synthase OS=Allium fistulosum GN=lfs PE=2 SV=1 Length = 169
Score = 68.6 bits (166), Expect = 4e-10 Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 2/140 (1%) Frame = +1
Query: 79 WGKAYEWAIKGARAEQVWAVTGDFVRIDKWVTSLVQSCELVEGEPQKPGCVR--RPVLYP 252 W + ++ EQ W + DF+ + K + SL CELVEGE GCVR + +++P Sbjct: 21 WSGKVHALLPNSKPEQAWRLLKDFINLHKIMPSL-SVCELVEGEANVVGCVRHVKGIMHP 79
Query: 253 SAPGEPFTYALEKLLEMDELHHRYSYTILEGSTLPGFSLMQDYVATFELSPLHPHLGTLL 432 E +A EKL+ +D + YSY E T GF +DY AT ++ H G Sbjct: 80 I---EEEFWAKEKLVALDNKNMSYSYIFTECFT--GF---EDYTATMQIVEGPEHKGCRF 131
Query: 433 RWSFVCHPVAALSEGEAQDI 492 WSF C + ++E +I Sbjct: 132 DWSFQCKYIEGMTESAFAEI 151
>tr|Q76K50|Q76K50_ALLAS Lachrymatory factor synthase OS=Allium ascalonicum GN=lfs PE=2 SV=1 Length = 169
Score = 68.6 bits (166), Expect = 4e-10 Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 2/140 (1%) Frame = +1
Query: 79 WGKAYEWAIKGARAEQVWAVTGDFVRIDKWVTSLVQSCELVEGEPQKPGCVR--RPVLYP 252 W + + EQ W + DF+ + K + SL CELVEGE GCVR + +++P Sbjct: 21 WSGKVHALLPNTKPEQAWTLLKDFINLHKVMPSL-SVCELVEGEANVVGCVRYVKGIMHP 79
Query: 253 SAPGEPFTYALEKLLEMDELHHRYSYTILEGSTLPGFSLMQDYVATFELSPLHPHLGTLL 432 E +A EKL+ +D + YSY E F+ +DY AT ++ H G+ Sbjct: 80 I---EEEFWAKEKLVALDNKNMSYSYIFTEC-----FTGYEDYTATMQIVEGPEHKGSRF 131
Query: 433 RWSFVCHPVAALSEGEAQDI 492 WSF C + ++E +I Sbjct: 132 DWSFQCKYIEGMTESAFTEI 151
>tr|B6UBY7|B6UBY7_MAIZE Lachrymatory-factor synthase OS=Zea mays PE=2 SV=1 Length = 177
Score = 67.4 bits (163), Expect = 9e-10 Identities = 51/152 (33%), Positives = 68/152 (44%), Gaps = 13/152 (8%) Frame = +1
Query: 43 HTEVSMEEKVQYWGKAYEWAIKGARAEQVWAVTGDFVRIDKWVTSLVQSCELVE------ 204 H E W G ++ WA+ GDF + +WV S V++C VE Sbjct: 3 HDASRQEAAAAVWRGTVRAVASGPTPDEAWALLGDFCSLHRWV-STVRACRRVEVEGAAA 61
Query: 205 GEPQK-----PGCVR--RPVLYPSAPGEPFTYALEKLLEMDELHHRYSYTILEGSTLPGF 363 EP+ PGCVR + +APGE ++ E+LLEMD YSY +LE + GF Sbjct: 62 AEPEPEGRPAPGCVRYCEGPVNMAAPGELVGWSKERLLEMDHAGRWYSYELLESN--KGF 119
Query: 364 SLMQDYVATFELSPLHPHLGTLLRWSFVCHPV 459 Y AT + H G +RWSF PV Sbjct: 120 G---RYRATVRVE--HDPAGCAVRWSFEADPV 146
>tr|Q8H942|Q8H942_ALLFI Lachrymatory factor synthase OS=Allium fistulosum GN=lfs PE=2 SV=1 Length = 169
