DK955749 |
Clone id |
TST39A01NGRL0023_O22 |
Library |
TST39 |
Length |
546 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_O22. 5' end sequence. |
Accession |
DK955749 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
TAAAGTTGGAAGATAAGCGCACAGGACTTCCTTCCATGACCGCGGCCACAACATCAAATA CCGCCAGCACAGGCGACTGGCCGTCGTTTTACAACCTCGATCCCCCTCCGATGATGCCAT CCCCTTCTCCACCCCTGGAGCTTCAGTTCCTGCCCCCTTCTGCGGCTGCCGCTGCCGCTG CCGCTGCCGCTGCCGCTTCTTCTGCAACACGCCCCCCAGCTGCCTCCCCTTGGACTGTCG ACCCCTCGCGCCTACAAAAGCTCATGATGGGTACTGTGGCTGTTGTGCCCCCCTCTCCGG GGCCTTCTAGCTTTATTGGCAGTCGTGCCCCCGTCTCAGACTTTGGTGCCTTCTTTGACC CGGGGATTAACAAACCTCTCCCATCTGGATGGGAACGCTGCCTCGATCTCAAGTCAGGCG AAGTCTTCATCAAGAAGTGTGAAATGATGACAAACAAAACAGGGAACTTACCAAGAATGG CCTGTTTGGCTATCCACACAATCGAGTGACATGAAGCAACAATTGTGCAAAGAGCGAGAA AAAACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O43451 |
Definition |
sp|O43451|MGA_HUMAN Maltase-glucoamylase, intestinal OS=Homo sapiens |
Align length |
69 |
Score (bit) |
31.2 |
E-value |
3.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SNJ8 |
Definition |
tr|A9SNJ8|A9SNJ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
43 |
Score (bit) |
39.3 |
E-value |
0.14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955749|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_O22, 5' (546 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SNJ8|A9SNJ8_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.14 tr|A9SJA2|A9SJA2_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.23 tr|A9RXE4|A9RXE4_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.23 tr|A9RQ85|A9RQ85_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.23 tr|A5C6B2|A5C6B2_VITVI Putative uncharacterized protein OS=Vitis... 38 0.31 tr|A9RXE5|A9RXE5_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.52 tr|A9TP00|A9TP00_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.68 tr|A9SNJ7|A9SNJ7_PHYPA Predicted protein OS=Physcomitrella paten... 36 1.2 tr|A1SL93|A1SL93_NOCSJ Putative uncharacterized protein OS=Nocar... 36 1.5 tr|A9S7A2|A9S7A2_PHYPA Predicted protein OS=Physcomitrella paten... 35 2.0 tr|A7QD65|A7QD65_VITVI Chromosome undetermined scaffold_80, whol... 35 2.0 tr|Q53ME9|Q53ME9_ORYSJ Os11g0294400 protein OS=Oryza sativa subs... 35 2.6 tr|A2ZDI6|A2ZDI6_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.6 tr|A9SJA3|A9SJA3_PHYPA Predicted protein OS=Physcomitrella paten... 35 3.4 tr|Q2QVE4|Q2QVE4_ORYSJ WW domain containing protein, expressed O... 34 4.4 tr|B4FLZ3|B4FLZ3_MAIZE Putative uncharacterized protein OS=Zea m... 34 4.4 tr|B4FDG6|B4FDG6_MAIZE Putative uncharacterized protein OS=Zea m... 34 4.4 tr|A9S1S0|A9S1S0_PHYPA Predicted protein OS=Physcomitrella paten... 34 4.4 tr|A9RL97|A9RL97_PHYPA Predicted protein OS=Physcomitrella paten... 34 4.4 tr|A2ZJ82|A2ZJ82_ORYSI Putative uncharacterized protein OS=Oryza... 34 4.4 tr|B6U8S2|B6U8S2_MAIZE WW domain containing protein OS=Zea mays ... 34 5.8 tr|B6TZL4|B6TZL4_MAIZE Putative uncharacterized protein OS=Zea m... 33 9.9 tr|B6TK82|B6TK82_MAIZE Putative uncharacterized protein OS=Zea m... 33 9.9 tr|A7Q9R8|A7Q9R8_VITVI Chromosome chr5 scaffold_67, whole genome... 33 9.9
>tr|A9SNJ8|A9SNJ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165909 PE=4 SV=1 Length = 688
Score = 39.3 bits (90), Expect = 0.14 Identities = 19/43 (44%), Positives = 26/43 (60%) Frame = +3
