DK955747 |
Clone id |
TST39A01NGRL0023_O20 |
Library |
TST39 |
Length |
575 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_O20. 5' end sequence. |
Accession |
DK955747 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GTCGATCCCATTTGAAAACACTCGTGCCAAATAGTGCGGAGGATGCGCACATGCTCGGAA CAATGGTATCCTCGGAGTTGCTCTCGAGTACTTGTGCATCAACCTCCTCGACGATTTTCT CGCTTTCCTCTTCATCGCCATTGAAGCCTCCTCCTTACTGTCGACTGACCTTCGGCTCTC AGAATTCAATCCCCTTGCGCCTCCATTGGCCCCACTTTGCCCCTACGCAGAAGCGCATCT GTTTCAAGTTCTTCTCGAACAGAATCATGGCTGCAGTCTCGCTTGAACTTGGCATGAAGA CTTACAAGCTTTCTGAACTCAATGATACCGAACTGAGAAGCCTCAGAGAGCGCCCGCGCA TAGATTTTTCATCAATCTTTCAAATAGTGAGCCCCATAGTAGAGGATGTTCGAACTCGGG GGGATTCTGCAGTGATTGATTATACTGCTAAATTTGATGGGGTACAAATCGATAGCGTGC TTGAATCAGTGGCAGATTTACCAGATCCCAAGATTGACGCAGATGTGAAGGCTGCTTTTG ACGTAGCATATGATAACATATATGCCTTTCATGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5NAY4 |
Definition |
sp|Q5NAY4|HISX_ORYSJ Histidinol dehydrogenase, chloroplastic OS=Oryza sativa subsp. japonica |
Align length |
93 |
Score (bit) |
128.0 |
E-value |
2.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955747|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_O20, 5' (575 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q5NAY4|HISX_ORYSJ Histidinol dehydrogenase, chloroplastic OS=... 128 2e-29 sp|Q9C5U8|HISX_ARATH Histidinol dehydrogenase, chloroplastic OS=... 118 2e-26 sp|P24226|HISX_BRAOC Histidinol dehydrogenase, chloroplastic OS=... 117 5e-26 sp|Q9P777|HISX_SCHPO Histidinol dehydrogenase OS=Schizosaccharom... 70 1e-11 sp|P60862|HISX_METMP Histidinol dehydrogenase OS=Methanococcus m... 68 4e-11 sp|P07685|HIS2_NEUCR Histidine biosynthesis trifunctional protei... 61 3e-09 sp|O33775|HISX_SULSO Histidinol dehydrogenase OS=Sulfolobus solf... 61 5e-09 sp|Q12670|HIS2_SACBA Histidine biosynthesis trifunctional protei... 61 5e-09 sp|P62459|HISX_PHOPR Histidinol dehydrogenase OS=Photobacterium ... 60 8e-09 sp|Q8F393|HISX_LEPIN Histidinol dehydrogenase OS=Leptospira inte... 60 8e-09 sp|P62458|HISX_LEPIC Histidinol dehydrogenase OS=Leptospira inte... 60 8e-09 sp|P45353|HIS2_PICPA Histidine biosynthesis trifunctional protei... 59 2e-08 sp|O74712|HIS2_CANAL Histidine biosynthesis trifunctional protei... 59 2e-08 sp|P00815|HIS2_YEAST Histidine biosynthesis trifunctional protei... 