Score = 67.0 bits (162), Expect = 1e-09 Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 2/140 (1%) Frame = +1
Query: 79 WGKAYEWAIKGARAEQVWAVTGDFVRIDKWVTSLVQSCELVEGEPQKPGCVR--RPVLYP 252 W + ++ EQ W + DF+ + K + SL CELVEG+ GCVR + +++P Sbjct: 21 WSGKVHALLPNSKPEQAWRLLKDFINLHKIMPSL-SVCELVEGKANVVGCVRHVKGIMHP 79
Query: 253 SAPGEPFTYALEKLLEMDELHHRYSYTILEGSTLPGFSLMQDYVATFELSPLHPHLGTLL 432 E +A EKL+ +D + YSY E T GF +DY AT ++ H G Sbjct: 80 I---EEEFWAKEKLVALDNKNMSYSYIFTECFT--GF---EDYTATMQIVEGPEHKGCRF 131
Query: 433 RWSFVCHPVAALSEGEAQDI 492 WSF C + ++E +I Sbjct: 132 DWSFQCKYIEGMTESAFAEI 151
>tr|Q8H940|Q8H940_9ASPA Lachrymatory factor synthase OS=Allium chinense GN=lfs PE=2 SV=1 Length = 169
Score = 67.0 bits (162), Expect = 1e-09 Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 2/140 (1%) Frame = +1
Query: 79 WGKAYEWAIKGARAEQVWAVTGDFVRIDKWVTSLVQSCELVEGEPQKPGCVR--RPVLYP 252 W + + EQ W + DF+ + K + SL CELVEGE GCVR + +++P Sbjct: 21 WRGKVHALLPNTKPEQAWTLLKDFINLHKIMPSL-SVCELVEGEANVVGCVRHVKGIMHP 79
Query: 253 SAPGEPFTYALEKLLEMDELHHRYSYTILEGSTLPGFSLMQDYVATFELSPLHPHLGTLL 432 E +A EKL+ +D+ + SY +E F+ +DY AT ++ H G Sbjct: 80 M---EEEFWAKEKLVALDDKNMSCSYIFVEC-----FTGYEDYTATMQIVEGSEHKGCRF 131
Query: 433 RWSFVCHPVAALSEGEAQDI 492 WSF C + ++E D+ Sbjct: 132 DWSFQCKYIEGMTESAFTDV 151
>tr|A5BHR3|A5BHR3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034796 PE=4 SV=1 Length = 172
Score = 66.2 bits (160), Expect = 2e-09 Identities = 57/176 (32%), Positives = 76/176 (43%), Gaps = 8/176 (4%) Frame = +1
Query: 40 THTEVS-MEEKVQYWGKAYEWAIKGARAEQVWAVTGDFVRIDKWVTSLVQSCELVEGEPQ 216 TH S MEE W +K +QVW + DF I KW L S + VEGE Sbjct: 5 THISPSLMEEPEPRWEGKATAELKTTAPDQVWPLLEDFCGIHKWFPDLDTSYQ-VEGEKG 63
Query: 217 KPGCVRRPVLYPSAPGEPFTYALEKLLEMDELHHRYSYTILEGSTLPGFSLMQDYVATFE 396 KPG R P G +A EKLL MD + +SY +L+ + GF+ YVAT + Sbjct: 64 KPGLTRYCANNPGESG--VKWAKEKLLTMDPIQRCFSYEVLDNNI--GFN---SYVATIK 116
Query: 397 LSPLHPHLGTLLRWSFVCHPVAALSEGEAQDIAFTLYQ-------AAIKDLKGRLC 543 + P+ G + WSF P+ + + Q AAIK+ G C Sbjct: 117 VLPVDGG-GCRIEWSFASGPIEGWRSDDLGSFVDSCLQFMAKKMEAAIKNEDGSSC 171
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