Query: 357 DPGINKPLPSGWERCLDLKSGEVFIKKCEMMTNKTGNLPRMAC 485 DP +PLPSGWE+CLDLK+G+++ + N PR C Sbjct: 387 DPS-EEPLPSGWEKCLDLKTGKLYYVNKSSGVSSLDN-PRKRC 427
>tr|A9SJA2|A9SJA2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_80180 PE=4 SV=1 Length = 432
Score = 38.5 bits (88), Expect = 0.23 Identities = 13/19 (68%), Positives = 19/19 (100%) Frame = +3
Query: 375 PLPSGWERCLDLKSGEVFI 431 P+PSGWE+CLDLK+G++F+ Sbjct: 88 PVPSGWEKCLDLKTGKLFL 106
>tr|A9RXE4|A9RXE4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_71801 PE=4 SV=1 Length = 440
Score = 38.5 bits (88), Expect = 0.23 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%) Frame = +3
Query: 327 APVSDFGAFFDPGINKPLPSGWERCLDLKSGEV-FIKKC 440 AP S DP +PLPS WE+CLDLK+G++ ++ KC Sbjct: 79 APTSPEFLELDPS-EEPLPSVWEKCLDLKTGKLYYVNKC 116
>tr|A9RQ85|A9RQ85_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_160384 PE=4 SV=1 Length = 518
Score = 38.5 bits (88), Expect = 0.23 Identities = 15/29 (51%), Positives = 24/29 (82%), Gaps = 1/29 (3%) Frame = +3
Query: 372 KPLPSGWERCLDLKSGEV-FIKKCEMMTN 455 +PLPS WE+CLDLK+G++ F+ +C +T+ Sbjct: 171 EPLPSHWEKCLDLKTGDLYFVNRCTGVTS 199
>tr|A5C6B2|A5C6B2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030980 PE=4 SV=1 Length = 220
Score = 38.1 bits (87), Expect = 0.31 Identities = 14/35 (40%), Positives = 27/35 (77%) Frame = +3
Query: 357 DPGINKPLPSGWERCLDLKSGEVFIKKCEMMTNKT 461 D ++ +P+GWE+ LDLKSG+V++++C+ + K+ Sbjct: 43 DLDLDLQVPTGWEKRLDLKSGKVYVQRCKSPSPKS 77
>tr|A9RXE5|A9RXE5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_71802 PE=4 SV=1 Length = 454
Score = 37.4 bits (85), Expect = 0.52 Identities = 14/19 (73%), Positives = 17/19 (89%) Frame = +3
Query: 378 LPSGWERCLDLKSGEVFIK 434 LPSGWE+CLDLKSG ++ K Sbjct: 33 LPSGWEKCLDLKSGLIYFK 51
>tr|A9TP00|A9TP00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_171133 PE=4 SV=1 Length = 932
Score = 37.0 bits (84), Expect = 0.68 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 15/81 (18%) Frame = +3
Query: 231 WTVDPSRLQKLMMGT--------VAVVXXXXXXXXXXXXRAPV-------SDFGAFFDPG 365 W D +L + MMG V V +PV + F + Sbjct: 549 WGADTEKLMQFMMGQFGSSSSSGVKQVEVTLDLLGTAAGSSPVRGSELDCNSSAEFLELD 608
Query: 366 INKPLPSGWERCLDLKSGEVF 428 ++PLP+ WE+CLDLK+GE++ Sbjct: 609 PDQPLPADWEKCLDLKTGELY 629
>tr|A9SNJ7|A9SNJ7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165908 PE=4 SV=1 Length = 418
Score = 36.2 bits (82), Expect = 1.2 Identities = 13/19 (68%), Positives = 17/19 (89%) Frame = +3
Query: 378 LPSGWERCLDLKSGEVFIK 434 LPSGWE+CLDLKSG ++ + Sbjct: 93 LPSGWEKCLDLKSGLIYFR 111
>tr|A1SL93|A1SL93_NOCSJ Putative uncharacterized protein OS=Nocardioides sp. (strain BAA-499 / JS614) GN=Noca_3076 PE=4 SV=1 Length = 153
Score = 35.8 bits (81), Expect = 1.5 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = -2
Query: 404 EAAFPSRWERFVNPRVKEGTKV*DGGTTANKARRPRRGGHNSHSTH 267 ++A P+ R + + G V DGG + K+RRPRR GH+ S H Sbjct: 89 QSASPAPDPRTLQHPSRGGFTVVDGGRSGRKSRRPRRHGHSGRSGH 134
>tr|A9S7A2|A9S7A2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_75503 PE=4 SV=1 Length = 391
Score = 35.4 bits (80), Expect = 2.0 Identities = 13/18 (72%), Positives = 16/18 (88%) Frame = +3
Query: 375 PLPSGWERCLDLKSGEVF 428 PLPSGWE+CLD K GE++ Sbjct: 87 PLPSGWEKCLDPKVGELY 104
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