58 4e-08 sp|Q58851|HISX_METJA Histidinol dehydrogenase OS=Methanocaldococ... 57 5e-08 sp|Q6D411|HISX_ERWCT Histidinol dehydrogenase OS=Erwinia carotov... 55 2e-07 sp|O13471|HIS2_KLULA Histidine biosynthesis trifunctional protei... 55 2e-07 sp|Q5E638|HISX_VIBF1 Histidinol dehydrogenase OS=Vibrio fischeri... 55 3e-07 sp|Q4J8I8|HISX_SULAC Histidinol dehydrogenase OS=Sulfolobus acid... 55 3e-07 sp|Q87QL1|HISX_VIBPA Histidinol dehydrogenase OS=Vibrio parahaem... 54 7e-07 sp|O30027|HISX_ARCFU Histidinol dehydrogenase OS=Archaeoglobus f... 53 1e-06 sp|Q483H8|HISX2_COLP3 Histidinol dehydrogenase 2 OS=Colwellia ps... 53 1e-06 sp|Q5WDH8|HISX2_BACSK Histidinol dehydrogenase 2 OS=Bacillus cla... 53 1e-06 sp|Q8D8Q0|HISX_VIBVU Histidinol dehydrogenase OS=Vibrio vulnific... 52 2e-06 sp|Q7MLS6|HISX_VIBVY Histidinol dehydrogenase OS=Vibrio vulnific... 52 2e-06 sp|Q82AA6|HISX_STRAW Histidinol dehydrogenase OS=Streptomyces av... 52 3e-06 sp|Q9RQ82|HISX_BUCMH Histidinol dehydrogenase (Fragment) OS=Buch... 52 3e-06 sp|Q970Y9|HISX_SULTO Histidinol dehydrogenase OS=Sulfolobus toko... 51 4e-06 sp|P59398|HISX_BUCBP Histidinol dehydrogenase OS=Buchnera aphidi... 51 4e-06 sp|P28736|HISX_MYCSM Histidinol dehydrogenase OS=Mycobacterium s... 51 5e-06
>sp|Q5NAY4|HISX_ORYSJ Histidinol dehydrogenase, chloroplastic OS=Oryza sativa subsp. japonica GN=HDH PE=2 SV=1 Length = 473
Score = 128 bits (321), Expect = 2e-29 Identities = 63/93 (67%), Positives = 75/93 (80%) Frame = +3
Query: 294 MKTYKLSELNDTELRSLRERPRIDFSSIFQIVSPIVEDVRTRGDSAVIDYTAKFDGVQID 473 MK+Y+LSEL+D E+ L+ RPRIDFSSIF V+PIVEDVR RGD+AV DYT KFD V +D Sbjct: 39 MKSYRLSELSDAEVGGLKARPRIDFSSIFGTVNPIVEDVRMRGDAAVKDYTVKFDKVALD 98
Query: 474 SVLESVADLPDPKIDADVKAAFDVAYDNIYAFH 572 V+ V+DLPD ++D VK AFDVAYDNIYAFH Sbjct: 99 DVVVRVSDLPDVELDPAVKEAFDVAYDNIYAFH 131
>sp|Q9C5U8|HISX_ARATH Histidinol dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=HDH PE=2 SV=1 Length = 466
Score = 118 bits (295), Expect = 2e-26 Identities = 54/93 (58%), Positives = 78/93 (83%) Frame = +3
Query: 294 MKTYKLSELNDTELRSLRERPRIDFSSIFQIVSPIVEDVRTRGDSAVIDYTAKFDGVQID 473 MK+Y+LSEL+ +++ SL+ RPRIDFSSIF V+PI++ VR+ GD+AV +YT +FD VQ++ Sbjct: 32 MKSYRLSELSSSQVDSLKSRPRIDFSSIFATVNPIIDAVRSNGDNAVKEYTERFDKVQLN 91
Query: 474 SVLESVADLPDPKIDADVKAAFDVAYDNIYAFH 572 V+E +++L P++D++VK AFDVAYDNIYAFH Sbjct: 92 KVVEDMSELSVPELDSNVKEAFDVAYDNIYAFH 124
>sp|P24226|HISX_BRAOC Histidinol dehydrogenase, chloroplastic OS=Brassica oleracea var. capitata GN=HDH PE=1 SV=1 Length = 469
Score = 117 bits (292), Expect = 5e-26 Identities = 54/93 (58%), Positives = 78/93 (83%) Frame = +3
Query: 294 MKTYKLSELNDTELRSLRERPRIDFSSIFQIVSPIVEDVRTRGDSAVIDYTAKFDGVQID 473 MK+Y+LSEL+ +++ +L+ RPRIDFSSIF V+PI++ VR++GD+AV +YT +FD VQ++ Sbjct: 33 MKSYRLSELSFSQVENLKARPRIDFSSIFTTVNPIIDAVRSKGDTAVKEYTERFDKVQLN 92
Query: 474 SVLESVADLPDPKIDADVKAAFDVAYDNIYAFH 572 V+E V++L P++D+ VK AFDVAYDNIYAFH Sbjct: 93 KVVEDVSELDIPELDSAVKEAFDVAYDNIYAFH 125
>sp|Q9P777|HISX_SCHPO Histidinol dehydrogenase OS=Schizosaccharomyces pombe GN=his2 PE=2 SV=1 Length = 439
Score = 69.7 bits (169), Expect = 1e-11 Identities = 38/98 (38%), Positives = 62/98 (63%), Gaps = 1/98 (1%) Frame = +3
Query: 285 ELGMKTYKLSELNDTELRSLRERPRIDFSSIFQIVSPIVEDVRTRGDSAVIDYTAKFDGV 464 E+ + +Y+ + L E L RP + I IV PI+EDV++RG++++IDY +KF+ V Sbjct: 5 EIQVPSYRAAALTAEERTRLLARPIQNTQKIRTIVQPIIEDVKSRGEASLIDYASKFEKV 64
Query: 465 QIDS-VLESVADLPDPKIDADVKAAFDVAYDNIYAFHA 575 Q+ S VL++ D KI +K D+A++NI+AFH+ Sbjct: 65 QLKSAVLKAPFDDDLMKISPMIKEDIDIAFNNIFAFHS 102
>sp|P60862|HISX_METMP Histidinol dehydrogenase OS=Methanococcus maripaludis GN=hisD PE=3 SV=1 Length = 424
Score = 67.8 bits (164), Expect = 4e-11 Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 2/91 (2%) Frame = +3
Query: 306 KLSELNDTELRSLRERPRIDFSSIFQIVSPIVEDVRTRGDSAVIDYTAKFDGVQIDSVLE 485 K+S+LN+ EL + R + + S I VS I+E+V+ GD+A+ +YT KFDGV ID+ Sbjct: 5 KISKLNEKELDIILNRNKTNISGILPTVSEILENVQKNGDNALKEYTKKFDGVDIDNFKV 64
Query: 486 SVADLPD--PKIDADVKAAFDVAYDNIYAFH 572 S ++ KID+ V + + AY+NI FH Sbjct: 65 STEEIDKAYDKIDSKVVESLEKAYENIREFH 95
>sp|P07685|HIS2_NEUCR Histidine biosynthesis trifunctional protein OS=Neurospora crassa GN=his-3 PE=3 SV=3 Length = 870
Score = 61.2 bits (147), Expect = 3e-09 Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 5/102 (4%) Frame = +3
Query: 285 ELGMKTYKLSELNDTELRSLRERPRIDFS-SIFQIVSPIVEDVRTRGDSAVIDYTAKFDG 461 ++ M+ + S+++ EL + +RP S +I++I+ PI+EDVR GD AV+ YT KF+ Sbjct: 429 KITMRRFDASKVSTEELDAALKRPAQKSSDAIYKIIVPIIEDVRKNGDKAVLSYTHKFE- 487
Query: 462 VQIDSVLESVADLPDPK----IDADVKAAFDVAYDNIYAFHA 575 + S+ V P PK + + AA DV+++NI FHA Sbjct: 488 -KATSLTSPVLKAPFPKELMQLPEETIAAIDVSFENIRKFHA 528
>sp|O33775|HISX_SULSO Histidinol dehydrogenase OS=Sulfolobus solfataricus GN=hisD PE=3 SV=1 Length = 398
Score = 60.8 bits (146), Expect = 5e-09 Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 2/77 (2%) Frame = +3
Query: 348 ERPRIDFSSIFQIVSPIVEDVRTRGDSAVIDYTAKFDGVQIDSVLESVADLPD--PKIDA 521 ERP DFS + +V I+E V+T+GD+A+ + T K D V+ID++ +L K+D Sbjct: 9 ERPN-DFSRVIPVVKDIIESVKTKGDNALYELTEKLDKVKIDNIKAREEELKTQASKLDP 67
Query: 522 DVKAAFDVAYDNIYAFH 572 VK A D AY+ + AFH Sbjct: 68 KVKQAIDTAYEQLKAFH 84
>sp|Q12670|HIS2_SACBA Histidine biosynthesis trifunctional protein OS=Saccharomyces bayanus GN=HIS2 PE=3 SV=1 Length = 799
Score = 60.8 bits (146), Expect = 5e-09 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 5/86 (5%) Frame = +3
Query: 333 LRSLRERPRIDFSSIFQIVSPIVEDVRTRGDSAVIDYTAKFDGVQIDSVLESVADLPDPK 512 ++ RP S I +V+PI+E+VR RGDSA+++YT KFDGV++ + V + P P+ Sbjct: 370 IKKALSRPIQKTSEIMHLVNPIIENVRDRGDSALLEYTEKFDGVKLST---PVLNAPFPE 426
Query: 513 -----IDADVKAAFDVAYDNIYAFHA 575 + ++K A D++ +N+ FHA Sbjct: 427 EYFEGLTEEMKDALDLSIENVRKFHA 452
>sp|P62459|HISX_PHOPR Histidinol dehydrogenase OS=Photobacterium profundum GN=hisD PE=3 SV=1 Length = 443
Score = 60.1 bits (144), Expect = 8e-09 Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 3/96 (3%) Frame = +3
Query: 294 MKTYKLSELNDTELRSLRERPRI-DFSSIFQIVSPIVEDVRTRGDSAVIDYTAKFDGVQI 470 MKT L++ + SL +RP I + ++I IV+ +V DVR RGD A+++ T KFD V+ Sbjct: 1 MKTVVWQSLSENQQESLLQRPAITEGANITAIVADVVADVRQRGDEALLELTEKFDRVRP 60
Query: 471 DS--VLESVADLPDPKIDADVKAAFDVAYDNIYAFH 572 DS V E ++ ++K A AY NI FH Sbjct: 61 DSIRVSEQEVTAATSRLSDNMKQALQQAYQNIATFH 96
>sp|Q8F393|HISX_LEPIN Histidinol dehydrogenase OS=Leptospira interrogans GN=hisD PE=3 SV=1 Length = 427
Score = 60.1 bits (144), Expect = 8e-09 Identities = 36/95 (37%), Positives = 51/95 (53%) Frame = +3
Query: 288 LGMKTYKLSELNDTELRSLRERPRIDFSSIFQIVSPIVEDVRTRGDSAVIDYTAKFDGVQ 467 + ++ +K+ + + L + +R R D SS +V PIVEDV+ RGDSA+ +YT KFD V Sbjct: 1 MAIQIFKVGLKDHSVLDPVLKRAREDLSSTLALVKPIVEDVKNRGDSALREYTQKFDEVI 60
Query: 468 IDSVLESVADLPDPKIDADVKAAFDVAYDNIYAFH 572 +PKID +K A A NI FH Sbjct: 61 PPKSFVLEISKLNPKIDPKLKTALVKAAKNIRNFH 95
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NV24 |
Definition |
tr|A9NV24|A9NV24_PICSI Histidinol dehydrogenase OS=Picea sitchensis |
Align length |
94 |
Score (bit) |
138.0 |
E-value |
2.0e-31 |
Report |
|